diff --git a/nnActive_results/Dataset001_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-40__unc-mutual_information__seed-12346/config.json b/nnActive_results/Dataset001_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-40__unc-mutual_information__seed-12346/config.json new file mode 100644 index 0000000000000000000000000000000000000000..16e097b338f8fac92296f00498650ebfcd5a5ec0 --- /dev/null +++ b/nnActive_results/Dataset001_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-40__unc-mutual_information__seed-12346/config.json @@ -0,0 +1,29 @@ +{ + "patch_size": [ + 32, + 74, + 74 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 40, + "trainer": "nnActiveTrainer_200epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "mutual_information", + "aggregation": "patch", + "query_size": 40, + "query_steps": 5, + "agg_stride": 8, + "n_patch_per_image": 20, + "seed": 12346, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-40", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4 +} \ No newline at end of file diff --git a/nnActive_results/Dataset001_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-40__unc-mutual_information__seed-12346/state.json b/nnActive_results/Dataset001_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-40__unc-mutual_information__seed-12346/state.json new file mode 100644 index 0000000000000000000000000000000000000000..dbcdcf83d4b8446b849cda9b1135e5d55447dfa1 --- /dev/null +++ b/nnActive_results/Dataset001_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-40__unc-mutual_information__seed-12346/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 1, + "name": "AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-40__unc-mutual_information__seed-12346", + "loop": 4, + "preprocess": true, + "training": true, + "get_performance": true, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset038_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-200__unc-power_bald__seed-12347/config.json b/nnActive_results/Dataset038_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-200__unc-power_bald__seed-12347/config.json new file mode 100644 index 0000000000000000000000000000000000000000..a890e392a64f5cab14ad2e349ddc7173bb4b0414 --- /dev/null +++ b/nnActive_results/Dataset038_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-200__unc-power_bald__seed-12347/config.json @@ -0,0 +1,29 @@ +{ + "patch_size": [ + 32, + 74, + 74 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 40, + "trainer": "nnActiveTrainer_200epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "power_bald", + "aggregation": "patch", + "query_size": 200, + "query_steps": 5, + "agg_stride": 8, + "n_patch_per_image": 20, + "seed": 12347, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-200", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4 +} \ No newline at end of file diff --git a/nnActive_results/Dataset038_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-200__unc-power_bald__seed-12347/state.json b/nnActive_results/Dataset038_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-200__unc-power_bald__seed-12347/state.json new file mode 100644 index 0000000000000000000000000000000000000000..e7beff14c7a55393ae5b32aa5c44a171562ab8bc --- /dev/null +++ b/nnActive_results/Dataset038_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-200__unc-power_bald__seed-12347/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 38, + "name": "AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-200__unc-power_bald__seed-12347", + "loop": 0, + "preprocess": true, + "training": false, + "get_performance": false, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset049_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-200__unc-random-label2__seed-12346/config.json b/nnActive_results/Dataset049_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-200__unc-random-label2__seed-12346/config.json new file mode 100644 index 0000000000000000000000000000000000000000..a4de3abfae72d8b2d2a51e29ce7ab298c7cdb2ae --- /dev/null +++ b/nnActive_results/Dataset049_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-200__unc-random-label2__seed-12346/config.json @@ -0,0 +1,29 @@ +{ + "patch_size": [ + 32, + 74, + 74 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 40, + "trainer": "nnActiveTrainer_200epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "random-label2", + "aggregation": "patch", + "query_size": 200, + "query_steps": 5, + "agg_stride": 8, + "n_patch_per_image": 20, + "seed": 12346, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-200", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4 +} \ No newline at end of file diff --git a/nnActive_results/Dataset049_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-200__unc-random-label2__seed-12346/state.json b/nnActive_results/Dataset049_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-200__unc-random-label2__seed-12346/state.json new file mode 100644 index 0000000000000000000000000000000000000000..81a7d7ffe6000769ab2d2f710682f9a728540edd --- /dev/null +++ b/nnActive_results/Dataset049_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-200__unc-random-label2__seed-12346/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 49, + "name": "AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-200__unc-random-label2__seed-12346", + "loop": 0, + "preprocess": true, + "training": false, + "get_performance": false, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset065_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-mutual_information__seed-12346/config.json b/nnActive_results/Dataset065_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-mutual_information__seed-12346/config.json new file mode 100644 index 0000000000000000000000000000000000000000..8eb10ca7b29ec462dd3720d3fa8f2acdff2d0d33 --- /dev/null +++ b/nnActive_results/Dataset065_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-mutual_information__seed-12346/config.json @@ -0,0 +1,29 @@ +{ + "patch_size": [ + 32, + 74, + 74 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 200, + "trainer": "nnActiveTrainer_200epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "mutual_information", + "aggregation": "patch", + "query_size": 200, + "query_steps": 5, + "agg_stride": 8, + "n_patch_per_image": 20, + "seed": 12346, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4 +} \ No newline at end of file diff --git a/nnActive_results/Dataset065_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-mutual_information__seed-12346/state.json b/nnActive_results/Dataset065_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-mutual_information__seed-12346/state.json new file mode 100644 index 0000000000000000000000000000000000000000..d26420a4002637bcd1eeb60b7a9cefe05ac7d2fc --- /dev/null +++ b/nnActive_results/Dataset065_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-mutual_information__seed-12346/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 65, + "name": "AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-mutual_information__seed-12346", + "loop": 4, + "preprocess": true, + "training": true, + "get_performance": true, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset083_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-random-label2__seed-12348/config.json b/nnActive_results/Dataset083_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-random-label2__seed-12348/config.json new file mode 100644 index 0000000000000000000000000000000000000000..d32dad313e70bcb82354fd39a20fa8a666421d91 --- /dev/null +++ b/nnActive_results/Dataset083_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-random-label2__seed-12348/config.json @@ -0,0 +1,29 @@ +{ + "patch_size": [ + 32, + 74, + 74 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 200, + "trainer": "nnActiveTrainer_200epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "random-label2", + "aggregation": "patch", + "query_size": 200, + "query_steps": 5, + "agg_stride": 8, + "n_patch_per_image": 20, + "seed": 12348, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4 +} \ No newline at end of file diff --git a/nnActive_results/Dataset083_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-random-label2__seed-12348/state.json b/nnActive_results/Dataset083_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-random-label2__seed-12348/state.json new file mode 100644 index 0000000000000000000000000000000000000000..fb6727c5e2e033e1987813ca877dd93fa8e50d98 --- /dev/null +++ b/nnActive_results/Dataset083_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-random-label2__seed-12348/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 83, + "name": "AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-random-label2__seed-12348", + "loop": 