diff --git a/nnActive_results/Dataset033_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-200__unc-mutual_information__seed-12346/config.json b/nnActive_results/Dataset033_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-200__unc-mutual_information__seed-12346/config.json new file mode 100644 index 0000000000000000000000000000000000000000..1cff805546f3cc21c17869ea98948c5d2d9d8865 --- /dev/null +++ b/nnActive_results/Dataset033_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-200__unc-mutual_information__seed-12346/config.json @@ -0,0 +1,29 @@ +{ + "patch_size": [ + 32, + 74, + 74 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 40, + "trainer": "nnActiveTrainer_200epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "mutual_information", + "aggregation": "patch", + "query_size": 200, + "query_steps": 5, + "agg_stride": 8, + "n_patch_per_image": 20, + "seed": 12346, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-200", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4 +} \ No newline at end of file diff --git a/nnActive_results/Dataset033_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-200__unc-mutual_information__seed-12346/state.json b/nnActive_results/Dataset033_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-200__unc-mutual_information__seed-12346/state.json new file mode 100644 index 0000000000000000000000000000000000000000..5d81d08abaf424c194884c3f3703108260f6672e --- /dev/null +++ b/nnActive_results/Dataset033_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-200__unc-mutual_information__seed-12346/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 33, + "name": "AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-200__unc-mutual_information__seed-12346", + "loop": 0, + "preprocess": true, + "training": false, + "get_performance": false, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset041_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-200__unc-power_pe__seed-12346/config.json b/nnActive_results/Dataset041_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-200__unc-power_pe__seed-12346/config.json new file mode 100644 index 0000000000000000000000000000000000000000..bbe9dd15b5f208b5559a0511723f3cfff3a56b2d --- /dev/null +++ b/nnActive_results/Dataset041_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-200__unc-power_pe__seed-12346/config.json @@ -0,0 +1,29 @@ +{ + "patch_size": [ + 32, + 74, + 74 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 40, + "trainer": "nnActiveTrainer_200epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "power_pe", + "aggregation": "patch", + "query_size": 200, + "query_steps": 5, + "agg_stride": 8, + "n_patch_per_image": 20, + "seed": 12346, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-200", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4 +} \ No newline at end of file diff --git a/nnActive_results/Dataset041_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-200__unc-power_pe__seed-12346/state.json b/nnActive_results/Dataset041_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-200__unc-power_pe__seed-12346/state.json new file mode 100644 index 0000000000000000000000000000000000000000..9a1d490ac9d9cb5e2c6a5609bbafa830125bc5c1 --- /dev/null +++ b/nnActive_results/Dataset041_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-200__unc-power_pe__seed-12346/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 41, + "name": "AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-200__unc-power_pe__seed-12346", + "loop": 0, + "preprocess": true, + "training": false, + "get_performance": false, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset042_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-200__unc-power_pe__seed-12347/config.json b/nnActive_results/Dataset042_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-200__unc-power_pe__seed-12347/config.json new file mode 100644 index 0000000000000000000000000000000000000000..fcf45a416794b7fc8e4aeac5dfed2d00eb60bb30 --- /dev/null +++ b/nnActive_results/Dataset042_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-200__unc-power_pe__seed-12347/config.json @@ -0,0 +1,29 @@ +{ + "patch_size": [ + 32, + 74, + 74 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 40, + "trainer": "nnActiveTrainer_200epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "power_pe", + "aggregation": "patch", + "query_size": 200, + "query_steps": 5, + "agg_stride": 8, + "n_patch_per_image": 20, + "seed": 12347, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-200", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4 +} \ No newline at end of file diff --git a/nnActive_results/Dataset042_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-200__unc-power_pe__seed-12347/state.json b/nnActive_results/Dataset042_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-200__unc-power_pe__seed-12347/state.json new file mode 100644 index 0000000000000000000000000000000000000000..92898df7a28886d69cd3536b437b216f161ea218 --- /dev/null +++ b/nnActive_results/Dataset042_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-200__unc-power_pe__seed-12347/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 42, + "name": "AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-200__unc-power_pe__seed-12347", + "loop": 0, + "preprocess": true, + "training": false, + "get_performance": false, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset056_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-200__unc-random__seed-12345/config.json b/nnActive_results/Dataset056_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-200__unc-random__seed-12345/config.json new file mode 100644 index 0000000000000000000000000000000000000000..0b66a2a234de61859c4b58a4d19e60aa838d2069 --- /dev/null +++ b/nnActive_results/Dataset056_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-200__unc-random__seed-12345/config.json @@ -0,0 +1,29 @@ +{ + "patch_size": [ + 32, + 74, + 74 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 40, + "trainer": "nnActiveTrainer_200epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "random", + "aggregation": "patch", + "query_size": 200, + "query_steps": 5, + "agg_stride": 8, + "n_patch_per_image": 20, + "seed": 12345, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-200", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4 +} \ No newline at end of file diff --git a/nnActive_results/Dataset056_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-200__unc-random__seed-12345/state.json b/nnActive_results/Dataset056_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-200__unc-random__seed-12345/state.json new file mode 100644 index 0000000000000000000000000000000000000000..b0f7cefe322f040d4a4bf9f862bb3ba66f6dafa8 --- /dev/null +++ b/nnActive_results/Dataset056_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-200__unc-random__seed-12345/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 56, + "name": "AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-200__unc-random__seed-12345", + "loop": 0, + "preprocess": true, + "training": false, + "get_performance": false, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset061_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-200__unc-softrank_bald__seed-12346/config.json b/nnActive_results/Dataset061_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-200__unc-softrank_bald__seed-12346/config.json new file mode 100644 index 0000000000000000000000000000000000000000..59f4908825a3c91af1b3d33cb39e8275213aa1e9 --- /dev/null +++ b/nnActive_results/Dataset061_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-200__unc-softrank_bald__seed-12346/config.json @@ -0,0 +1,29 @@ +{ + "patch_size": [ + 32, + 74, + 74 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 40, + "trainer": "nnActiveTrainer_200epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "softrank_bald", + "aggregation": "patch", + "query_size": 200, + "query_steps": 5, + "agg_stride": 8, + "n_patch_per_image": 20, + "seed": 12346, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-200", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4 +} \ No newline at end of file diff --git a/nnActive_results/Dataset061_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-200__unc-softrank_bald__seed-12346/state.json b/nnActive_results/Dataset061_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-200__unc-softrank_bald__seed-12346/state.json new file mode 100644 index 0000000000000000000000000000000000000000..b49f820b742cfd4165b8c80db4c5f8a8fbe661e3 --- /dev/null +++ b/nnActive_results/Dataset061_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-200__unc-softrank_bald__seed-12346/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 61, + "name": "AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-200__unc-softrank_bald__seed-12346", + "loop": 0, + "preprocess": true, + "training": false, + "get_performance": false, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset063_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-200__unc-softrank_bald__seed-12348/config.json b/nnActive_results/Dataset063_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-200__unc-softrank_bald__seed-12348/config.json new file mode 100644 index 0000000000000000000000000000000000000000..d73cf2239e05a0538ff0ea68899f081e131e05a1 --- /dev/null +++ b/nnActive_results/Dataset063_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-200__unc-softrank_bald__seed-12348/config.json @@ -0,0 +1,29 @@ +{ + "patch_size": [ + 32, + 74, + 74 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 40, + "trainer": "nnActiveTrainer_200epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "softrank_bald", + "aggregation": "patch", + "query_size": 200, + "query_steps": 5, + "agg_stride": 8, + "n_patch_per_image": 20, + "seed": 12348, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-200", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4 +} \ No newline at end of file diff --git a/nnActive_results/Dataset063_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-200__unc-softrank_bald__seed-12348/state.json b/nnActive_results/Dataset063_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-200__unc-softrank_bald__seed-12348/state.json new file mode 100644 index 0000000000000000000000000000000000000000..d906d6765e435be6e9a4b73a11a57a4f24b62ee2 --- /dev/null +++ b/nnActive_results/Dataset063_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-200__unc-softrank_bald__seed-12348/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 63, + "name": "AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-200__unc-softrank_bald__seed-12348", + "loop": 0, + "preprocess": true, + "training": false, + "get_performance": false, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset072_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-power_pe__seed-12345/config.json b/nnActive_results/Dataset072_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-power_pe__seed-12345/config.json new file mode 100644 index 0000000000000000000000000000000000000000..151969e1dd7a997c400368c6e6dba5b9f2a0f1f8 --- /dev/null +++ b/nnActive_results/Dataset072_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-power_pe__seed-12345/config.json @@ -0,0 +1,29 @@ +{ + "patch_size": [ + 32, + 74, + 74 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 200, + "trainer": "nnActiveTrainer_200epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "power_pe", + "aggregation": "patch", + "query_size": 200, + "query_steps": 5, + "agg_stride": 8, + "n_patch_per_image": 20, + "seed": 12345, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4 +} \ No newline at end of file diff --git a/nnActive_results/Dataset072_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-power_pe__seed-12345/state.json b/nnActive_results/Dataset072_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-power_pe__seed-12345/state.json new file mode 100644 index 0000000000000000000000000000000000000000..cf3daf8811ad7f564d6c456ff82e6ea3fc2bf5d1 --- /dev/null +++ b/nnActive_results/Dataset072_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-power_pe__seed-12345/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 72, + "name": "AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-power_pe__seed-12345", + "loop": 4, + "preprocess": true, + "training": true, + "get_performance": true, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset078_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-pred_entropy__seed-12347/config.json b/nnActive_results/Dataset078_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-pred_entropy__seed-12347/config.json new file mode 100644 index 0000000000000000000000000000000000000000..8227f4c2aa0cd4a173cf6d0b47a47ae238b253fb --- /dev/null +++ b/nnActive_results/Dataset078_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-pred_entropy__seed-12347/config.json @@ -0,0 +1,29 @@ +{ + "patch_size": [ + 32, + 74, + 74 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 200, + "trainer": "nnActiveTrainer_200epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "pred_entropy", + "aggregation": "patch", + "query_size": 200, + "query_steps": 5, + "agg_stride": 8, + "n_patch_per_image": 20, + "seed": 12347, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4 +} \ No newline at end of file diff --git a/nnActive_results/Dataset078_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-pred_entropy__seed-12347/state.json b/nnActive_results/Dataset078_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-pred_entropy__seed-12347/state.json new file mode 100644 index 0000000000000000000000000000000000000000..5a555b7c7e60d4fb7bbc47d6225fa3f4e42a590e --- /dev/null +++ b/nnActive_results/Dataset078_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-pred_entropy__seed-12347/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 78, + "name": "AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-pred_entropy__seed-12347", + "loop": 4, + "preprocess": true, + "training": true, + "get_performance": true, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset079_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-pred_entropy__seed-12348/config.json b/nnActive_results/Dataset079_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-pred_entropy__seed-12348/config.json new file mode 100644 index 0000000000000000000000000000000000000000..37b95249f483afdc15639b7ef4d0a0fe32143f23 --- /dev/null +++ b/nnActive_results/Dataset079_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-pred_entropy__seed-12348/config.json @@ -0,0 +1,29 @@ +{ + "patch_size": [ + 32, + 74, + 74 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 200, + "trainer": "nnActiveTrainer_200epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "pred_entropy", + "aggregation": "patch", + "query_size": 200, + "query_steps": 5, + "agg_stride": 8, + "n_patch_per_image": 20, + "seed": 12348, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4 +} \ No newline at end of file diff --git a/nnActive_results/Dataset079_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-pred_entropy__seed-12348/state.json b/nnActive_results/Dataset079_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-pred_entropy__seed-12348/state.json new file mode 100644 index 0000000000000000000000000000000000000000..e30294b8dc2505bfe860352e1798c087ecd88ac7 --- /dev/null +++ b/nnActive_results/Dataset079_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-pred_entropy__seed-12348/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 79, + "name": "AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-pred_entropy__seed-12348", + "loop": 4, + "preprocess": true, + "training": true, + "get_performance": true, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset098_AMOS2022_task1__patch-1000_1000_1000__qs-15__tr-nnUNetTrainer_200epochs__unc-random__seed-12347/config.json b/nnActive_results/Dataset098_AMOS2022_task1__patch-1000_1000_1000__qs-15__tr-nnUNetTrainer_200epochs__unc-random__seed-12347/config.json new file mode 100644 index 0000000000000000000000000000000000000000..01c7b0b50ce040e1e9a97108817448e93ea67df6 --- /dev/null +++ b/nnActive_results/Dataset098_AMOS2022_task1__patch-1000_1000_1000__qs-15__tr-nnUNetTrainer_200epochs__unc-random__seed-12347/config.json @@ -0,0 +1,29 @@ +{ + "patch_size": [ + 1000, + 1000, + 1000 + ], + "base_id": 216, + "starting_budget": "random", + "starting_budget_size": 15, + "trainer": "nnUNetTrainer_200epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "random", + "aggregation": "patch", + "query_size": 15, + "query_steps": 5, + "agg_stride": 8, + "n_patch_per_image": 15, + "seed": 12347, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__patch-1000_1000_1000__qs-15__tr-nnUNetTrainer_200epochs", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4 +} \ No newline at end of file diff --git a/nnActive_results/Dataset098_AMOS2022_task1__patch-1000_1000_1000__qs-15__tr-nnUNetTrainer_200epochs__unc-random__seed-12347/state.json