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OnClass.data-00000-of-00001

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OnClass.npz

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accuracies.json

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 {
-    "query_accuracy": "| Cell Type | N cells |  celltypist |  knn bbknn |  knn harmony |  knn on scvi |  onclass |  scanvi |  svm |  xgboost | Consensus Prediction |\n| --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |\n| enterocyte of epithelium of large intestine | 107 | 0.98 | 0.96 | 0.96 | 0.92 | 0.00 | 0.93 | 0.96 | 0.96 | 0.97 |\n| intestinal crypt stem cell | 39 | 0.94 | 0.94 | 0.95 | 0.72 | 0.00 | 0.83 | 0.95 | 0.96 | 0.97 |\n| epithelial cell of large intestine | 23 | 0.89 | 0.82 | 0.78 | 0.40 | 0.00 | 0.67 | 0.87 | 0.85 | 0.86 |\n| large intestine goblet cell | 17 | 0.92 | 0.91 | 0.97 | 0.00 | 0.00 | 0.84 | 0.94 | 0.97 | 0.97 |\n| hematopoietic stem cell | 3 | 1.00 | 1.00 | 1.00 | 0.00 | 0.00 | 0.86 | 1.00 | 0.86 | 1.00 |",
-    "ref_accuracy": "| Cell Type | N cells |  celltypist |  knn bbknn |  knn harmony |  knn on scvi |  onclass |  scanvi |  svm |  xgboost | Consensus Prediction |\n| --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |\n| enterocyte of epithelium of large intestine | 1018 | 0.98 | 0.96 | 0.98 | 0.98 | 0.00 | 0.99 | 1.00 | 1.00 | 1.00 |\n| intestinal crypt stem cell | 300 | 0.93 | 0.92 | 0.96 | 0.87 | 0.00 | 0.92 | 1.00 | 1.00 | 0.99 |\n| epithelial cell of large intestine | 206 | 0.88 | 0.76 | 0.89 | 0.75 | 0.00 | 0.85 | 0.99 | 0.99 | 0.96 |\n| large intestine goblet cell | 141 | 0.98 | 0.97 | 1.00 | 0.82 | 0.00 | 0.97 | 1.00 | 1.00 | 1.00 |\n| hematopoietic stem cell | 33 | 0.96 | 0.97 | 0.95 | 0.85 | 0.00 | 0.97 | 1.00 | 1.00 | 1.00 |"
+    "query_accuracy": "| Cell Type | N cells |  celltypist |  knn bbknn |  knn harmony |  knn on scvi |  onclass |  scanvi |  svm |  xgboost | Consensus Prediction |\n| --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |\n| enterocyte of epithelium of large intestine | 105 | 0.97 | 0.96 | 0.97 | 0.97 | 0.00 | 0.94 | 0.96 | 0.95 | 0.97 |\n| intestinal crypt stem cell | 41 | 0.94 | 0.93 | 0.96 | 0.66 | 0.00 | 0.87 | 0.95 | 0.93 | 0.96 |\n| epithelial cell of large intestine | 23 | 0.86 | 0.82 | 0.81 | 0.44 | 0.00 | 0.65 | 0.88 | 0.81 | 0.89 |\n| large intestine goblet cell | 17 | 0.94 | 0.94 | 0.97 | 0.00 | 0.00 | 0.89 | 0.94 | 0.94 | 0.94 |\n| hematopoietic stem cell | 3 | 1.00 | 0.80 | 1.00 | 0.00 | 0.00 | 1.00 | 1.00 | 0.86 | 1.00 |",
+    "ref_accuracy": "| Cell Type | N cells |  celltypist |  knn bbknn |  knn harmony |  knn on scvi |  onclass |  scanvi |  svm |  xgboost | Consensus Prediction |\n| --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |\n| enterocyte of epithelium of large intestine | 1020 | 0.98 | 0.97 | 0.98 | 0.98 | 0.00 | 0.99 | 1.00 | 1.00 | 0.99 |\n| intestinal crypt stem cell | 298 | 0.92 | 0.92 | 0.96 | 0.85 | 0.00 | 0.92 | 1.00 | 1.00 | 0.99 |\n| epithelial cell of large intestine | 206 | 0.86 | 0.77 | 0.89 | 0.74 | 0.00 | 0.88 | 0.98 | 0.98 | 0.96 |\n| large intestine goblet cell | 141 | 0.99 | 0.99 | 1.00 | 0.86 | 0.00 | 0.97 | 1.00 | 1.00 | 1.00 |\n| hematopoietic stem cell | 33 | 0.95 | 0.94 | 0.97 | 0.82 | 0.00 | 0.92 | 1.00 | 1.00 | 1.00 |"
 }

celltypist.pkl

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harmony_knn_classifier.joblib

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preprocessing.json

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