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openbmb
/
SciCore-Omics

Image Feature Extraction
Transformers
Safetensors
English
Chinese
minicpmv
histopathology
multimodal
spatial-transcriptomics
custom_code
Model card Files Files and versions
xet
Community

Instructions to use openbmb/SciCore-Omics with libraries, inference providers, notebooks, and local apps. Follow these links to get started.

  • Libraries
  • Transformers

    How to use openbmb/SciCore-Omics with Transformers:

    # Use a pipeline as a high-level helper
    from transformers import pipeline
    
    pipe = pipeline("image-feature-extraction", model="openbmb/SciCore-Omics", trust_remote_code=True)
    # Load model directly
    from transformers import AutoModel
    model = AutoModel.from_pretrained("openbmb/SciCore-Omics", trust_remote_code=True, dtype="auto")
  • Notebooks
  • Google Colab
  • Kaggle
SciCore-Omics / gene_tokenizer
2.79 MB
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  • 2 contributors
History: 1 commit
DennisHuang648's picture
DennisHuang648
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  • __init__.py
    176 Bytes
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  • config.json
    808 Bytes
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  • configuration_nicheformer.py
    2.01 kB
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  • gitattributes.txt
    1.57 kB
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  • masking.py
    1.96 kB
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  • model-ensembl.h5ad
    1.07 MB
    xet
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  • model-symbel.h5ad
    936 kB
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  • tokenization_nicheformer.py
    16.4 kB
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  • vocab.json
    599 kB
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  • xenium_mean_script.npy
    163 kB
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