4, + "preprocess": true, + "training": true, + "get_performance": true, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset108_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-power_bald__seed-12345/config.json b/nnActive_results/Dataset108_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-power_bald__seed-12345/config.json new file mode 100644 index 0000000000000000000000000000000000000000..5f8e25ae45d22c1249160f807b116ea1abc855dc --- /dev/null +++ b/nnActive_results/Dataset108_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-power_bald__seed-12345/config.json @@ -0,0 +1,29 @@ +{ + "patch_size": [ + 32, + 74, + 74 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 200, + "trainer": "nnActiveTrainer_500epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "power_bald", + "aggregation": "patch", + "query_size": 200, + "query_steps": 5, + "agg_stride": 8, + "n_patch_per_image": 20, + "seed": 12345, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4 +} \ No newline at end of file diff --git a/nnActive_results/Dataset108_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-power_bald__seed-12345/state.json b/nnActive_results/Dataset108_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-power_bald__seed-12345/state.json new file mode 100644 index 0000000000000000000000000000000000000000..0ca11616a4b959e7fbd5bbe1bd2258917ee9b948 --- /dev/null +++ b/nnActive_results/Dataset108_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-power_bald__seed-12345/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 108, + "name": "AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-power_bald__seed-12345", + "loop": 4, + "preprocess": true, + "training": true, + "get_performance": true, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset113_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-power_pe__seed-12346/config.json b/nnActive_results/Dataset113_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-power_pe__seed-12346/config.json new file mode 100644 index 0000000000000000000000000000000000000000..f4d1026f1f694b823de52b3a5be03968c12c2bf3 --- /dev/null +++ b/nnActive_results/Dataset113_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-power_pe__seed-12346/config.json @@ -0,0 +1,29 @@ +{ + "patch_size": [ + 32, + 74, + 74 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 200, + "trainer": "nnActiveTrainer_500epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "power_pe", + "aggregation": "patch", + "query_size": 200, + "query_steps": 5, + "agg_stride": 8, + "n_patch_per_image": 20, + "seed": 12346, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4 +} \ No newline at end of file diff --git a/nnActive_results/Dataset113_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-power_pe__seed-12346/state.json b/nnActive_results/Dataset113_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-power_pe__seed-12346/state.json new file mode 100644 index 0000000000000000000000000000000000000000..9ce85cbef31e0e7ca6dbd279bcfa8ad22ad6700d --- /dev/null +++ b/nnActive_results/Dataset113_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-power_pe__seed-12346/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 113, + "name": "AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-power_pe__seed-12346", + "loop": 4, + "preprocess": true, + "training": true, + "get_performance": true, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset184_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__precomputed-queries__unc-power_bald__seed-12345/config.json b/nnActive_results/Dataset184_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__precomputed-queries__unc-power_bald__seed-12345/config.json new file mode 100644 index 0000000000000000000000000000000000000000..51b9b96512f05c411bba56283872899a7ee30d5f --- /dev/null +++ b/nnActive_results/Dataset184_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__precomputed-queries__unc-power_bald__seed-12345/config.json @@ -0,0 +1,30 @@ +{ + "patch_size": [ + 32, + 74, + 74 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 200, + "trainer": "nnActiveTrainer_500epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "power_bald", + "queries_from_experiment": "AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-power_bald__seed-12345", + "aggregation": "patch", + "query_size": 200, + "query_steps": 5, + "agg_stride": 8, + "n_patch_per_image": 200, + "seed": 12345, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__precomputed-queries", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4 +} \ No newline at end of file diff --git a/nnActive_results/Dataset184_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__precomputed-queries__unc-power_bald__seed-12345/state.json b/nnActive_results/Dataset184_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__precomputed-queries__unc-power_bald__seed-12345/state.json new file mode 100644 index 0000000000000000000000000000000000000000..c955e4653d9fcee2193e1fcce8ea3d726b4b1b06 --- /dev/null +++ b/nnActive_results/Dataset184_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__precomputed-queries__unc-power_bald__seed-12345/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 184, + "name": "AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__precomputed-queries__unc-power_bald__seed-12345", + "loop": 4, + "preprocess": true, + "training": true, + "get_performance": true, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset192_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__precomputed-queries__unc-pred_entropy__seed-12345/config.json b/nnActive_results/Dataset192_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__precomputed-queries__unc-pred_entropy__seed-12345/config.json new file mode 100644 index 0000000000000000000000000000000000000000..b26ca97db8b84bfd514303bea3f9b47c9a102689 --- /dev/null +++ b/nnActive_results/Dataset192_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__precomputed-queries__unc-pred_entropy__seed-12345/config.json @@ -0,0 +1,30 @@ +{ + "patch_size": [ + 32, + 74, + 74 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 200, + "trainer": "nnActiveTrainer_500epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "pred_entropy", + "queries_from_experiment": "AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-pred_entropy__seed-12345", + "aggregation": "patch", + "query_size": 200, + "query_steps": 5, + "agg_stride": 8, + "n_patch_per_image": 200, + "seed": 12345, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__precomputed-queries", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4 +} \ No newline at end of file diff --git a/nnActive_results/Dataset192_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__precomputed-queries__unc-pred_entropy__seed-12345/state.json b/nnActive_results/Dataset192_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__precomputed-queries__unc-pred_entropy__seed-12345/state.json new file mode 100644 index 0000000000000000000000000000000000000000..03e11e55afa86aa0fa8b01e30539f8b35ef2fd9c --- /dev/null +++ b/nnActive_results/Dataset192_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__precomputed-queries__unc-pred_entropy__seed-12345/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 192, + "name": "AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__precomputed-queries__unc-pred_entropy__seed-12345", + "loop": 4, + "preprocess": true, + "training": true, + "get_performance": true, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset204_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__precomputed-queries__unc-random__seed-12345/config.json b/nnActive_results/Dataset204_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__precomputed-queries__unc-random__seed-12345/config.json new file mode 100644 index 0000000000000000000000000000000000000000..4a84cc84e1f2b465c92b02e605eb3f375e1de3d9 --- /dev/null +++ b/nnActive_results/Dataset204_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__precomputed-queries__unc-random__seed-12345/config.json @@ -0,0 +1,30 @@ +{ + "patch_size": [ + 32, + 74, + 74 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 200, + "trainer": "nnActiveTrainer_500epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "random", + "queries_from_experiment": "AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-random__seed-12345", + "aggregation": "patch", + "query_size": 200, + "query_steps": 5, + "agg_stride": 8, + "n_patch_per_image": 200, + "seed": 12345, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__precomputed-queries", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4 +} \ No newline at end of file diff --git a/nnActive_results/Dataset204_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__precomputed-queries__unc-random__seed-12345/state.json