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- genomics
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- bert
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- MLM
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# nano-scGPT
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The simplest, fastest repository for scGPT inference, (soon) finetuning and trianing, with minimal dependencies. It reimplements the original [scGPT](https://github.com/bowang-lab/scGPT) from scratch. `nano_scgpt/model.py` is pure PyTorch in ~270 lines of code, and `nano_scgpt/scGPT_tokenizer.py` turns raw scRNA data into model input. Small enough to read in one sitting and hack on.
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- genomics
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- bert
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- MLM
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- pytorch
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---
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# nano-scGPT
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The simplest, fastest repository for scGPT inference, (soon) finetuning and trianing, with minimal dependencies. It reimplements the original [scGPT](https://github.com/bowang-lab/scGPT) from scratch. `nano_scgpt/model.py` is pure PyTorch in ~270 lines of code, and `nano_scgpt/scGPT_tokenizer.py` turns raw scRNA data into model input. Small enough to read in one sitting and hack on.
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