b/nnActive_results/Dataset098_AMOS2022_task1__patch-1000_1000_1000__qs-15__tr-nnUNetTrainer_200epochs__unc-random__seed-12347/state.json new file mode 100644 index 0000000000000000000000000000000000000000..1f8f718d44ff88c0e380ac6a2d2913c180c6a8d3 --- /dev/null +++ b/nnActive_results/Dataset098_AMOS2022_task1__patch-1000_1000_1000__qs-15__tr-nnUNetTrainer_200epochs__unc-random__seed-12347/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 98, + "name": "AMOS2022_task1__patch-1000_1000_1000__qs-15__tr-nnUNetTrainer_200epochs__unc-random__seed-12347", + "loop": 4, + "preprocess": true, + "training": true, + "get_performance": true, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset118_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-pred_entropy__seed-12347/config.json b/nnActive_results/Dataset118_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-pred_entropy__seed-12347/config.json new file mode 100644 index 0000000000000000000000000000000000000000..1805fce4f1aa8bd526bad8d9005cb6b354396528 --- /dev/null +++ b/nnActive_results/Dataset118_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-pred_entropy__seed-12347/config.json @@ -0,0 +1,29 @@ +{ + "patch_size": [ + 32, + 74, + 74 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 200, + "trainer": "nnActiveTrainer_500epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "pred_entropy", + "aggregation": "patch", + "query_size": 200, + "query_steps": 5, + "agg_stride": 8, + "n_patch_per_image": 20, + "seed": 12347, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4 +} \ No newline at end of file diff --git a/nnActive_results/Dataset118_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-pred_entropy__seed-12347/state.json b/nnActive_results/Dataset118_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-pred_entropy__seed-12347/state.json new file mode 100644 index 0000000000000000000000000000000000000000..92bab636704a771c3e6687d4555e2b3ec40023e8 --- /dev/null +++ b/nnActive_results/Dataset118_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-pred_entropy__seed-12347/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 118, + "name": "AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-pred_entropy__seed-12347", + "loop": 4, + "preprocess": true, + "training": true, + "get_performance": true, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset119_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-pred_entropy__seed-12348/config.json b/nnActive_results/Dataset119_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-pred_entropy__seed-12348/config.json new file mode 100644 index 0000000000000000000000000000000000000000..7976cac0d81faeb46676fe8294538dfa005c8a78 --- /dev/null +++ b/nnActive_results/Dataset119_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-pred_entropy__seed-12348/config.json @@ -0,0 +1,29 @@ +{ + "patch_size": [ + 32, + 74, + 74 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 200, + "trainer": "nnActiveTrainer_500epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "pred_entropy", + "aggregation": "patch", + "query_size": 200, + "query_steps": 5, + "agg_stride": 8, + "n_patch_per_image": 20, + "seed": 12348, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4 +} \ No newline at end of file diff --git a/nnActive_results/Dataset119_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-pred_entropy__seed-12348/state.json b/nnActive_results/Dataset119_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-pred_entropy__seed-12348/state.json new file mode 100644 index 0000000000000000000000000000000000000000..4d2b7dbd3c066d7c37195f0dcbe0193c9e0b6cba --- /dev/null +++ b/nnActive_results/Dataset119_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-pred_entropy__seed-12348/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 119, + "name": "AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-pred_entropy__seed-12348", + "loop": 4, + "preprocess": true, + "training": true, + "get_performance": true, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset134_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-mutual_information__seed-12347/config.json b/nnActive_results/Dataset134_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-mutual_information__seed-12347/config.json new file mode 100644 index 0000000000000000000000000000000000000000..8f32774aabca4a6c4b232025a595f6d219f24c4b --- /dev/null +++ b/nnActive_results/Dataset134_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-mutual_information__seed-12347/config.json @@ -0,0 +1,29 @@ +{ + "patch_size": [ + 32, + 74, + 74 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 500, + "trainer": "nnActiveTrainer_200epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "mutual_information", + "aggregation": "patch", + "query_size": 500, + "query_steps": 5, + "agg_stride": 8, + "n_patch_per_image": 20, + "seed": 12347, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4 +} \ No newline at end of file diff --git a/nnActive_results/Dataset141_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-power_pe__seed-12346/config.json b/nnActive_results/Dataset141_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-power_pe__seed-12346/config.json new file mode 100644 index 0000000000000000000000000000000000000000..f1e6a4c12509498ff4c081f04bb224ecd0ab4f1f --- /dev/null +++ b/nnActive_results/Dataset141_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-power_pe__seed-12346/config.json @@ -0,0 +1,29 @@ +{ + "patch_size": [ + 32, + 74, + 74 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 500, + "trainer": "nnActiveTrainer_200epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "power_pe", + "aggregation": "patch", + "query_size": 500, + "query_steps": 5, + "agg_stride": 8, + "n_patch_per_image": 20, + "seed": 12346, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4 +} \ No newline at end of file diff --git a/nnActive_results/Dataset141_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-power_pe__seed-12346/state.json b/nnActive_results/Dataset141_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-power_pe__seed-12346/state.json new file mode 100644 index 0000000000000000000000000000000000000000..558709dda405f0bb6e0f0d14381153c62dece75f --- /dev/null +++ b/nnActive_results/Dataset141_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-power_pe__seed-12346/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 141, + "name": "AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-power_pe__seed-12346", + "loop": 4, + "preprocess": true, + "training": true, + "get_performance": true, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset218_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-20__unc-power_bald__seed-12347/config.json b/nnActive_results/Dataset218_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-20__unc-power_bald__seed-12347/config.json new file mode 100644 index 0000000000000000000000000000000000000000..3b4b687fc07c1fb8743ecad69a756da874988337 --- /dev/null +++ b/nnActive_results/Dataset218_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-20__unc-power_bald__seed-12347/config.json @@ -0,0 +1,30 @@ +{ + "patch_size": [ + 32, + 74, + 74 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 40, + "trainer": "nnActiveTrainer_200epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "power_bald", + "queries_from_experiment": null, + "aggregation": "patch", + "query_size": 20, + "query_steps": 9, + "agg_stride": 8, + "n_patch_per_image": 20, + "seed": 12347, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-20", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4 +} \ No newline at end of file diff --git a/nnActive_results/Dataset218_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-20__unc-power_bald__seed-12347/state.json b/nnActive_results/Dataset218_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-20__unc-power_bald__seed-12347/state.json new file mode 100644 index 0000000000000000000000000000000000000000..c9c09197e84e79987bf83e66a927ed841c3dab50 --- /dev/null +++ b/nnActive_results/Dataset218_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-20__unc-power_bald__seed-12347/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 218, + "name": "AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-20__unc-power_bald__seed-12347", + "loop": 8, + "preprocess": true, + "training": true, + "get_performance": true, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset234_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-20__unc-random-label__seed-12347/config.json