b/nnActive_results/Dataset204_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__precomputed-queries__unc-random__seed-12345/state.json new file mode 100644 index 0000000000000000000000000000000000000000..c46cb2581a94257a3035996da8fbce88bd0a96f2 --- /dev/null +++ b/nnActive_results/Dataset204_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__precomputed-queries__unc-random__seed-12345/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 204, + "name": "AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__precomputed-queries__unc-random__seed-12345", + "loop": 4, + "preprocess": true, + "training": true, + "get_performance": true, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset206_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__precomputed-queries__unc-random__seed-12347/config.json b/nnActive_results/Dataset206_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__precomputed-queries__unc-random__seed-12347/config.json new file mode 100644 index 0000000000000000000000000000000000000000..62ddb982c4f77cacbdb33b9ca414b1e48186e38b --- /dev/null +++ b/nnActive_results/Dataset206_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__precomputed-queries__unc-random__seed-12347/config.json @@ -0,0 +1,30 @@ +{ + "patch_size": [ + 32, + 74, + 74 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 200, + "trainer": "nnActiveTrainer_500epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "random", + "queries_from_experiment": "AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-random__seed-12347", + "aggregation": "patch", + "query_size": 200, + "query_steps": 5, + "agg_stride": 8, + "n_patch_per_image": 200, + "seed": 12347, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__precomputed-queries", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4 +} \ No newline at end of file diff --git a/nnActive_results/Dataset206_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__precomputed-queries__unc-random__seed-12347/state.json b/nnActive_results/Dataset206_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__precomputed-queries__unc-random__seed-12347/state.json new file mode 100644 index 0000000000000000000000000000000000000000..0f2f6d1b95176f5f91b4a4b5b3060aa3f608411d --- /dev/null +++ b/nnActive_results/Dataset206_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__precomputed-queries__unc-random__seed-12347/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 206, + "name": "AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__precomputed-queries__unc-random__seed-12347", + "loop": 4, + "preprocess": true, + "training": true, + "get_performance": true, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset207_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__precomputed-queries__unc-random__seed-12348/config.json b/nnActive_results/Dataset207_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__precomputed-queries__unc-random__seed-12348/config.json new file mode 100644 index 0000000000000000000000000000000000000000..2ed9a658cb084604765641099bd2f1dd5fc98f1d --- /dev/null +++ b/nnActive_results/Dataset207_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__precomputed-queries__unc-random__seed-12348/config.json @@ -0,0 +1,30 @@ +{ + "patch_size": [ + 32, + 74, + 74 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 200, + "trainer": "nnActiveTrainer_500epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "random", + "queries_from_experiment": "AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-random__seed-12348", + "aggregation": "patch", + "query_size": 200, + "query_steps": 5, + "agg_stride": 8, + "n_patch_per_image": 200, + "seed": 12348, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__precomputed-queries", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4 +} \ No newline at end of file diff --git a/nnActive_results/Dataset207_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__precomputed-queries__unc-random__seed-12348/state.json b/nnActive_results/Dataset207_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__precomputed-queries__unc-random__seed-12348/state.json new file mode 100644 index 0000000000000000000000000000000000000000..61e355d7058e6cde908b2b8017907b2283a689c3 --- /dev/null +++ b/nnActive_results/Dataset207_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__precomputed-queries__unc-random__seed-12348/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 207, + "name": "AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__precomputed-queries__unc-random__seed-12348", + "loop": 4, + "preprocess": true, + "training": true, + "get_performance": true, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset214_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-20__unc-mutual_information__seed-12347/config.json b/nnActive_results/Dataset214_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-20__unc-mutual_information__seed-12347/config.json new file mode 100644 index 0000000000000000000000000000000000000000..411afe025726a57df5103d2faab031351737b17b --- /dev/null +++ b/nnActive_results/Dataset214_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-20__unc-mutual_information__seed-12347/config.json @@ -0,0 +1,30 @@ +{ + "patch_size": [ + 32, + 74, + 74 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 40, + "trainer": "nnActiveTrainer_200epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "mutual_information", + "queries_from_experiment": null, + "aggregation": "patch", + "query_size": 20, + "query_steps": 9, + "agg_stride": 8, + "n_patch_per_image": 20, + "seed": 12347, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-20", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4 +} \ No newline at end of file diff --git a/nnActive_results/Dataset214_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-20__unc-mutual_information__seed-12347/state.json b/nnActive_results/Dataset214_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-20__unc-mutual_information__seed-12347/state.json new file mode 100644 index 0000000000000000000000000000000000000000..4e4108d49eeb4284c9b3822b3c956af11f622187 --- /dev/null +++ b/nnActive_results/Dataset214_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-20__unc-mutual_information__seed-12347/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 214, + "name": "AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-20__unc-mutual_information__seed-12347", + "loop": 8, + "preprocess": true, + "training": true, + "get_performance": true, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset216_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-20__unc-power_bald__seed-12345/config.json b/nnActive_results/Dataset216_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-20__unc-power_bald__seed-12345/config.json new file mode 100644 index 0000000000000000000000000000000000000000..3ebfb19d53841452e0b2d518fe09abd58b1ecc93 --- /dev/null +++ b/nnActive_results/Dataset216_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-20__unc-power_bald__seed-12345/config.json @@ -0,0 +1,30 @@ +{ + "patch_size": [ + 32, + 74, + 74 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 40, + "trainer": "nnActiveTrainer_200epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "power_bald", + "queries_from_experiment": null, + "aggregation": "patch", + "query_size": 20, + "query_steps": 9, + "agg_stride": 8, + "n_patch_per_image": 20, + "seed": 12345, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-20", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4 +} \ No newline at end of file diff --git a/nnActive_results/Dataset216_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-20__unc-power_bald__seed-12345/state.json b/nnActive_results/Dataset216_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-20__unc-power_bald__seed-12345/state.json new file mode 100644 index 0000000000000000000000000000000000000000..af21ffaa01e637a8743bb95a1fd6ab234d32b68e --- /dev/null +++ b/nnActive_results/Dataset216_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-20__unc-power_bald__seed-12345/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 216, + "name": "AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-20__unc-power_bald__seed-12345", + "loop": 8, + "preprocess": true, + "training": true, + "get_performance": true, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset244_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-250__unc-mutual_information__seed-12345/config.json b/nnActive_results/Dataset244_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-250__unc-mutual_information__seed-12345/config.json new file mode 100644 index 0000000000000000000000000000000000000000..a3862637499cbc4b286251512446c41947ac3ce4 --- /dev/null +++ b/nnActive_results/Dataset244_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-250__unc-mutual_information__seed-12345/config.json @@ -0,0 +1,30 @@ +{ + "patch_size": [ + 32, + 74, + 74 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 500, + "trainer": "nnActiveTrainer_200epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "mutual_information", + "queries_from_experiment": null, + "aggregation": "patch", + "query_size": 250, + "query_steps": 9, + "agg_stride": 8, + "n_patch_per_image": 250, + "seed": 12345, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-250", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4 +} \ No newline at end of file diff --git a/nnActive_results/Dataset244_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-250__unc-mutual_information__seed-12345/state.json b/nnActive_results/Dataset244_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-250__unc-mutual_information__seed-12345/state.json new file mode 100644 index 0000000000000000000000000000000000000000..aefaed7bddba73ed29591c3b056023c0d55b25da --- /dev/null +++ b/nnActive_results/Dataset244_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-250__unc-mutual_information__seed-12345/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 244, + "name": "AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-250__unc-mutual_information__seed-12345", + "loop": 8, + "preprocess": true, + "training": true, + "get_performance": true, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset251_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-250__unc-power_bald__seed-12348/config.json b/nnActive_results/Dataset251_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-250__unc-power_bald__seed-12348/config.json new file mode 100644 index 0000000000000000000000000000000000000000..3784eb4fd45ea64acc3bbf1aad29c5ba1d5a38fe --- /dev/null +++ b/nnActive_results/Dataset251_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-250__unc-power_bald__seed-12348/config.json @@ -0,0 +1,30 @@ +{ + "patch_size": [ + 32, + 74, + 74 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 500, + "trainer": "nnActiveTrainer_200epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "power_bald", + "queries_from_experiment": null, + "aggregation": "patch", + "query_size": 250, + "query_steps": 9, + "agg_stride": 8, + "n_patch_per_image": 250, + "seed": 12348, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-250", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4 +} \ No newline at end of file diff --git a/nnActive_results/Dataset251_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-250__unc-power_bald__seed-12348/state.json b/nnActive_results/Dataset251_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-250__unc-power_bald__seed-12348/state.json new file mode 100644 index 0000000000000000000000000000000000000000..168fc63c43eefe41585454844391f3c1ad7ac7d8 --- /dev/null +++ b/nnActive_results/Dataset251_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-250__unc-power_bald__seed-12348/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 251, + "name": "AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-250__unc-power_bald__seed-12348", + "loop": 8, + "preprocess": true, + "training": true, + "get_performance": true, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset302_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-softrank_bald__seed-12347/config.json b/nnActive_results/Dataset302_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-softrank_bald__seed-12347/config.json new file mode 100644 index 0000000000000000000000000000000000000000..a355e6332560ab0c72bf0e02505631aecde1db59 --- /dev/null +++ b/nnActive_results/Dataset302_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-softrank_bald__seed-12347/config.json @@ -0,0 +1,30 @@ +{ + "patch_size": [ + 32, + 74, + 74 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 500, + "trainer": "nnActiveTrainer_500epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "softrank_bald", + "queries_from_experiment": null, + "aggregation": "patch", + "query_size": 500, + "query_steps": 5, + "agg_stride": 8, + "n_patch_per_image": 20, + "seed": 12347, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4 +} \ No newline at end of file diff --git a/nnActive_results/Dataset302_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-softrank_bald__seed-12347/state.json b/nnActive_results/Dataset302_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-softrank_bald__seed-12347/state.json new file mode 100644 index 0000000000000000000000000000000000000000..0c50b8519c3e1381bf965cf4e51fd82098ac4f77 --- /dev/null +++ b/nnActive_results/Dataset302_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-softrank_bald__seed-12347/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 302, + "name": "AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-softrank_bald__seed-12347", + "loop": 4, + "preprocess": true, + "training": true, + "get_performance": true, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset312_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__precomputed-queries__unc-power_pe__seed-12345/config.json b/nnActive_results/Dataset312_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__precomputed-queries__unc-power_pe__seed-12345/config.json new file mode 100644 index 0000000000000000000000000000000000000000..2c3212f862bf32bfb8833563fc322e008e1e0276 --- /dev/null +++ b/nnActive_results/Dataset312_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__precomputed-queries__unc-power_pe__seed-12345/config.json @@ -0,0 +1,30 @@ +{ + "patch_size": [ + 32, + 74, + 74 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 500, + "trainer": "nnActiveTrainer_500epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "power_pe", + "queries_from_experiment": "AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-power_pe__seed-12345", + "aggregation": "patch", + "query_size": 500, + "query_steps": 5, + "agg_stride": 8, + "n_patch_per_image": 500, + "seed": 12345, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__precomputed-queries", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4 +} \ No newline at end of file diff --git a/nnActive_results/Dataset312_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__precomputed-queries__unc-power_pe__seed-12345/state.json b/nnActive_results/Dataset312_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__precomputed-queries__unc-power_pe__seed-12345/state.json new file mode 100644 index 0000000000000000000000000000000000000000..dcc5bdb6fc92772078be5c02fa5237dbc8df4db8 --- /dev/null +++ b/nnActive_results/Dataset312_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__precomputed-queries__unc-power_pe__seed-12345/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 312, + "name": "AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__precomputed-queries__unc-power_pe__seed-12345", + "loop": 4, + "preprocess": true, + "training": true, + "get_performance": true, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset320_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__precomputed-queries__unc-random-label2__seed-12345/config.json b/nnActive_results/Dataset320_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__precomputed-queries__unc-random-label2__seed-12345/config.json new file mode 100644 index 0000000000000000000000000000000000000000..a8202b51379091e988cf3b119a24df57499db158 --- /dev/null +++ b/nnActive_results/Dataset320_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__precomputed-queries__unc-random-label2__seed-12345/config.json @@ -0,0 +1,30 @@ +{ + "patch_size": [ + 32, + 74, + 74 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 500, + "trainer": "nnActiveTrainer_500epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "random-label2", + "queries_from_experiment": "AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-random-label2__seed-12345", + "aggregation": "patch", + "query_size": 500, + "query_steps": 5, + "agg_stride": 8, + "n_patch_per_image": 500, + "seed": 12345, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__precomputed-queries", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4 +} \ No newline at end of file diff --git a/nnActive_results/Dataset320_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__precomputed-queries__unc-random-label2__seed-12345/state.json b/nnActive_results/Dataset320_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__precomputed-queries__unc-random-label2__seed-12345/state.json new file mode 100644 index 0000000000000000000000000000000000000000..48ccbd3a3f6bb0bac48487763781893a8d2704bb --- /dev/null +++ b/nnActive_results/Dataset320_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__precomputed-queries__unc-random-label2__seed-12345/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 