Add model code
Browse files
model.py
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"""DenseNet121 with an MC-Dropout head for chest X-ray classification.
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The backbone is the CheXNet-standard DenseNet121. We replace the classifier
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with a Dropout -> Linear head. At inference we keep the Dropout layers active
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(see `enable_mc_dropout`) so repeated forward passes give a distribution over
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predictions -- the basis for our uncertainty estimate.
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"""
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import torch
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import torch.nn as nn
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from torchvision import models
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def build_model(num_classes: int = 1, dropout_p: float = 0.3,
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pretrained: bool = True) -> nn.Module:
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"""DenseNet121 with an MC-Dropout classifier head.
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num_classes=1 -> binary task, use with BCEWithLogitsLoss (sigmoid output).
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num_classes=N (N>1, multi-label e.g. ChestX-ray14) -> also BCEWithLogitsLoss.
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"""
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weights = models.DenseNet121_Weights.IMAGENET1K_V1 if pretrained else None
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net = models.densenet121(weights=weights)
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in_features = net.classifier.in_features
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net.classifier = nn.Sequential(
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nn.Dropout(p=dropout_p),
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nn.Linear(in_features, num_classes),
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)
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return net
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def enable_mc_dropout(model: nn.Module) -> None:
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"""Put the model in eval mode but re-activate Dropout layers.
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This is what makes MC Dropout work: BatchNorm etc. stay in eval mode
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(using running stats), while Dropout keeps sampling.
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"""
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model.eval()
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for m in model.modules():
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if isinstance(m, nn.Dropout):
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m.train()
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@torch.no_grad()
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def mc_predict(model: nn.Module, x: torch.Tensor, n_passes: int = 30):
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"""Run n stochastic forward passes.
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Returns:
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mean_prob: (B, C) predictive probability (mean over passes)
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uncertainty:(B, C) predictive std over passes (epistemic signal)
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"""
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enable_mc_dropout(model)
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probs = []
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for _ in range(n_passes):
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logits = model(x)
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probs.append(torch.sigmoid(logits))
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probs = torch.stack(probs, dim=0) # (T, B, C)
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mean_prob = probs.mean(dim=0) # (B, C)
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uncertainty = probs.std(dim=0) # (B, C)
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return mean_prob, uncertainty
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