- Rewrite README into a structured Hugging Face model card with YAML
metadata (license, tags, pipeline_tag), badges, Model Summary/Details,
Intended Use, Limitations, and an FAQ
- Fix usage instructions and directory tree (use model_updated.pt +
tokenizer/; historical split model is under experiment_data/historical_version/)
- Align all figures with the PLOS ONE paper (16.09M sequences / 17.4B nt,
350M params, model dimension 1280, 1024-token context, BPE vocab 1024)
- Add BibTeX / plain-text citation and paper + preprint DOI links
- Add CITATION.cff and .gitignore