320, + "name": "AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__precomputed-queries__unc-random-label2__seed-12345", + "loop": 4, + "preprocess": true, + "training": true, + "get_performance": true, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset351_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-1000__unc-pred_entropy__seed-12348/config.json b/nnActive_results/Dataset351_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-1000__unc-pred_entropy__seed-12348/config.json new file mode 100644 index 0000000000000000000000000000000000000000..42d7882100012f84062fc4522ffcecd339ef9cff --- /dev/null +++ b/nnActive_results/Dataset351_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-1000__unc-pred_entropy__seed-12348/config.json @@ -0,0 +1,30 @@ +{ + "patch_size": [ + 32, + 74, + 74 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 500, + "trainer": "nnActiveTrainer_200epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "pred_entropy", + "queries_from_experiment": null, + "aggregation": "patch", + "query_size": 1000, + "query_steps": 3, + "agg_stride": 8, + "n_patch_per_image": 1000, + "seed": 12348, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-1000", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4 +} \ No newline at end of file diff --git a/nnActive_results/Dataset351_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-1000__unc-pred_entropy__seed-12348/state.json b/nnActive_results/Dataset351_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-1000__unc-pred_entropy__seed-12348/state.json new file mode 100644 index 0000000000000000000000000000000000000000..3a2bee5f157ce7f0f82ddc07aa8974162a65383f --- /dev/null +++ b/nnActive_results/Dataset351_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-1000__unc-pred_entropy__seed-12348/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 351, + "name": "AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-1000__unc-pred_entropy__seed-12348", + "loop": 2, + "preprocess": true, + "training": true, + "get_performance": true, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset357_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-1000__unc-random-label__seed-12346/config.json b/nnActive_results/Dataset357_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-1000__unc-random-label__seed-12346/config.json new file mode 100644 index 0000000000000000000000000000000000000000..a6bebbe8c43c97fe745d730bf9c723e598f2e823 --- /dev/null +++ b/nnActive_results/Dataset357_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-1000__unc-random-label__seed-12346/config.json @@ -0,0 +1,30 @@ +{ + "patch_size": [ + 32, + 74, + 74 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 500, + "trainer": "nnActiveTrainer_200epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "random-label", + "queries_from_experiment": null, + "aggregation": "patch", + "query_size": 1000, + "query_steps": 3, + "agg_stride": 8, + "n_patch_per_image": 1000, + "seed": 12346, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-1000", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4 +} \ No newline at end of file diff --git a/nnActive_results/Dataset357_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-1000__unc-random-label__seed-12346/state.json b/nnActive_results/Dataset357_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-1000__unc-random-label__seed-12346/state.json new file mode 100644 index 0000000000000000000000000000000000000000..372965bf0e07eebdc9af4fa4bde7754be26fba35 --- /dev/null +++ b/nnActive_results/Dataset357_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-1000__unc-random-label__seed-12346/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 357, + "name": "AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-1000__unc-random-label__seed-12346", + "loop": 2, + "preprocess": true, + "training": true, + "get_performance": true, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset359_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-1000__unc-random-label__seed-12348/config.json b/nnActive_results/Dataset359_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-1000__unc-random-label__seed-12348/config.json new file mode 100644 index 0000000000000000000000000000000000000000..2b3b64349be39c2e7a1835ba94c92bf70c2c72f9 --- /dev/null +++ b/nnActive_results/Dataset359_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-1000__unc-random-label__seed-12348/config.json @@ -0,0 +1,30 @@ +{ + "patch_size": [ + 32, + 74, + 74 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 500, + "trainer": "nnActiveTrainer_200epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "random-label", + "queries_from_experiment": null, + "aggregation": "patch", + "query_size": 1000, + "query_steps": 3, + "agg_stride": 8, + "n_patch_per_image": 1000, + "seed": 12348, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-1000", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4 +} \ No newline at end of file diff --git a/nnActive_results/Dataset359_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-1000__unc-random-label__seed-12348/state.json b/nnActive_results/Dataset359_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-1000__unc-random-label__seed-12348/state.json new file mode 100644 index 0000000000000000000000000000000000000000..568f265309fc01e1de12c5627634f9226521ac04 --- /dev/null +++ b/nnActive_results/Dataset359_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-1000__unc-random-label__seed-12348/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 359, + "name": "AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-1000__unc-random-label__seed-12348", + "loop": 2, + "preprocess": true, + "training": true, + "get_performance": true, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset378_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-80__unc-power_pe__seed-12347/config.json b/nnActive_results/Dataset378_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-80__unc-power_pe__seed-12347/config.json new file mode 100644 index 0000000000000000000000000000000000000000..2f493c3710d8870cfcecdb2ba1e998d1a1a6ebd3 --- /dev/null +++ b/nnActive_results/Dataset378_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-80__unc-power_pe__seed-12347/config.json @@ -0,0 +1,30 @@ +{ + "patch_size": [ + 32, + 74, + 74 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 40, + "trainer": "nnActiveTrainer_200epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "power_pe", + "queries_from_experiment": null, + "aggregation": "patch", + "query_size": 80, + "query_steps": 3, + "agg_stride": 8, + "n_patch_per_image": 80, + "seed": 12347, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-80", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4 +} \ No newline at end of file diff --git a/nnActive_results/Dataset378_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-80__unc-power_pe__seed-12347/state.json b/nnActive_results/Dataset378_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-80__unc-power_pe__seed-12347/state.json new file mode 100644 index 0000000000000000000000000000000000000000..89993bf02b8c8b3eeea2b7c6606418c71a3139b8 --- /dev/null +++ b/nnActive_results/Dataset378_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-80__unc-power_pe__seed-12347/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 378, + "name": "AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-80__unc-power_pe__seed-12347", + "loop": 2, + "preprocess": true, + "training": true, + "get_performance": true, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset393_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-80__unc-random__seed-12346/config.json b/nnActive_results/Dataset393_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-80__unc-random__seed-12346/config.json new file mode 100644 index 0000000000000000000000000000000000000000..2ffad6facd39d3f5d30cd7fae3a5ce8126b23238 --- /dev/null +++ b/nnActive_results/Dataset393_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-80__unc-random__seed-12346/config.json @@ -0,0 +1,30 @@ +{ + "patch_size": [ + 32, + 74, + 74 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 40, + "trainer": "nnActiveTrainer_200epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "random", + "queries_from_experiment": null, + "aggregation": "patch", + "query_size": 80, + "query_steps": 3, + "agg_stride": 8, + "n_patch_per_image": 80, + "seed": 12346, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-80", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4 +} \ No newline at end of file diff --git a/nnActive_results/Dataset393_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-80__unc-random__seed-12346/state.json