b/nnActive_results/Dataset234_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-20__unc-random-label__seed-12347/config.json new file mode 100644 index 0000000000000000000000000000000000000000..04ccc596d8a4e590ab7620bee400191ddb3658e6 --- /dev/null +++ b/nnActive_results/Dataset234_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-20__unc-random-label__seed-12347/config.json @@ -0,0 +1,30 @@ +{ + "patch_size": [ + 32, + 74, + 74 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 40, + "trainer": "nnActiveTrainer_200epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "random-label", + "queries_from_experiment": null, + "aggregation": "patch", + "query_size": 20, + "query_steps": 9, + "agg_stride": 8, + "n_patch_per_image": 20, + "seed": 12347, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-20", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4 +} \ No newline at end of file diff --git a/nnActive_results/Dataset234_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-20__unc-random-label__seed-12347/state.json b/nnActive_results/Dataset234_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-20__unc-random-label__seed-12347/state.json new file mode 100644 index 0000000000000000000000000000000000000000..4f37c36f877189152a0c89068f0bfc2b32109c22 --- /dev/null +++ b/nnActive_results/Dataset234_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-20__unc-random-label__seed-12347/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 234, + "name": "AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-20__unc-random-label__seed-12347", + "loop": 8, + "preprocess": true, + "training": true, + "get_performance": true, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset240_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-20__unc-softrank_bald__seed-12345/config.json b/nnActive_results/Dataset240_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-20__unc-softrank_bald__seed-12345/config.json new file mode 100644 index 0000000000000000000000000000000000000000..c026221abca9778cd9897885aaccea661b7584c8 --- /dev/null +++ b/nnActive_results/Dataset240_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-20__unc-softrank_bald__seed-12345/config.json @@ -0,0 +1,30 @@ +{ + "patch_size": [ + 32, + 74, + 74 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 40, + "trainer": "nnActiveTrainer_200epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "softrank_bald", + "queries_from_experiment": null, + "aggregation": "patch", + "query_size": 20, + "query_steps": 9, + "agg_stride": 8, + "n_patch_per_image": 20, + "seed": 12345, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-20", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4 +} \ No newline at end of file diff --git a/nnActive_results/Dataset240_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-20__unc-softrank_bald__seed-12345/state.json b/nnActive_results/Dataset240_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-20__unc-softrank_bald__seed-12345/state.json new file mode 100644 index 0000000000000000000000000000000000000000..4ea72fa636b62df1039316699f482ee781920d56 --- /dev/null +++ b/nnActive_results/Dataset240_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-20__unc-softrank_bald__seed-12345/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 240, + "name": "AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-20__unc-softrank_bald__seed-12345", + "loop": 8, + "preprocess": true, + "training": true, + "get_performance": true, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset249_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-250__unc-power_bald__seed-12346/config.json b/nnActive_results/Dataset249_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-250__unc-power_bald__seed-12346/config.json new file mode 100644 index 0000000000000000000000000000000000000000..a17fbb49b49afe63a725cd30f57efa3c73e9d3ee --- /dev/null +++ b/nnActive_results/Dataset249_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-250__unc-power_bald__seed-12346/config.json @@ -0,0 +1,30 @@ +{ + "patch_size": [ + 32, + 74, + 74 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 500, + "trainer": "nnActiveTrainer_200epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "power_bald", + "queries_from_experiment": null, + "aggregation": "patch", + "query_size": 250, + "query_steps": 9, + "agg_stride": 8, + "n_patch_per_image": 250, + "seed": 12346, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-250", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4 +} \ No newline at end of file diff --git a/nnActive_results/Dataset249_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-250__unc-power_bald__seed-12346/state.json b/nnActive_results/Dataset249_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-250__unc-power_bald__seed-12346/state.json new file mode 100644 index 0000000000000000000000000000000000000000..ceca50cd46b5d7cca37dff6209de5a2c021a89b1 --- /dev/null +++ b/nnActive_results/Dataset249_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-250__unc-power_bald__seed-12346/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 249, + "name": "AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-250__unc-power_bald__seed-12346", + "loop": 8, + "preprocess": true, + "training": true, + "get_performance": true, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset253_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-250__unc-power_pe__seed-12346/config.json b/nnActive_results/Dataset253_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-250__unc-power_pe__seed-12346/config.json new file mode 100644 index 0000000000000000000000000000000000000000..860cf0195c6dee714db6e85631533b45a247d2ec --- /dev/null +++ b/nnActive_results/Dataset253_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-250__unc-power_pe__seed-12346/config.json @@ -0,0 +1,30 @@ +{ + "patch_size": [ + 32, + 74, + 74 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 500, + "trainer": "nnActiveTrainer_200epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "power_pe", + "queries_from_experiment": null, + "aggregation": "patch", + "query_size": 250, + "query_steps": 9, + "agg_stride": 8, + "n_patch_per_image": 250, + "seed": 12346, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-250", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4 +} \ No newline at end of file diff --git a/nnActive_results/Dataset253_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-250__unc-power_pe__seed-12346/state.json b/nnActive_results/Dataset253_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-250__unc-power_pe__seed-12346/state.json new file mode 100644 index 0000000000000000000000000000000000000000..624b4ab0c530fd3375a4fd575bf21c0492477d0c --- /dev/null +++ b/nnActive_results/Dataset253_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-250__unc-power_pe__seed-12346/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 253, + "name": "AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-250__unc-power_pe__seed-12346", + "loop": 8, + "preprocess": true, + "training": true, + "get_performance": true, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset260_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-250__unc-random-label2__seed-12345/config.json b/nnActive_results/Dataset260_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-250__unc-random-label2__seed-12345/config.json new file mode 100644 index 0000000000000000000000000000000000000000..6b6239020ab581718eb9e842d5dafe8df1f03a9a --- /dev/null +++ b/nnActive_results/Dataset260_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-250__unc-random-label2__seed-12345/config.json @@ -0,0 +1,30 @@ +{ + "patch_size": [ + 32, + 74, + 74 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 500, + "trainer": "nnActiveTrainer_200epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "random-label2", + "queries_from_experiment": null, + "aggregation": "patch", + "query_size": 250, + "query_steps": 9, + "agg_stride": 8, + "n_patch_per_image": 250, + "seed": 12345, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-250", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4 +} \ No newline at end of file diff --git a/nnActive_results/Dataset260_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-250__unc-random-label2__seed-12345/state.json b/nnActive_results/Dataset260_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-250__unc-random-label2__seed-12345/state.json new file mode 100644 