diff --git "a/popv_output/predictions.csv" "b/popv_output/predictions.csv" --- "a/popv_output/predictions.csv" +++ "b/popv_output/predictions.csv" @@ -1,310 +1,311 @@ index,popv_celltypist_prediction,popv_knn_bbknn_prediction,popv_knn_harmony_prediction,popv_knn_on_scvi_prediction,popv_onclass_prediction,popv_scanvi_prediction,popv_svm_prediction,popv_xgboost_prediction,popv_prediction,popv_prediction_score,popv_majority_vote_prediction,popv_majority_vote_score,popv_parent -A12_B000120_B007345_S12.mm10-plus-7-0,T cell,T cell,T cell,T cell,mature T cell,T cell,T cell,T cell,T cell,8,T cell,8,T cell -A2_B000120_B007345_S2.mm10-plus-7-0,basal epithelial cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,basal cell of epithelium of bronchus,ciliated columnar cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,7,basal epithelial cell of tracheobronchial tree,7,basal epithelial cell of tracheobronchial tree -A5_B000120_B007345_S5.mm10-plus-7-0,fibroblast,fibroblast,fibroblast,fibroblast,fibroblast of the conjunctiva,fibroblast,fibroblast,fibroblast,fibroblast,8,fibroblast,8,fibroblast +A13_B000263_B007344_S13.mm10-plus-7-0,fibroblast,fibroblast,fibroblast,fibroblast,fibroblast of the conjunctiva,fibroblast,fibroblast,fibroblast,fibroblast,8,fibroblast,8,fibroblast B17_B000120_B007345_S41.mm10-plus-7-0,fibroblast,fibroblast,fibroblast,fibroblast,fibroblast of the conjunctiva,fibroblast,fibroblast,fibroblast,fibroblast,8,fibroblast,8,fibroblast B19_B000263_B007344_S43.mm10-plus-7-0,T cell,T cell,T cell,T cell,mature T cell,T cell,T cell,T cell,T cell,8,T cell,8,T cell -C13_B000263_B007344_S61.mm10-plus-7-0,fibroblast,fibroblast,fibroblast,fibroblast,fibroblast of the conjunctiva,fibroblast,fibroblast,fibroblast,fibroblast,8,fibroblast,8,fibroblast -C14_B000120_B007345_S62.mm10-plus-7-0,macrophage,basal epithelial cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,basal cell of epithelium of bronchus,macrophage,basal epithelial cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,6,basal epithelial cell of tracheobronchial tree,6,basal epithelial cell of tracheobronchial tree +C14_B000120_B007345_S62.mm10-plus-7-0,basal epithelial cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,basal cell of epithelium of bronchus,basal epithelial cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,8,basal epithelial cell of tracheobronchial tree,8,basal epithelial cell of tracheobronchial tree +C18_B000120_B007345_S66.mm10-plus-7-0,granulocyte,granulocyte,granulocyte,granulocyte,myeloid leukocyte,granulocyte,granulocyte,granulocyte,granulocyte,7,granulocyte,8,granulocyte C19_B000263_B007344_S67.mm10-plus-7-0,basal epithelial cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,basal cell of epithelium of bronchus,basal epithelial cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,8,basal epithelial cell of tracheobronchial tree,8,basal epithelial cell of tracheobronchial tree -C21_B000120_B007345_S69.mm10-plus-7-0,fibroblast,fibroblast,fibroblast,fibroblast,fibroblast of the conjunctiva,fibroblast,fibroblast,fibroblast,fibroblast,8,fibroblast,8,fibroblast +C2_B000120_B007345_S50.mm10-plus-7-0,macrophage,macrophage,macrophage,macrophage,tissue-resident macrophage,macrophage,macrophage,macrophage,macrophage,8,macrophage,8,macrophage C3_B000120_B007345_S51.mm10-plus-7-0,fibroblast,fibroblast,fibroblast,fibroblast,fibroblast of the conjunctiva,fibroblast,fibroblast,fibroblast,fibroblast,8,fibroblast,8,fibroblast -D2_B000263_B007344_S74.mm10-plus-7-0,granulocyte,granulocyte,granulocyte,T cell,myeloid