b/nnActive_results/Dataset393_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-80__unc-random__seed-12346/state.json new file mode 100644 index 0000000000000000000000000000000000000000..41a2da1a67813cc26e88a5757882ea138950b7c5 --- /dev/null +++ b/nnActive_results/Dataset393_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-80__unc-random__seed-12346/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 393, + "name": "AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-80__unc-random__seed-12346", + "loop": 2, + "preprocess": true, + "training": true, + "get_performance": true, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset455_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-40__qs-40__unc-random-label__seed-12348/config.json b/nnActive_results/Dataset455_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-40__qs-40__unc-random-label__seed-12348/config.json new file mode 100644 index 0000000000000000000000000000000000000000..d8940240a55e304e978968e16bda0b85d58735a8 --- /dev/null +++ b/nnActive_results/Dataset455_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-40__qs-40__unc-random-label__seed-12348/config.json @@ -0,0 +1,30 @@ +{ + "patch_size": [ + 16, + 32, + 32 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 40, + "trainer": "nnActiveTrainer_200epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "random-label", + "queries_from_experiment": null, + "aggregation": "patch", + "query_size": 40, + "query_steps": 5, + "agg_stride": 8, + "n_patch_per_image": 40, + "seed": 12348, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__patch-16_32_32__sb-random-label2-all-classes__sbs-40__qs-40", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4 +} \ No newline at end of file diff --git a/nnActive_results/Dataset455_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-40__qs-40__unc-random-label__seed-12348/state.json b/nnActive_results/Dataset455_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-40__qs-40__unc-random-label__seed-12348/state.json new file mode 100644 index 0000000000000000000000000000000000000000..a6529e81ea87057f8792a8af2707de4559a8b6cc --- /dev/null +++ b/nnActive_results/Dataset455_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-40__qs-40__unc-random-label__seed-12348/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 455, + "name": "AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-40__qs-40__unc-random-label__seed-12348", + "loop": 4, + "preprocess": true, + "training": true, + "get_performance": true, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset461_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-40__qs-40__unc-softrank_bald__seed-12346/state.json b/nnActive_results/Dataset461_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-40__qs-40__unc-softrank_bald__seed-12346/state.json new file mode 100644 index 0000000000000000000000000000000000000000..e81508db721c0b70eb7a2cc7a4569627872cef55 --- /dev/null +++ b/nnActive_results/Dataset461_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-40__qs-40__unc-softrank_bald__seed-12346/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 461, + "name": "AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-40__qs-40__unc-softrank_bald__seed-12346", + "loop": 4, + "preprocess": true, + "training": true, + "get_performance": true, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset463_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-40__qs-40__unc-softrank_bald__seed-12348/config.json b/nnActive_results/Dataset463_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-40__qs-40__unc-softrank_bald__seed-12348/config.json new file mode 100644 index 0000000000000000000000000000000000000000..8aefeac8f8b2fc76cccc625b552162e249f787a1 --- /dev/null +++ b/nnActive_results/Dataset463_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-40__qs-40__unc-softrank_bald__seed-12348/config.json @@ -0,0 +1,30 @@ +{ + "patch_size": [ + 16, + 32, + 32 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 40, + "trainer": "nnActiveTrainer_200epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "softrank_bald", + "queries_from_experiment": null, + "aggregation": "patch", + "query_size": 40, + "query_steps": 5, + "agg_stride": 8, + "n_patch_per_image": 40, + "seed": 12348, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__patch-16_32_32__sb-random-label2-all-classes__sbs-40__qs-40", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4 +} \ No newline at end of file diff --git a/nnActive_results/Dataset463_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-40__qs-40__unc-softrank_bald__seed-12348/state.json b/nnActive_results/Dataset463_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-40__qs-40__unc-softrank_bald__seed-12348/state.json new file mode 100644 index 0000000000000000000000000000000000000000..1e361530c30eb0df458b77309fd9950f552bf77a --- /dev/null +++ b/nnActive_results/Dataset463_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-40__qs-40__unc-softrank_bald__seed-12348/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 463, + "name": "AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-40__qs-40__unc-softrank_bald__seed-12348", + "loop": 4, + "preprocess": true, + "training": true, + "get_performance": true, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset469_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-200__qs-200__unc-power_bald__seed-12346/config.json b/nnActive_results/Dataset469_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-200__qs-200__unc-power_bald__seed-12346/config.json new file mode 100644 index 0000000000000000000000000000000000000000..f73189e620ae2c8746912dade295c8ffc380f4d2 --- /dev/null +++ b/nnActive_results/Dataset469_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-200__qs-200__unc-power_bald__seed-12346/config.json @@ -0,0 +1,30 @@ +{ + "patch_size": [ + 16, + 32, + 32 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 200, + "trainer": "nnActiveTrainer_200epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "power_bald", + "queries_from_experiment": null, + "aggregation": "patch", + "query_size": 200, + "query_steps": 5, + "agg_stride": 8, + "n_patch_per_image": 200, + "seed": 12346, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__patch-16_32_32__sb-random-label2-all-classes__sbs-200__qs-200", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4 +} \ No newline at end of file diff --git a/nnActive_results/Dataset469_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-200__qs-200__unc-power_bald__seed-12346/state.json b/nnActive_results/Dataset469_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-200__qs-200__unc-power_bald__seed-12346/state.json new file mode 100644 index 0000000000000000000000000000000000000000..a888e4213f816e7cd69ce444866398fc45b53616 --- /dev/null +++ b/nnActive_results/Dataset469_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-200__qs-200__unc-power_bald__seed-12346/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 469, + "name": "AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-200__qs-200__unc-power_bald__seed-12346", + "loop": 4, + "preprocess": true, + "training": true, + "get_performance": true, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset514_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-500__qs-500__unc-random-label2__seed-12347/config.json b/nnActive_results/Dataset514_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-500__qs-500__unc-random-label2__seed-12347/config.json new file mode 100644 index 0000000000000000000000000000000000000000..3bd9940fa8cdb8f8c8ffedfc7dc7ddb95d6316b0 --- /dev/null +++ b/nnActive_results/Dataset514_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-500__qs-500__unc-random-label2__seed-12347/config.json @@ -0,0 +1,30 @@ +{ + "patch_size": [ + 16, + 32, + 32 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 500, + "trainer": "nnActiveTrainer_200epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "random-label2", + "queries_from_experiment": null, + "aggregation": "patch", + "query_size": 500, + "query_steps": 5, + "agg_stride": 8, + "n_patch_per_image": 500, + "seed": 12347, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__patch-16_32_32__sb-random-label2-all-classes__sbs-500__qs-500", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4 +} \ No newline at end of file diff --git a/nnActive_results/Dataset514_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-500__qs-500__unc-random-label2__seed-12347/state.json b/nnActive_results/Dataset514_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-500__qs-500__unc-random-label2__seed-12347/state.json new file mode 100644 index 