index 0000000000000000000000000000000000000000..c503a68030f16db47acb31c959cc13bf6ea13d37 --- /dev/null +++ b/nnActive_results/Dataset260_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-250__unc-random-label2__seed-12345/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 260, + "name": "AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-250__unc-random-label2__seed-12345", + "loop": 8, + "preprocess": true, + "training": true, + "get_performance": true, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset286_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-power_pe__seed-12347/config.json b/nnActive_results/Dataset286_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-power_pe__seed-12347/config.json new file mode 100644 index 0000000000000000000000000000000000000000..e1270fef24ba1913526a1be131023a75aafd1f9f --- /dev/null +++ b/nnActive_results/Dataset286_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-power_pe__seed-12347/config.json @@ -0,0 +1,30 @@ +{ + "patch_size": [ + 32, + 74, + 74 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 500, + "trainer": "nnActiveTrainer_500epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "power_pe", + "queries_from_experiment": null, + "aggregation": "patch", + "query_size": 500, + "query_steps": 5, + "agg_stride": 8, + "n_patch_per_image": 20, + "seed": 12347, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4 +} \ No newline at end of file diff --git a/nnActive_results/Dataset286_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-power_pe__seed-12347/state.json b/nnActive_results/Dataset286_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-power_pe__seed-12347/state.json new file mode 100644 index 0000000000000000000000000000000000000000..efa98dc00db2d0cffb4fbe7159bfb237da5190e8 --- /dev/null +++ b/nnActive_results/Dataset286_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-power_pe__seed-12347/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 286, + "name": "AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-power_pe__seed-12347", + "loop": 4, + "preprocess": true, + "training": true, + "get_performance": true, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset318_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__precomputed-queries__unc-pred_entropy__seed-12347/config.json b/nnActive_results/Dataset318_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__precomputed-queries__unc-pred_entropy__seed-12347/config.json new file mode 100644 index 0000000000000000000000000000000000000000..d0904b687ee3175f544b4ea9b6ef971ecfeac89d --- /dev/null +++ b/nnActive_results/Dataset318_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__precomputed-queries__unc-pred_entropy__seed-12347/config.json @@ -0,0 +1,30 @@ +{ + "patch_size": [ + 32, + 74, + 74 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 500, + "trainer": "nnActiveTrainer_500epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "pred_entropy", + "queries_from_experiment": "AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-pred_entropy__seed-12347", + "aggregation": "patch", + "query_size": 500, + "query_steps": 5, + "agg_stride": 8, + "n_patch_per_image": 500, + "seed": 12347, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__precomputed-queries", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4 +} \ No newline at end of file diff --git a/nnActive_results/Dataset318_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__precomputed-queries__unc-pred_entropy__seed-12347/state.json b/nnActive_results/Dataset318_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__precomputed-queries__unc-pred_entropy__seed-12347/state.json new file mode 100644 index 0000000000000000000000000000000000000000..cfa3f8d0b30e9704ba3cbcf932f9f2e147e2da39 --- /dev/null +++ b/nnActive_results/Dataset318_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__precomputed-queries__unc-pred_entropy__seed-12347/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 318, + "name": "AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__precomputed-queries__unc-pred_entropy__seed-12347", + "loop": 4, + "preprocess": true, + "training": true, + "get_performance": true, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset323_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__precomputed-queries__unc-random-label2__seed-12348/config.json b/nnActive_results/Dataset323_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__precomputed-queries__unc-random-label2__seed-12348/config.json new file mode 100644 index 0000000000000000000000000000000000000000..27492d2819eaa06422597cc3d554dba6a1c8e1a2 --- /dev/null +++ b/nnActive_results/Dataset323_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__precomputed-queries__unc-random-label2__seed-12348/config.json @@ -0,0 +1,30 @@ +{ + "patch_size": [ + 32, + 74, + 74 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 500, + "trainer": "nnActiveTrainer_500epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "random-label2", + "queries_from_experiment": "AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-random-label2__seed-12348", + "aggregation": "patch", + "query_size": 500, + "query_steps": 5, + "agg_stride": 8, + "n_patch_per_image": 500, + "seed": 12348, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__precomputed-queries", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4 +} \ No newline at end of file diff --git a/nnActive_results/Dataset323_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__precomputed-queries__unc-random-label2__seed-12348/state.json b/nnActive_results/Dataset323_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__precomputed-queries__unc-random-label2__seed-12348/state.json new file mode 100644 index 0000000000000000000000000000000000000000..d39c4e5d8c5a20d9f6f797aeebffee948d6088d1 --- /dev/null +++ b/nnActive_results/Dataset323_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__precomputed-queries__unc-random-label2__seed-12348/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 323, + "name": "AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__precomputed-queries__unc-random-label2__seed-12348", + "loop": 4, + "preprocess": true, + "training": true, + "get_performance": true, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset364_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-1000__unc-softrank_bald__seed-12345/config.json b/nnActive_results/Dataset364_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-1000__unc-softrank_bald__seed-12345/config.json new file mode 100644 index 0000000000000000000000000000000000000000..087e52c89f68bc3ebc9fdd30ff41c6109b92b54e --- /dev/null +++ b/nnActive_results/Dataset364_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-1000__unc-softrank_bald__seed-12345/config.json @@ -0,0 +1,30 @@ +{ + "patch_size": [ + 32, + 74, + 74 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 500, + "trainer": "nnActiveTrainer_200epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "softrank_bald", + "queries_from_experiment": null, + "aggregation": "patch", + "query_size": 1000, + "query_steps": 3, + "agg_stride": 8, + "n_patch_per_image": 1000, + "seed": 12345, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-1000", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4 +} \ No newline at end of file diff --git a/nnActive_results/Dataset364_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-1000__unc-softrank_bald__seed-12345/state.json b/nnActive_results/Dataset364_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-1000__unc-softrank_bald__seed-12345/state.json new file mode 100644 index 0000000000000000000000000000000000000000..7d9226e9b276c2e9af4667414f2f11f08ef2ecf8 --- /dev/null +++ b/nnActive_results/Dataset364_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-1000__unc-softrank_bald__seed-12345/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 364, + "name": "AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-1000__unc-softrank_bald__seed-12345", + "loop": 2, + "preprocess": true, + "training": true, + "get_performance": true, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset437_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-40__qs-40__unc-power_bald__seed-12346/config.json b/nnActive_results/Dataset437_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-40__qs-40__unc-power_bald__seed-12346/config.json new file mode 100644 index 0000000000000000000000000000000000000000..3dbae7b566e7136702a06423dfaafafdb46f9817 --- /dev/null +++ b/nnActive_results/Dataset437_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-40__qs-40__unc-power_bald__seed-12346/config.json @@ -0,0 +1,30 @@ +{ + "patch_size": [ + 16, + 32, + 32 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 40, + "trainer": "nnActiveTrainer_200epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "power_bald", + "queries_from_experiment": null, + "aggregation": "patch", + "query_size": 40, + "query_steps": 5, + "agg_stride": 8, + "n_patch_per_image": 40, + "seed": 12346, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__patch-16_32_32__sb-random-label2-all-classes__sbs-40__qs-40", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4 +} \ No newline at end of file diff --git a/nnActive_results/Dataset437_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-40__qs-40__unc-power_bald__seed-12346/state.json b/nnActive_results/Dataset437_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-40__qs-40__unc-power_bald__seed-12346/state.json new file mode 100644 index 0000000000000000000000000000000000000000..546c112c665c7e2bc55d6174570294b21ef7ead7 --- /dev/null +++ b/nnActive_results/Dataset437_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-40__qs-40__unc-power_bald__seed-12346/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 437, + "name": "AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-40__qs-40__unc-power_bald__seed-12346", + "loop": 4, + "preprocess": true, + "training": true, + "get_performance": true, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset442_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-40__qs-40__unc-power_pe__seed-12347/config.json b/nnActive_results/Dataset442_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-40__qs-40__unc-power_pe__seed-12347/config.json new file mode 100644 index 0000000000000000000000000000000000000000..698beb82ccbf1235379b508fb7be262cc198fef3 --- /dev/null +++ b/nnActive_results/Dataset442_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-40__qs-40__unc-power_pe__seed-12347/config.json @@ -0,0 +1,30 @@ +{ + "patch_size": [ + 16, + 32, + 32 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 40, + "trainer": "nnActiveTrainer_200epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "power_pe", + "queries_from_experiment": null, + "aggregation": "patch", + "query_size": 40, + "query_steps": 5, + "agg_stride": 8, + "n_patch_per_image": 40, + "seed": 12347, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__patch-16_32_32__sb-random-label2-all-classes__sbs-40__qs-40", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4 +} \ No newline at end of file diff --git a/nnActive_results/Dataset442_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-40__qs-40__unc-power_pe__seed-12347/state.json b/nnActive_results/Dataset442_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-40__qs-40__unc-power_pe__seed-12347/state.json new file mode 100644 index 0000000000000000000000000000000000000000..ad5b3c1d2acb127fb3dd17fbc64cd64e6e6d58b6 --- /dev/null +++ b/nnActive_results/Dataset442_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-40__qs-40__unc-power_pe__seed-12347/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 442, + "name": "AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-40__qs-40__unc-power_pe__seed-12347", + "loop": 4, + "preprocess": true, + "training": true, + "get_performance": true, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset451_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-40__qs-40__unc-random-label2__seed-12348/config.json b/nnActive_results/Dataset451_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-40__qs-40__unc-random-label2__seed-12348/config.json new file mode 100644 index 0000000000000000000000000000000000000000..cad53132e9227a2fd73f986ad7d5bacb4a7f8027 --- /dev/null +++ b/nnActive_results/Dataset451_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-40__qs-40__unc-random-label2__seed-12348/config.json @@ -0,0 +1,30 @@ +{ + "patch_size": [ + 16, + 32, + 32 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 40, + "trainer": "nnActiveTrainer_200epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "random-label2", + "queries_from_experiment": null, + "aggregation": "patch", + "query_size": 40, + "query_steps": 5, + "agg_stride": 8, + "n_patch_per_image": 40, + "seed": 12348, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__patch-16_32_32__sb-random-label2-all-classes__sbs-40__qs-40", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4 +} \ No newline at end of file diff --git a/nnActive_results/Dataset451_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-40__qs-40__unc-random-label2__seed-12348/state.json b/nnActive_results/Dataset451_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-40__qs-40__unc-random-label2__seed-12348/state.json new file mode 100644 index 0000000000000000000000000000000000000000..6b6c62533a7b0634745d189dcdbecada49aaffbb --- /dev/null +++ b/nnActive_results/Dataset451_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-40__qs-40__unc-random-label2__seed-12348/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 451, + "name": "AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-40__qs-40__unc-random-label2__seed-12348", + "loop": 4, + "preprocess": true, + "training": true, + "get_performance": true, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset456_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-40__qs-40__unc-random__seed-12345/config.json b/nnActive_results/Dataset456_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-40__qs-40__unc-random__seed-12345/config.json new file mode 100644 index 0000000000000000000000000000000000000000..7476561fc6b00e50ac0067ecb5871282764779ee --- /dev/null +++ b/nnActive_results/Dataset456_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-40__qs-40__unc-random__seed-12345/config.json @@ -0,0 +1,30 @@ +{ + "patch_size": [ + 16, + 32, + 32 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 40, + "trainer": "nnActiveTrainer_200epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "random", + "queries_from_experiment": null, + "aggregation": "patch", + "query_size": 40, + "query_steps": 5, + "agg_stride": 8, + "n_patch_per_image": 40, + "seed": 12345, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__patch-16_32_32__sb-random-label2-all-classes__sbs-40__qs-40", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4 +} \ No newline at end of file diff --git a/nnActive_results/Dataset456_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-40__qs-40__unc-random__seed-12345/state.json b/nnActive_results/Dataset456_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-40__qs-40__unc-random__seed-12345/state.json new file mode 100644 index 0000000000000000000000000000000000000000..57f955d613553e514faea6beef60260b2dd9fd60 --- /dev/null +++ b/nnActive_results/Dataset456_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-40__qs-40__unc-random__seed-12345/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 456, + "name": "AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-40__qs-40__unc-random__seed-12345", + "loop": 4, + "preprocess": true, + "training": true, + "get_performance": true, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset504_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-500__qs-500__unc-power_pe__seed-12345/config.json b/nnActive_results/Dataset504_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-500__qs-500__unc-power_pe__seed-12345/config.json new file mode 100644 index 0000000000000000000000000000000000000000..a4db79bd759be46e8a0d54ef245ad2f4e76478b7 --- /dev/null +++ b/nnActive_results/Dataset504_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-500__qs-500__unc-power_pe__seed-12345/config.json @@ -0,0 +1,30 @@ +{ + "patch_size": [ + 16, + 32, + 32 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 500, + "trainer": "nnActiveTrainer_200epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "power_pe", + "queries_from_experiment": null, + "aggregation": "patch", + "query_size": 500, + "query_steps": 5, + "agg_stride": 8, + "n_patch_per_image": 500, + "seed": 12345, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__patch-16_32_32__sb-random-label2-all-classes__sbs-500__qs-500", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4 +} \ No newline at end of file diff --git a/nnActive_results/Dataset504_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-500__qs-500__unc-power_pe__seed-12345/state.json