leukocyte,granulocyte,granulocyte,granulocyte,granulocyte,6,granulocyte,7,granulocyte -D5_B000263_B007344_S77.mm10-plus-7-0,basal epithelial cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,basal cell of epithelium of bronchus,basal epithelial cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,8,basal epithelial cell of tracheobronchial tree,8,basal epithelial cell of tracheobronchial tree -E21_B000120_B007345_S117.mm10-plus-7-0,macrophage,macrophage,macrophage,macrophage,tissue-resident macrophage,granulocyte,macrophage,macrophage,macrophage,7,macrophage,7,macrophage +D16_B000120_B007345_S88.mm10-plus-7-0,macrophage,macrophage,macrophage,macrophage,tissue-resident macrophage,macrophage,macrophage,macrophage,macrophage,8,macrophage,8,macrophage +D19_B000120_B007345_S91.mm10-plus-7-0,fibroblast,fibroblast,fibroblast,fibroblast,fibroblast of the conjunctiva,fibroblast,fibroblast,fibroblast,fibroblast,8,fibroblast,8,fibroblast E4_B000120_B007345_S100.mm10-plus-7-0,fibroblast,fibroblast,fibroblast,fibroblast,fibroblast of the conjunctiva,fibroblast,fibroblast,fibroblast,fibroblast,8,fibroblast,8,fibroblast -E8_B000120_B007345_S104.mm10-plus-7-0,fibroblast,fibroblast,fibroblast,fibroblast,fibroblast of the conjunctiva,fibroblast,fibroblast,fibroblast,fibroblast,8,fibroblast,8,fibroblast -F14_B000263_B007344_S134.mm10-plus-7-0,chondrocyte,chondrocyte,chondrocyte,fibroblast,articular chondrocyte,fibroblast,chondrocyte,chondrocyte,chondrocyte,6,chondrocyte,6,collagen secreting cell +F14_B000263_B007344_S134.mm10-plus-7-0,chondrocyte,chondrocyte,chondrocyte,chondrocyte,articular chondrocyte,chondrocyte,chondrocyte,chondrocyte,chondrocyte,8,chondrocyte,8,collagen secreting cell +F19_B000120_B007345_S139.mm10-plus-7-0,endothelial cell,endothelial cell,endothelial cell,endothelial cell,endothelial cell of uterus,endothelial cell,endothelial cell,endothelial cell,endothelial cell,8,endothelial cell,8,endothelial cell F3_B000263_B007344_S123.mm10-plus-7-0,basal epithelial cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,basal cell of epithelium of bronchus,basal epithelial cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,8,basal epithelial cell of tracheobronchial tree,8,basal epithelial cell of tracheobronchial tree +F5_B000263_B007344_S125.mm10-plus-7-0,endothelial cell,endothelial cell,endothelial cell,endothelial cell,endothelial cell of uterus,endothelial cell,endothelial cell,endothelial cell,endothelial cell,8,endothelial cell,8,endothelial cell +F9_B000263_B007344_S129.mm10-plus-7-0,fibroblast,fibroblast,fibroblast,fibroblast,fibroblast of the conjunctiva,fibroblast,fibroblast,fibroblast,fibroblast,8,fibroblast,8,fibroblast G21_B000263_B007344_S165.mm10-plus-7-0,basal epithelial cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,basal cell of epithelium of bronchus,basal epithelial cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,8,basal epithelial cell of tracheobronchial tree,8,basal epithelial cell of tracheobronchial tree +G9_B000120_B007345_S153.mm10-plus-7-0,fibroblast,fibroblast,fibroblast,fibroblast,fibroblast of the conjunctiva,fibroblast,fibroblast,fibroblast,fibroblast,8,fibroblast,8,fibroblast +H14_B000263_B007344_S182.mm10-plus-7-0,basal epithelial cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,basal cell of epithelium of bronchus,basal epithelial cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,8,basal epithelial cell of tracheobronchial tree,8,basal epithelial cell of tracheobronchial tree +H16_B000120_B007345_S184.mm10-plus-7-0,fibroblast,fibroblast,fibroblast,fibroblast,fibroblast of the