0000000000000000000000000000000000000000..ebe50ad2ab8b2d48b77dd04a62e5b3db88eb82b2 --- /dev/null +++ b/nnActive_results/Dataset514_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-500__qs-500__unc-random-label2__seed-12347/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 514, + "name": "AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-500__qs-500__unc-random-label2__seed-12347", + "loop": 4, + "preprocess": true, + "training": true, + "get_performance": true, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset520_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-500__qs-500__unc-random__seed-12345/config.json b/nnActive_results/Dataset520_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-500__qs-500__unc-random__seed-12345/config.json new file mode 100644 index 0000000000000000000000000000000000000000..1cbb055a66adb9a3e545894277bf94e05e54fd64 --- /dev/null +++ b/nnActive_results/Dataset520_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-500__qs-500__unc-random__seed-12345/config.json @@ -0,0 +1,30 @@ +{ + "patch_size": [ + 16, + 32, + 32 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 500, + "trainer": "nnActiveTrainer_200epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "random", + "queries_from_experiment": null, + "aggregation": "patch", + "query_size": 500, + "query_steps": 5, + "agg_stride": 8, + "n_patch_per_image": 500, + "seed": 12345, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__patch-16_32_32__sb-random-label2-all-classes__sbs-500__qs-500", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4 +} \ No newline at end of file diff --git a/nnActive_results/Dataset520_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-500__qs-500__unc-random__seed-12345/state.json b/nnActive_results/Dataset520_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-500__qs-500__unc-random__seed-12345/state.json new file mode 100644 index 0000000000000000000000000000000000000000..8ab13e084c1d98b90209b645d2cb9c78506d06a8 --- /dev/null +++ b/nnActive_results/Dataset520_AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-500__qs-500__unc-random__seed-12345/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 520, + "name": "AMOS2022_task1__patch-16_32_32__sb-random-label2-all-classes__sbs-500__qs-500__unc-random__seed-12345", + "loop": 4, + "preprocess": true, + "training": true, + "get_performance": true, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset548_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-class_pe33__seed-12348/state.json b/nnActive_results/Dataset548_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-class_pe33__seed-12348/state.json new file mode 100644 index 0000000000000000000000000000000000000000..d452122a38db8a5ea6ad6c97a4b4b8975ee42979 --- /dev/null +++ b/nnActive_results/Dataset548_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-class_pe33__seed-12348/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 548, + "name": "AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-class_pe33__seed-12348", + "loop": 4, + "preprocess": true, + "training": true, + "get_performance": true, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset578_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-40__unc-class_power_pe66_sharp_sigmoid__seed-12345/config.json b/nnActive_results/Dataset578_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-40__unc-class_power_pe66_sharp_sigmoid__seed-12345/config.json new file mode 100644 index 0000000000000000000000000000000000000000..583a6bb18413dc944db0e4bf2ad6c5dce21ae79f --- /dev/null +++ b/nnActive_results/Dataset578_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-40__unc-class_power_pe66_sharp_sigmoid__seed-12345/config.json @@ -0,0 +1,30 @@ +{ + "patch_size": [ + 32, + 74, + 74 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 40, + "trainer": "nnActiveTrainer_200epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "class_power_pe66_sharp_sigmoid", + "queries_from_experiment": null, + "aggregation": "patch", + "query_size": 40, + "query_steps": 5, + "agg_stride": 8, + "n_patch_per_image": 20, + "seed": 12345, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-40", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4 +} \ No newline at end of file diff --git a/nnActive_results/Dataset578_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-40__unc-class_power_pe66_sharp_sigmoid__seed-12345/state.json b/nnActive_results/Dataset578_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-40__unc-class_power_pe66_sharp_sigmoid__seed-12345/state.json new file mode 100644 index 0000000000000000000000000000000000000000..60ae89a0dd7061d07589cec4fcb97ac9a66509e7 --- /dev/null +++ b/nnActive_results/Dataset578_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-40__unc-class_power_pe66_sharp_sigmoid__seed-12345/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 578, + "name": "AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-40__unc-class_power_pe66_sharp_sigmoid__seed-12345", + "loop": 4, + "preprocess": true, + "training": true, + "get_performance": true, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset584_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-class_power_pe66_sharp_sigmoid__seed-12345/config.json b/nnActive_results/Dataset584_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-class_power_pe66_sharp_sigmoid__seed-12345/config.json new file mode 100644 index 0000000000000000000000000000000000000000..555ad8efdb8022a09eeb688834c09a1ef0f88ea0 --- /dev/null +++ b/nnActive_results/Dataset584_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-class_power_pe66_sharp_sigmoid__seed-12345/config.json @@ -0,0 +1,30 @@ +{ + "patch_size": [ + 32, + 74, + 74 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 500, + "trainer": "nnActiveTrainer_200epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "class_power_pe66_sharp_sigmoid", + "queries_from_experiment": null, + "aggregation": "patch", + "query_size": 500, + "query_steps": 5, + "agg_stride": 8, + "n_patch_per_image": 20, + "seed": 12345, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4 +} \ No newline at end of file diff --git a/nnActive_results/Dataset584_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-class_power_pe66_sharp_sigmoid__seed-12345/state.json b/nnActive_results/Dataset584_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-class_power_pe66_sharp_sigmoid__seed-12345/state.json new file mode 100644 index 0000000000000000000000000000000000000000..0857335ce36e0bdae63b53ec77cc36d52c1716a8 --- /dev/null +++ b/nnActive_results/Dataset584_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-class_power_pe66_sharp_sigmoid__seed-12345/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 584, + "name": "AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-class_power_pe66_sharp_sigmoid__seed-12345", + "loop": 4, + "preprocess": true, + "training": true, + "get_performance": true, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset594_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-40__unc-random-label2__seed-12345/config.json b/nnActive_results/Dataset594_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-40__unc-random-label2__seed-12345/config.json new file mode 100644 index 0000000000000000000000000000000000000000..e9d6507ae8aae92d328b877c79c5b412793d5ed1 --- /dev/null +++ b/nnActive_results/Dataset594_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-40__unc-random-label2__seed-12345/config.json @@ -0,0 +1,30 @@ +{ + "patch_size": [ + 32, + 74, + 74 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 40, + "trainer": "nnActiveTrainer_500epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "random-label2", + "queries_from_experiment": null, + "aggregation": "patch", + "query_size": 40, + "query_steps": 5, + "agg_stride": 8, + "n_patch_per_image": 20, + "seed": 12345, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-40", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4 +} \ No newline at end of file diff --git a/nnActive_results/Dataset602_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-40__unc-class_power_pe66_exp__seed-12347/config.json b/nnActive_results/Dataset602_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-40__unc-class_power_pe66_exp__seed-12347/config.json new file mode 100644 index 0000000000000000000000000000000000000000..53ef65c6ca4e3a555171d0e592ba1eb3cd449cd7 --- /dev/null +++ b/nnActive_results/Dataset602_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-40__unc-class_power_pe66_exp__seed-12347/config.json @@ -0,0 +1,30 @@ +{ + "patch_size": [ + 32, + 74, + 74 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 40, + "trainer": "nnActiveTrainer_200epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "class_power_pe66_exp", + "queries_from_experiment": null, + "aggregation": "patch", + "query_size": 