b/nnActive_results/Dataset504_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-500__qs-500__unc-power_pe__seed-12345/state.json new file mode 100644 index 0000000000000000000000000000000000000000..e79741151285dd56dd64aa31a964d074fc51307d --- /dev/null +++ b/nnActive_results/Dataset504_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-500__qs-500__unc-power_pe__seed-12345/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 504, + "name": "AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-500__qs-500__unc-power_pe__seed-12345", + "loop": 4, + "preprocess": true, + "training": true, + "get_performance": true, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset505_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-500__qs-500__unc-power_pe__seed-12346/config.json b/nnActive_results/Dataset505_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-500__qs-500__unc-power_pe__seed-12346/config.json new file mode 100644 index 0000000000000000000000000000000000000000..b7322f2d16b08441c62e283f4fe085d0f8e4f0d8 --- /dev/null +++ b/nnActive_results/Dataset505_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-500__qs-500__unc-power_pe__seed-12346/config.json @@ -0,0 +1,30 @@ +{ + "patch_size": [ + 16, + 32, + 32 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 500, + "trainer": "nnActiveTrainer_200epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "power_pe", + "queries_from_experiment": null, + "aggregation": "patch", + "query_size": 500, + "query_steps": 5, + "agg_stride": 8, + "n_patch_per_image": 500, + "seed": 12346, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__patch-16_32_32__sb-random-label2-all-classes__sbs-500__qs-500", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4 +} \ No newline at end of file diff --git a/nnActive_results/Dataset505_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-500__qs-500__unc-power_pe__seed-12346/state.json b/nnActive_results/Dataset505_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-500__qs-500__unc-power_pe__seed-12346/state.json new file mode 100644 index 0000000000000000000000000000000000000000..638f0da87b156823e9879ffcf58eff2327904fd0 --- /dev/null +++ b/nnActive_results/Dataset505_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-500__qs-500__unc-power_pe__seed-12346/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 505, + "name": "AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-500__qs-500__unc-power_pe__seed-12346", + "loop": 4, + "preprocess": true, + "training": true, + "get_performance": true, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset535_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-class_pe33__seed-12347/config.json b/nnActive_results/Dataset535_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-class_pe33__seed-12347/config.json new file mode 100644 index 0000000000000000000000000000000000000000..08f6c89b725a680831d5351aa8f4026a3c05ae95 --- /dev/null +++ b/nnActive_results/Dataset535_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-class_pe33__seed-12347/config.json @@ -0,0 +1,30 @@ +{ + "patch_size": [ + 32, + 74, + 74 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 200, + "trainer": "nnActiveTrainer_200epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "class_pe33", + "queries_from_experiment": null, + "aggregation": "patch", + "query_size": 200, + "query_steps": 5, + "agg_stride": 8, + "n_patch_per_image": 20, + "seed": 12347, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4 +} \ No newline at end of file diff --git a/nnActive_results/Dataset535_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-class_pe33__seed-12347/state.json b/nnActive_results/Dataset535_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-class_pe33__seed-12347/state.json new file mode 100644 index 0000000000000000000000000000000000000000..4dd853422e4565875b5ae6778d746424084b124c --- /dev/null +++ b/nnActive_results/Dataset535_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-class_pe33__seed-12347/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 535, + "name": "AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-class_pe33__seed-12347", + "loop": 4, + "preprocess": true, + "training": true, + "get_performance": true, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset541_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-40__unc-class_pe33__seed-12347/config.json b/nnActive_results/Dataset541_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-40__unc-class_pe33__seed-12347/config.json new file mode 100644 index 0000000000000000000000000000000000000000..8dd9522f72f005fb15953a77e60acb8c8a8b59c6 --- /dev/null +++ b/nnActive_results/Dataset541_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-40__unc-class_pe33__seed-12347/config.json @@ -0,0 +1,30 @@ +{ + "patch_size": [ + 32, + 74, + 74 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 40, + "trainer": "nnActiveTrainer_200epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "class_pe33", + "queries_from_experiment": null, + "aggregation": "patch", + "query_size": 40, + "query_steps": 5, + "agg_stride": 8, + "n_patch_per_image": 20, + "seed": 12347, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-40", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4 +} \ No newline at end of file diff --git a/nnActive_results/Dataset541_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-40__unc-class_pe33__seed-12347/state.json b/nnActive_results/Dataset541_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-40__unc-class_pe33__seed-12347/state.json new file mode 100644 index 0000000000000000000000000000000000000000..657898a1a3ea6249c76d9ab305033028179fa2be --- /dev/null +++ b/nnActive_results/Dataset541_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-40__unc-class_pe33__seed-12347/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 541, + "name": "AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-40__unc-class_pe33__seed-12347", + "loop": 4, + "preprocess": true, + "training": true, + "get_performance": true, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset565_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-class_pe66__seed-12346/config.json b/nnActive_results/Dataset565_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-class_pe66__seed-12346/config.json new file mode 100644 index 0000000000000000000000000000000000000000..60c0e8412301e15370f92c11d08b585a60b3a119 --- /dev/null +++ b/nnActive_results/Dataset565_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-class_pe66__seed-12346/config.json @@ -0,0 +1,30 @@ +{ + "patch_size": [ + 32, + 74, + 74 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 500, + "trainer": "nnActiveTrainer_500epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "class_pe66", + "queries_from_experiment": null, + "aggregation": "patch", + "query_size": 500, + "query_steps": 5, + "agg_stride": 8, + "n_patch_per_image": 20, + "seed": 12346, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4 +} \ No newline at end of file diff --git a/nnActive_results/Dataset565_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-class_pe66__seed-12346/state.json b/nnActive_results/Dataset565_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-class_pe66__seed-12346/state.json new file mode 100644 index 0000000000000000000000000000000000000000..2d53c2233c724cb6f4b09c74ffbdb5d703135119 --- /dev/null +++ b/nnActive_results/Dataset565_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-class_pe66__seed-12346/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 565, + "name": "AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-class_pe66__seed-12346", + "loop": 4, + "preprocess": true, + "training": true, + "get_performance": true, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset583_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-class_power_pe66_exp__seed-12345/config.json b/nnActive_results/Dataset583_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-class_power_pe66_exp__seed-12345/config.json new file mode 100644 index 0000000000000000000000000000000000000000..c713237979c8cca85c0a193fac72df3aaa72e3ad --- /dev/null +++ b/nnActive_results/Dataset583_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-class_power_pe66_exp__seed-12345/config.json @@ -0,0 +1,30 @@ +{ + "patch_size": [ + 32, + 74, + 74 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 500, + "trainer": "nnActiveTrainer_200epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "class_power_pe66_exp", + "queries_from_experiment": null, + "aggregation": "patch", + "query_size": 