conjunctiva,fibroblast,fibroblast,fibroblast,fibroblast,8,fibroblast,8,fibroblast H4_B000120_B007345_S172.mm10-plus-7-0,smooth muscle cell of trachea,smooth muscle cell of trachea,smooth muscle cell of trachea,smooth muscle cell of trachea,tracheobronchial smooth muscle cell,smooth muscle cell of trachea,smooth muscle cell of trachea,smooth muscle cell of trachea,smooth muscle cell of trachea,7,smooth muscle cell of trachea,8,smooth muscle cell of trachea -I10_B000120_B007345_S202.mm10-plus-7-0,fibroblast,fibroblast,fibroblast,chondrocyte,fibroblast of the conjunctiva,fibroblast,fibroblast,fibroblast,fibroblast,7,fibroblast,7,fibroblast -I12_B000263_B007344_S204.mm10-plus-7-0,macrophage,macrophage,macrophage,macrophage,tissue-resident macrophage,granulocyte,macrophage,macrophage,macrophage,7,macrophage,7,macrophage -I19_B000120_B007345_S211.mm10-plus-7-0,fibroblast,fibroblast,fibroblast,fibroblast,fibroblast of the conjunctiva,fibroblast,fibroblast,fibroblast,fibroblast,8,fibroblast,8,fibroblast -I22_B000263_B007344_S214.mm10-plus-7-0,macrophage,macrophage,macrophage,macrophage,tissue-resident macrophage,granulocyte,macrophage,macrophage,macrophage,7,macrophage,7,macrophage -I7_B000120_B007345_S199.mm10-plus-7-0,T cell,T cell,T cell,T cell,mature T cell,T cell,T cell,T cell,T cell,8,T cell,8,T cell -J4_B000263_B007344_S220.mm10-plus-7-0,fibroblast,fibroblast,fibroblast,fibroblast,fibroblast of the conjunctiva,fibroblast,fibroblast,fibroblast,fibroblast,8,fibroblast,8,fibroblast -K19_B000120_B007345_S259.mm10-plus-7-0,fibroblast,fibroblast,fibroblast,fibroblast,fibroblast of the conjunctiva,fibroblast,fibroblast,fibroblast,fibroblast,8,fibroblast,8,fibroblast -K1_B000120_B007345_S241.mm10-plus-7-0,basal epithelial cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,basal 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conjunctiva,fibroblast,fibroblast,fibroblast,fibroblast,7,fibroblast,7,fibroblast K5_B000263_B007344_S245.mm10-plus-7-0,macrophage,macrophage,macrophage,macrophage,tissue-resident macrophage,macrophage,macrophage,macrophage,macrophage,8,macrophage,8,macrophage K6_B000263_B007344_S246.mm10-plus-7-0,fibroblast,fibroblast,fibroblast,fibroblast,fibroblast of the conjunctiva,fibroblast,fibroblast,fibroblast,fibroblast,8,fibroblast,8,fibroblast +L11_B000120_B007345_S275.mm10-plus-7-0,fibroblast,fibroblast,fibroblast,fibroblast,fibroblast of the conjunctiva,fibroblast,fibroblast,fibroblast,fibroblast,8,fibroblast,8,fibroblast L14_B000263_B007344_S278.mm10-plus-7-0,fibroblast,fibroblast,fibroblast,fibroblast,fibroblast of the conjunctiva,fibroblast,fibroblast,fibroblast,fibroblast,8,fibroblast,8,fibroblast -M16_B000120_B007345_S304.mm10-plus-7-0,macrophage,macrophage,macrophage,macrophage,tissue-resident macrophage,granulocyte,macrophage,macrophage,macrophage,7,macrophage,7,macrophage -M18_B000120_B007345_S306.mm10-plus-7-0,fibroblast,fibroblast,fibroblast,fibroblast,fibroblast of the conjunctiva,fibroblast,fibroblast,fibroblast,fibroblast,8,fibroblast,8,fibroblast +L16_B000263_B007344_S280.mm10-plus-7-0,basal epithelial cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,basal cell of epithelium of bronchus,basal epithelial cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,8,basal epithelial cell of tracheobronchial tree,8,basal epithelial cell of tracheobronchial tree +L22_B000120_B007345_S286.mm10-plus-7-0,fibroblast,fibroblast,fibroblast,fibroblast,tracheobronchial smooth muscle cell,fibroblast,fibroblast,fibroblast,fibroblast,7,fibroblast,8,fibroblast +M16_B000120_B007345_S304.mm10-plus-7-0,macrophage,macrophage,macrophage,macrophage,tissue-resident