Update handler.py

handler.py

@@ -105,9 +105,24 @@ def convert_raw_align_to_tm(align_fn: Path, tm_path: Path):
         logging.debug("[INFO] Conerting raw alignment to TM repo...")
 
     def load_alignment(fn: Path):
-        fn = Path(fn)
-        content = fn.read_text()
-        logging.info(f"Content !!! {content}")
+        try:
+            # Ensure fn is a Path object
+            fn = Path(fn)
+    
+            # Check if the file exists
+            if not fn.exists():
+                logging.error(f"File does not exist: {fn}")
+                return
+    
+            # Read and log the content of the file
+            content = fn.read_text()
+            if content:
+                logging.info(f"Content of {fn.name}: {content[:10]}...")  # Log first 100 characters
+            else:
+                logging.warning(f"File is empty: {fn}")
+    
+        except Exception as e:
+            logging.error(f"Error while reading file {fn}: {e}")
         if not content:
             return []
 
@@ -136,7 +151,6 @@ def convert_raw_align_to_tm(align_fn: Path, tm_path: Path):
         for bo_seg, en_seg in load_alignment(align_fn):
             bo_file.write(bo_seg + "\n")
             en_file.write(en_seg + "\n")
-    logging.info(f"BO !!! {bo_seg}")
     return tm_path