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@@ -33,3 +33,4 @@ saved_model/**/* filter=lfs diff=lfs merge=lfs -text
 *.zip filter=lfs diff=lfs merge=lfs -text
 *.zst filter=lfs diff=lfs merge=lfs -text
 *tfevents* filter=lfs diff=lfs merge=lfs -text
+OnClass.data-00000-of-00001 filter=lfs diff=lfs merge=lfs -text

OnClass.data-00000-of-00001

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OnClass.npz

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accuracies.json

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+{
+    "query_accuracy": "| Cell Type | N cells |  celltypist |  knn bbknn |  knn harmony |  knn on scvi |  onclass |  scanvi |  svm |  xgboost | Consensus Prediction |\n| --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |\n| kidney epithelial cell | 924 | 1.00 | 0.99 | 1.00 | 1.00 | 0.00 | 0.97 | 1.00 | 1.00 | 1.00 |\n| CD8-positive, alpha-beta T cell | 52 | 0.88 | 0.88 | 0.88 | 0.71 | 0.00 | 0.89 | 0.91 | 0.91 | 0.93 |\n| B cell | 51 | 0.97 | 0.79 | 0.97 | 0.97 | 0.00 | 0.97 | 0.94 | 0.97 | 0.96 |\n| macrophage | 40 | 0.85 | 0.67 | 0.85 | 0.77 | 0.00 | 0.72 | 0.74 | 0.79 | 0.84 |\n| CD4-positive, alpha-beta T cell | 25 | 0.78 | 0.89 | 0.86 | 0.54 | 0.00 | 0.74 | 0.83 | 0.86 | 0.91 |\n| natural killer cell | 22 | 0.95 | 0.93 | 0.93 | 0.73 | 0.00 | 0.88 | 0.95 | 0.96 | 0.95 |\n| endothelial cell | 14 | 0.93 | 0.60 | 0.92 | 0.88 | 0.00 | 0.40 | 0.89 | 0.86 | 0.92 |\n| monocyte | 5 | 0.00 | 0.00 | 0.50 | 0.00 | 0.00 | 0.38 | 0.40 | 0.22 | 0.29 |\n| non-classical monocyte | 1 | 0.00 | 0.00 | 0.50 | 0.00 | 0.00 | 0.40 | 0.00 | 0.00 | 0.00 |\n| neutrophil | 2 | 1.00 | 0.00 | 1.00 | 0.00 | 0.00 | 0.67 | 0.67 | 0.67 | 0.67 |\n| T cell | 2 | 0.00 | 0.00 | 0.67 | 0.40 | 0.00 | 0.00 | 0.00 | 0.67 | 0.00 |\n| plasma cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| intermediate monocyte | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |",
+    "ref_accuracy": "| Cell Type | N cells |  celltypist |  knn bbknn |  knn harmony |  knn on scvi |  onclass |  scanvi |  svm |  xgboost | Consensus Prediction |\n| --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |\n| kidney epithelial cell | 8354 | 1.00 | 0.99 | 1.00 | 1.00 | 0.00 | 0.98 | 1.00 | 1.00 | 1.00 |\n| CD8-positive, alpha-beta T cell | 485 | 0.82 | 0.81 | 0.90 | 0.79 | 0.00 | 0.92 | 1.00 | 1.00 | 0.96 |\n| B cell | 443 | 0.97 | 0.78 | 0.98 | 0.98 | 0.00 | 0.99 | 1.00 | 1.00 | 1.00 |\n| macrophage | 299 | 0.79 | 0.56 | 0.88 | 0.85 | 0.00 | 0.87 | 0.99 | 0.96 | 0.96 |\n| CD4-positive, alpha-beta T cell | 274 | 0.73 | 0.81 | 0.87 | 0.76 | 0.00 | 0.86 | 1.00 | 1.00 | 0.93 |\n| natural killer cell | 179 | 0.91 | 0.92 | 0.94 | 0.75 | 0.00 | 0.91 | 1.00 | 1.00 | 0.99 |\n| endothelial cell | 87 | 0.91 | 0.00 | 0.97 | 0.90 | 0.00 | 0.32 | 0.86 | 0.86 | 0.94 |\n| monocyte | 49 | 0.00 | 0.00 | 0.59 | 0.49 | 0.00 | 0.85 | 1.00 | 1.00 | 0.85 |\n| non-classical monocyte | 26 | 0.00 | 0.00 | 0.86 | 0.00 | 0.00 | 0.89 | 1.00 | 1.00 | 0.98 |\n| neutrophil | 20 | 1.00 | 0.00 | 0.95 | 0.63 | 0.00 | 0.91 | 1.00 | 1.00 | 1.00 |\n| T cell | 15 | 0.00 | 0.00 | 0.20 | 0.22 | 0.00 | 0.75 | 1.00 | 1.00 | 0.85 |\n| plasma cell | 5 | 0.00 | 0.00 | 0.75 | 0.75 | 0.00 | 0.80 | 1.00 | 1.00 | 1.00 |\n| intermediate monocyte | 2 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.67 | 1.00 | 1.00 | 0.00 |"
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checkpoint

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scanvi/model.pt

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scvi/model.pt

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svm_classifier_cuml.joblib

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xgboost_classifier.model

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