macrophage,macrophage,macrophage,macrophage,macrophage,8,macrophage,8,macrophage +M16_B000263_B007344_S304.mm10-plus-7-0,basal epithelial cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,basal cell of epithelium of bronchus,basal epithelial cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,8,basal epithelial cell of tracheobronchial tree,8,basal epithelial cell of tracheobronchial tree +N11_B000120_B007345_S323.mm10-plus-7-0,T cell,T cell,T cell,T cell,mature T cell,T cell,T cell,T cell,T cell,8,T cell,8,T cell N16_B000263_B007344_S328.mm10-plus-7-0,fibroblast,fibroblast,fibroblast,fibroblast,fibroblast of the 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+P18_B000120_B007345_S378.mm10-plus-7-0,macrophage,macrophage,macrophage,macrophage,tissue-resident macrophage,macrophage,macrophage,macrophage,macrophage,8,macrophage,8,macrophage +P21_B000263_B007344_S381.mm10-plus-7-0,basal epithelial cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,keratinocyte,epithelial cell of tracheobronchial tree,keratinocyte,basal epithelial cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,5,basal epithelial cell of tracheobronchial tree,6,epithelial cell of tracheobronchial tree A6_B000750_B007346_S6.mm10-plus-8-0,T cell,T cell,T cell,T cell,mature T cell,T cell,T cell,T cell,T cell,8,T cell,8,T cell +B18_B000750_B007346_S42.mm10-plus-8-0,smooth muscle cell of trachea,smooth muscle cell of trachea,smooth muscle cell of trachea,smooth muscle cell of trachea,tracheobronchial smooth muscle cell,smooth muscle cell 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cell,T cell,8,T cell,8,T cell -D13_B000750_B007346_S85.mm10-plus-8-0,T cell,T cell,T cell,T cell,mature T cell,T cell,T cell,T cell,T cell,8,T cell,8,T cell +D18_B000750_B007346_S90.mm10-plus-8-0,fibroblast,fibroblast,fibroblast,fibroblast,fibroblast of the conjunctiva,fibroblast,fibroblast,fibroblast,fibroblast,8,fibroblast,8,fibroblast E20_B000750_B007346_S116.mm10-plus-8-0,macrophage,macrophage,macrophage,macrophage,tissue-resident macrophage,macrophage,macrophage,macrophage,macrophage,8,macrophage,8,macrophage -F17_B000750_B007346_S137.mm10-plus-8-0,basal epithelial cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,basal cell of epithelium of bronchus,ciliated columnar cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,7,basal epithelial cell of 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tracheobronchial tree,basal epithelial cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,8,basal epithelial cell of tracheobronchial tree,8,basal epithelial cell of tracheobronchial tree +K7_B002990_S247_L003.mus-6-0-1,basal epithelial cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,smooth muscle cell of trachea,tracheobronchial smooth muscle cell,smooth muscle cell of trachea,basal epithelial cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,basal epithelial cell of tracheobronchial tree,5,basal epithelial cell of tracheobronchial tree,6,eukaryotic cell +L15_B002990_S279_L003.mus-6-0-1,macrophage,macrophage,macrophage,macrophage,tissue-resident macrophage,macrophage,macrophage,macrophage,macrophage,8,macrophage,8,macrophage M10_B002990_S298_L003.mus-6-0-1,T cell,T cell,T cell,T cell,mature T cell,T cell,T cell,T cell,T cell,8,T cell,8,T cell -M16_B002990_S304_L003.mus-6-0-1,endothelial cell,endothelial cell,endothelial cell,endothelial cell,endothelial cell of uterus,endothelial cell,endothelial cell,endothelial cell,endothelial cell,8,endothelial cell,8,endothelial cell -M19_B002990_S307_L003.mus-6-0-1,endothelial cell,endothelial cell,endothelial cell,endothelial