| { |
| "popv_version": "0.6.0", |
| "anndata_version": "0.12.2", |
| "scikit_learn_version": "1.7.2", |
| "setup_dict": { |
| "ref_batch_key": "batch_key", |
| "ref_labels_key": "popv_labels", |
| "unknown_celltype_label": "unassigned" |
| }, |
| "prediction_keys": [ |
| "popv_celltypist_prediction", |
| "popv_knn_bbknn_prediction", |
| "popv_knn_harmony_prediction", |
| "popv_knn_on_scvi_prediction", |
| "popv_onclass_prediction", |
| "popv_scanvi_prediction", |
| "popv_svm_prediction", |
| "popv_xgboost_prediction" |
| ], |
| "method_kwargs": {}, |
| "methods": [ |
| "CELLTYPIST", |
| "KNN_BBKNN", |
| "KNN_HARMONY", |
| "KNN_SCVI", |
| "ONCLASS", |
| "SCANVI_POPV", |
| "Support_Vector", |
| "XGboost" |
| ], |
| "cellxgene_url": "https://cellxgene.cziscience.com/e/db55b719-6102-493a-9251-404bc501d0de.cxg/", |
| "organism": "Mus musculus" |
| } |