500, + "query_steps": 5, + "agg_stride": 8, + "n_patch_per_image": 20, + "seed": 12345, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4 +} \ No newline at end of file diff --git a/nnActive_results/Dataset583_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-class_power_pe66_exp__seed-12345/state.json b/nnActive_results/Dataset583_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-class_power_pe66_exp__seed-12345/state.json new file mode 100644 index 0000000000000000000000000000000000000000..151141462346c46450604aa244c67ef3c034af1c --- /dev/null +++ b/nnActive_results/Dataset583_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-class_power_pe66_exp__seed-12345/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 583, + "name": "AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-class_power_pe66_exp__seed-12345", + "loop": 4, + "preprocess": true, + "training": true, + "get_performance": true, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset596_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-40__unc-random-label2__seed-12347/config.json b/nnActive_results/Dataset596_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-40__unc-random-label2__seed-12347/config.json new file mode 100644 index 0000000000000000000000000000000000000000..10532c4b3d2f35364206afbfcb0ea3874005f991 --- /dev/null +++ b/nnActive_results/Dataset596_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-40__unc-random-label2__seed-12347/config.json @@ -0,0 +1,30 @@ +{ + "patch_size": [ + 32, + 74, + 74 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 40, + "trainer": "nnActiveTrainer_500epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "random-label2", + "queries_from_experiment": null, + "aggregation": "patch", + "query_size": 40, + "query_steps": 5, + "agg_stride": 8, + "n_patch_per_image": 20, + "seed": 12347, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-40", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4 +} \ No newline at end of file diff --git a/nnActive_results/Dataset596_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-40__unc-random-label2__seed-12347/state.json b/nnActive_results/Dataset596_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-40__unc-random-label2__seed-12347/state.json new file mode 100644 index 0000000000000000000000000000000000000000..7cc3886b4050af90085b3a1743285f67c8ef11be --- /dev/null +++ b/nnActive_results/Dataset596_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-40__unc-random-label2__seed-12347/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 596, + "name": "AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-40__unc-random-label2__seed-12347", + "loop": 4, + "preprocess": true, + "training": true, + "get_performance": true, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset597_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-40__unc-random-label2__seed-12348/config.json b/nnActive_results/Dataset597_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-40__unc-random-label2__seed-12348/config.json new file mode 100644 index 0000000000000000000000000000000000000000..cb21e374493e6453091b0898f834c910cfdfe8b3 --- /dev/null +++ b/nnActive_results/Dataset597_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-40__unc-random-label2__seed-12348/config.json @@ -0,0 +1,30 @@ +{ + "patch_size": [ + 32, + 74, + 74 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 40, + "trainer": "nnActiveTrainer_500epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "random-label2", + "queries_from_experiment": null, + "aggregation": "patch", + "query_size": 40, + "query_steps": 5, + "agg_stride": 8, + "n_patch_per_image": 20, + "seed": 12348, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-40", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4 +} \ No newline at end of file diff --git a/nnActive_results/Dataset597_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-40__unc-random-label2__seed-12348/state.json b/nnActive_results/Dataset597_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-40__unc-random-label2__seed-12348/state.json new file mode 100644 index 0000000000000000000000000000000000000000..b3da20f8c50c8ac49a4ac5c9ab3eecc4e61fbe9a --- /dev/null +++ b/nnActive_results/Dataset597_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-40__unc-random-label2__seed-12348/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 597, + "name": "AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-40__unc-random-label2__seed-12348", + "loop": 4, + "preprocess": true, + "training": true, + "get_performance": true, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset613_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-class_power_pe66_exp__seed-12346/config.json b/nnActive_results/Dataset613_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-class_power_pe66_exp__seed-12346/config.json new file mode 100644 index 0000000000000000000000000000000000000000..24a8e02293227f1cfc81f86f0fb263c717696ce3 --- /dev/null +++ b/nnActive_results/Dataset613_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-class_power_pe66_exp__seed-12346/config.json @@ -0,0 +1,30 @@ +{ + "patch_size": [ + 32, + 74, + 74 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 500, + "trainer": "nnActiveTrainer_500epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "class_power_pe66_exp", + "queries_from_experiment": null, + "aggregation": "patch", + "query_size": 500, + "query_steps": 5, + "agg_stride": 8, + "n_patch_per_image": 20, + "seed": 12346, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4 +} \ No newline at end of file diff --git a/nnActive_results/Dataset613_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-class_power_pe66_exp__seed-12346/state.json b/nnActive_results/Dataset613_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-class_power_pe66_exp__seed-12346/state.json new file mode 100644 index 0000000000000000000000000000000000000000..cc3f3fe558c292a0ccd5465c7c335662f479ea4e --- /dev/null +++ b/nnActive_results/Dataset613_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-class_power_pe66_exp__seed-12346/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 613, + "name": "AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-class_power_pe66_exp__seed-12346", + "loop": 4, + "preprocess": true, + "training": true, + "get_performance": true, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset634_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-500__qs-500__unc-class_power_pe66_exp__seed-12347/config.json b/nnActive_results/Dataset634_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-500__qs-500__unc-class_power_pe66_exp__seed-12347/config.json new file mode 100644 index 0000000000000000000000000000000000000000..f9c85a385d02d888765114e4654a18116451fa29 --- /dev/null +++ b/nnActive_results/Dataset634_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-500__qs-500__unc-class_power_pe66_exp__seed-12347/config.json @@ -0,0 +1,30 @@ +{ + "patch_size": [ + 16, + 32, + 32 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 500, + "trainer": "nnActiveTrainer_200epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "class_power_pe66_exp", + "queries_from_experiment": null, + "aggregation": "patch", + "query_size": 500, + "query_steps": 5, + "agg_stride": 8, + "n_patch_per_image": 500, + "seed": 12347, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__patch-16_32_32__sb-random-label2-all-classes__sbs-500__qs-500", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4 +} \ No newline at end of file diff --git a/nnActive_results/Dataset634_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-500__qs-500__unc-class_power_pe66_exp__seed-12347/state.json b/nnActive_results/Dataset634_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-500__qs-500__unc-class_power_pe66_exp__seed-12347/state.json new file mode 100644 index 0000000000000000000000000000000000000000..bdc574bddf9a977da193588cf5b133b04db36722 --- /dev/null +++ b/nnActive_results/Dataset634_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-500__qs-500__unc-class_power_pe66_exp__seed-12347/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 634, + "name": "AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-500__qs-500__unc-class_power_pe66_exp__seed-12347", + "loop": 4, + "preprocess": true, + "training": true, + "get_performance": true, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file