canergen's picture
popV version: 0.6.0
b6b33f7 verified
{
"query_accuracy": "| Cell Type | N cells | celltypist | knn bbknn | knn harmony | knn on scvi | onclass | scanvi | svm | xgboost | Consensus Prediction |\n| --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |\n| enterocyte of epithelium of large intestine | 106 | 0.97 | 0.96 | 0.97 | 0.95 | 0.00 | 0.93 | 0.97 | 0.97 | 0.97 |\n| intestinal crypt stem cell | 39 | 0.95 | 0.95 | 0.95 | 0.95 | 0.00 | 0.96 | 0.93 | 0.90 | 0.94 |\n| epithelial cell of large intestine | 23 | 0.90 | 0.84 | 0.82 | 0.76 | 0.00 | 0.75 | 0.84 | 0.83 | 0.84 |\n| large intestine goblet cell | 19 | 0.95 | 0.95 | 0.97 | 1.00 | 0.00 | 0.95 | 0.95 | 1.00 | 0.97 |\n| hematopoietic stem cell | 2 | 1.00 | 1.00 | 1.00 | 1.00 | 0.00 | 1.00 | 1.00 | 0.80 | 1.00 |",
"ref_accuracy": "| Cell Type | N cells | celltypist | knn bbknn | knn harmony | knn on scvi | onclass | scanvi | svm | xgboost | Consensus Prediction |\n| --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |\n| enterocyte of epithelium of large intestine | 1019 | 0.98 | 0.97 | 0.98 | 0.97 | 0.00 | 0.96 | 1.00 | 1.00 | 0.99 |\n| intestinal crypt stem cell | 300 | 0.92 | 0.94 | 0.93 | 0.92 | 0.00 | 0.97 | 1.00 | 1.00 | 0.99 |\n| epithelial cell of large intestine | 206 | 0.84 | 0.84 | 0.86 | 0.76 | 0.00 | 0.84 | 0.99 | 0.99 | 0.96 |\n| large intestine goblet cell | 139 | 0.99 | 0.99 | 0.98 | 0.97 | 0.00 | 0.98 | 1.00 | 1.00 | 1.00 |\n| hematopoietic stem cell | 34 | 0.96 | 0.96 | 0.96 | 0.96 | 0.00 | 0.99 | 1.00 | 0.99 | 0.97 |"
}