cell,endothelial cell of uterus,endothelial cell,endothelial cell,endothelial cell,endothelial cell,8,endothelial cell,8,endothelial cell N11_B002990_S323_L003.mus-6-0-1,fibroblast,fibroblast,fibroblast,fibroblast,fibroblast of the conjunctiva,fibroblast,fibroblast,fibroblast,fibroblast,8,fibroblast,8,fibroblast -O5_B002990_S341_L003.mus-6-0-1,fibroblast,fibroblast,fibroblast,fibroblast,fibroblast of the conjunctiva,fibroblast,fibroblast,fibroblast,fibroblast,8,fibroblast,8,fibroblast +N14_B002990_S326_L003.mus-6-0-1,fibroblast,fibroblast,fibroblast,fibroblast,fibroblast of the conjunctiva,fibroblast,fibroblast,fibroblast,fibroblast,8,fibroblast,8,fibroblast +N1_B002990_S313_L003.mus-6-0-1,T cell,T cell,T cell,T cell,mature T cell,T cell,T cell,T cell,T cell,8,T cell,8,T cell +N3_B002990_S315_L003.mus-6-0-1,macrophage,macrophage,macrophage,macrophage,tissue-resident macrophage,macrophage,macrophage,macrophage,macrophage,8,macrophage,8,macrophage +O10_B002990_S346_L003.mus-6-0-1,ciliated columnar cell of tracheobronchial tree,ciliated columnar cell of tracheobronchial tree,ciliated columnar cell of tracheobronchial tree,ciliated columnar cell of tracheobronchial tree,tracheobronchial smooth muscle cell,ciliated columnar cell of tracheobronchial tree,ciliated columnar cell of tracheobronchial tree,ciliated columnar cell of tracheobronchial tree,ciliated columnar cell of tracheobronchial tree,7,ciliated columnar cell of tracheobronchial tree,8,epithelial cell of tracheobronchial tree +O11_B002990_S347_L003.mus-6-0-1,fibroblast,fibroblast,fibroblast,fibroblast,fibroblast of the conjunctiva,fibroblast,fibroblast,fibroblast,fibroblast,8,fibroblast,8,fibroblast +O20_B002990_S356_L003.mus-6-0-1,fibroblast,fibroblast,fibroblast,fibroblast,fibroblast of the conjunctiva,fibroblast,fibroblast,fibroblast,fibroblast,8,fibroblast,8,fibroblast O9_B002990_S345_L003.mus-6-0-1,fibroblast,fibroblast,fibroblast,fibroblast,fibroblast of the conjunctiva,fibroblast,fibroblast,fibroblast,fibroblast,8,fibroblast,8,fibroblast -P20_B002990_S380_L003.mus-6-0-1,endothelial cell,endothelial cell,endothelial cell,endothelial cell,endothelial cell of uterus,endothelial cell,endothelial cell,endothelial cell,endothelial cell,8,endothelial cell,8,endothelial cell P8_B002990_S368_L003.mus-6-0-1,fibroblast,fibroblast,fibroblast,fibroblast,fibroblast of the conjunctiva,fibroblast,fibroblast,fibroblast,fibroblast,8,fibroblast,8,fibroblast -A1.MAA000496.3_10_M.1.1-1-1,chondrocyte,chondrocyte,chondrocyte,chondrocyte,articular 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chondrocyte,chondrocyte,chondrocyte,chondrocyte,chondrocyte,8,chondrocyte,8,collagen secreting cell A14.D042474.3_8_M.1.1-1-1,fibroblast,fibroblast,fibroblast,fibroblast,fibroblast of the conjunctiva,fibroblast,fibroblast,fibroblast,fibroblast,8,fibroblast,8,fibroblast -A16.MAA001865.3_38_F.1.1-1-1,macrophage,macrophage,macrophage,macrophage,tissue-resident macrophage,macrophage,macrophage,macrophage,macrophage,8,macrophage,8,macrophage -A5.MAA001865.3_38_F.1.1-1-1,fibroblast,fibroblast,fibroblast,fibroblast,fibroblast of the conjunctiva,fibroblast,fibroblast,fibroblast,fibroblast,8,fibroblast,8,fibroblast -A6.D042474.3_8_M.1.1-1-1,chondrocyte,chondrocyte,chondrocyte,chondrocyte,articular chondrocyte,chondrocyte,chondrocyte,chondrocyte,chondrocyte,8,chondrocyte,8,collagen secreting cell -A8.MAA001867.3_39_F.1.1-1-1,fibroblast,fibroblast,fibroblast,fibroblast,articular chondrocyte,fibroblast,chondrocyte,fibroblast,fibroblast,6,fibroblast,6,fibroblast 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