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Update README.md

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  1. README.md +10 -17
README.md CHANGED
@@ -31,23 +31,17 @@ The model contains three versions:
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  # Model Deployment for Private Gene Set Analysis
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  ```python
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- from transformers import logging
 
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- logging.set_verbosity_error()
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- import re
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- import torch
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- import openai
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- import numpy as np
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- import pandas as pd
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-
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- from scipy import stats
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- from rouge_score import rouge_scorer
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- from torch import Tensor
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- import tqdm
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-
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- tokenizer_test = AutoTokenizer.from_pretrained(model_path, token = 'xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx') # Your access key of hugging face
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  model_test = AutoModelForCausalLM.from_pretrained(
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- model_path, device_map='auto', token = 'xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx' # Your access key of hugging face
 
 
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  )
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  def complete_chat(system, prompt, model, tokenizer):
@@ -73,13 +67,12 @@ The model contains three versions:
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  def llama(genes):
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  genes = genes.replace("/",",").replace(" ",",")
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-
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  prompt = users(genes)
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  summary =complete_chat(system, prompt, model_test, tokenizer_test)
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  return summary
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  if __name__ == "__main__":
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- genes = "Your Gene Set Separated by comma (,)"
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  result = llama(genes)
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  print(result)
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  ```
 
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  # Model Deployment for Private Gene Set Analysis
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  ```python
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+ import transformers
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+ from transformers import AutoTokenizer, AutoModelForCausalLM
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+ tokenizer_test = AutoTokenizer.from_pretrained(
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+ model_path,
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+ token = 'xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx' # Your access key of hugging face
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+ )
 
 
 
 
 
 
 
 
 
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  model_test = AutoModelForCausalLM.from_pretrained(
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+ model_path,
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+ device_map='auto',
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+ token = 'xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx' # Your access key of hugging face
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  )
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  def complete_chat(system, prompt, model, tokenizer):
 
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  def llama(genes):
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  genes = genes.replace("/",",").replace(" ",",")
 
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  prompt = users(genes)
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  summary =complete_chat(system, prompt, model_test, tokenizer_test)
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  return summary
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  if __name__ == "__main__":
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+ genes = "Your Gene Set Separated by comma (,)!"
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  result = llama(genes)
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  print(result)
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  ```