40, + "query_steps": 5, + "agg_stride": 8, + "n_patch_per_image": 20, + "seed": 12347, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-40", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4 +} \ No newline at end of file diff --git a/nnActive_results/Dataset602_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-40__unc-class_power_pe66_exp__seed-12347/state.json b/nnActive_results/Dataset602_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-40__unc-class_power_pe66_exp__seed-12347/state.json new file mode 100644 index 0000000000000000000000000000000000000000..bee83f7f723f834e63ad13ed8ba6ec0a894ad600 --- /dev/null +++ b/nnActive_results/Dataset602_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-40__unc-class_power_pe66_exp__seed-12347/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 602, + "name": "AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-40__qs-40__unc-class_power_pe66_exp__seed-12347", + "loop": 4, + "preprocess": true, + "training": true, + "get_performance": true, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset615_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-class_power_pe66_exp__seed-12348/config.json b/nnActive_results/Dataset615_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-class_power_pe66_exp__seed-12348/config.json new file mode 100644 index 0000000000000000000000000000000000000000..637cb4a54fa60dbf643fd695a9c5a6aabc8222a6 --- /dev/null +++ b/nnActive_results/Dataset615_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-class_power_pe66_exp__seed-12348/config.json @@ -0,0 +1,30 @@ +{ + "patch_size": [ + 32, + 74, + 74 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 500, + "trainer": "nnActiveTrainer_500epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "class_power_pe66_exp", + "queries_from_experiment": null, + "aggregation": "patch", + "query_size": 500, + "query_steps": 5, + "agg_stride": 8, + "n_patch_per_image": 20, + "seed": 12348, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4 +} \ No newline at end of file diff --git a/nnActive_results/Dataset615_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-class_power_pe66_exp__seed-12348/state.json b/nnActive_results/Dataset615_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-class_power_pe66_exp__seed-12348/state.json new file mode 100644 index 0000000000000000000000000000000000000000..6b0f46e0cbabf8f99643e9696499608779cd4f40 --- /dev/null +++ b/nnActive_results/Dataset615_AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-class_power_pe66_exp__seed-12348/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 615, + "name": "AMOS2022_task1__tr-nnActiveTrainer_500epochs__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-class_power_pe66_exp__seed-12348", + "loop": 4, + "preprocess": true, + "training": true, + "get_performance": true, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset636_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-class_power_pe66__seed-12345/config.json b/nnActive_results/Dataset636_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-class_power_pe66__seed-12345/config.json new file mode 100644 index 0000000000000000000000000000000000000000..e8cb92d9ce7d243bbd433a29bbb1b28ea66c99f5 --- /dev/null +++ b/nnActive_results/Dataset636_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-class_power_pe66__seed-12345/config.json @@ -0,0 +1,32 @@ +{ + "patch_size": [ + 32, + 74, + 74 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 200, + "trainer": "nnActiveTrainer_200epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "class_power_pe66", + "queries_from_experiment": null, + "aggregation": "patch", + "query_size": 200, + "query_steps": 5, + "agg_stride": 8, + "n_patch_per_image": 20, + "seed": 12345, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4, + "pred_tile_step_size": 0.5, + "disable_pred_tta": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset636_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-class_power_pe66__seed-12345/state.json b/nnActive_results/Dataset636_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-class_power_pe66__seed-12345/state.json new file mode 100644 index 0000000000000000000000000000000000000000..8d12d6f9003bfc1c813e264301d38a93a4f9d387 --- /dev/null +++ b/nnActive_results/Dataset636_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-class_power_pe66__seed-12345/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 636, + "name": "AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-class_power_pe66__seed-12345", + "loop": 4, + "preprocess": true, + "training": true, + "get_performance": true, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset638_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-class_power_pe66__seed-12347/config.json b/nnActive_results/Dataset638_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-class_power_pe66__seed-12347/config.json new file mode 100644 index 0000000000000000000000000000000000000000..df964a12241187f2b5c1650d5a54ce9bfce8fcad --- /dev/null +++ b/nnActive_results/Dataset638_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-class_power_pe66__seed-12347/config.json @@ -0,0 +1,32 @@ +{ + "patch_size": [ + 32, + 74, + 74 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 200, + "trainer": "nnActiveTrainer_200epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "class_power_pe66", + "queries_from_experiment": null, + "aggregation": "patch", + "query_size": 200, + "query_steps": 5, + "agg_stride": 8, + "n_patch_per_image": 20, + "seed": 12347, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4, + "pred_tile_step_size": 0.5, + "disable_pred_tta": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset638_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-class_power_pe66__seed-12347/state.json b/nnActive_results/Dataset638_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-class_power_pe66__seed-12347/state.json new file mode 100644 index 0000000000000000000000000000000000000000..cdeb61401342411cabe500905e271c0cbb90ea30 --- /dev/null +++ b/nnActive_results/Dataset638_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-class_power_pe66__seed-12347/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 638, + "name": "AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-200__qs-200__unc-class_power_pe66__seed-12347", + "loop": 4, + "preprocess": true, + "training": true, + "get_performance": true, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset647_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-class_power_pe66__seed-12348/config.json b/nnActive_results/Dataset647_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-class_power_pe66__seed-12348/config.json new file mode 100644 index 0000000000000000000000000000000000000000..cdcac4d4a831a313d52139946efeee8eddd98ad5 --- /dev/null +++ b/nnActive_results/Dataset647_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-class_power_pe66__seed-12348/config.json @@ -0,0 +1,32 @@ +{ + "patch_size": [ + 32, + 74, + 74 + ], + "base_id": 216, + "starting_budget": "random-label2-all-classes", + "starting_budget_size": 500, + "trainer": "nnActiveTrainer_200epochs", + "model_plans": "nnUNetPlans", + "model_config": "3d_fullres", + "uncertainty": "class_power_pe66", + "queries_from_experiment": null, + "aggregation": "patch", + "query_size": 500, + "query_steps": 5, + "agg_stride": 8, + "n_patch_per_image": 20, + "seed": 12348, + "full_folds": 5, + "train_folds": 5, + "dataset": "Dataset216_AMOS2022_task1", + "pre_suffix": "__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500", + "use_mirroring": false, + "use_gaussian": true, + "tile_step_size": 0.75, + "patch_overlap": 0.0, + "additional_overlap": 0.4, + "pred_tile_step_size": 0.5, + "disable_pred_tta": false +} \ No newline at end of file diff --git a/nnActive_results/Dataset647_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-class_power_pe66__seed-12348/state.json b/nnActive_results/Dataset647_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-class_power_pe66__seed-12348/state.json new file mode 100644 index 0000000000000000000000000000000000000000..89dce0d62d46630c47dbfb5c809103c069421f6e --- /dev/null +++ b/nnActive_results/Dataset647_AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-class_power_pe66__seed-12348/state.json @@ -0,0 +1,12 @@ +{ + "dataset_id": 647, + "name": "AMOS2022_task1__patch-32_74_74__sb-random-label2-all-classes__sbs-500__qs-500__unc-class_power_pe66__seed-12348", + "loop": 4, + "preprocess": true, + "training": true, + "get_performance": true, + "pred_tr": false, + "query": false, + "update_data": false, + "in_progress": false +} \ No newline at end of file