| { | |
| "query_accuracy": "| Cell Type | N cells | celltypist | knn bbknn | knn harmony | knn on scvi | onclass | scanvi | svm | xgboost | Consensus Prediction |\n| --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |\n| enterocyte of epithelium of large intestine | 469 | 0.92 | 0.92 | 0.91 | 0.85 | 0.00 | 0.85 | 0.90 | 0.92 | 0.94 |\n| CD4-positive, alpha-beta T cell | 411 | 0.84 | 0.88 | 0.88 | 0.83 | 0.00 | 0.78 | 0.85 | 0.87 | 0.90 |\n| plasma cell | 314 | 0.99 | 0.98 | 0.97 | 0.96 | 0.00 | 0.96 | 0.98 | 0.99 | 0.99 |\n| CD8-positive, alpha-beta T cell | 288 | 0.77 | 0.85 | 0.84 | 0.68 | 0.00 | 0.75 | 0.80 | 0.82 | 0.85 |\n| fibroblast | 251 | 0.96 | 0.98 | 0.97 | 0.97 | 0.00 | 0.96 | 0.98 | 0.98 | 0.98 |\n| B cell | 222 | 0.98 | 0.99 | 0.98 | 0.97 | 0.00 | 0.98 | 0.98 | 0.98 | 0.99 |\n| gamma-delta T cell | 194 | 0.88 | 0.92 | 0.91 | 0.75 | 0.00 | 0.83 | 0.89 | 0.89 | 0.92 |\n| intestinal crypt stem cell of colon | 158 | 0.83 | 0.82 | 0.85 | 0.79 | 0.00 | 0.81 | 0.81 | 0.87 | 0.88 |\n| large intestine goblet cell | 169 | 0.90 | 0.94 | 0.94 | 0.88 | 0.00 | 0.90 | 0.92 | 0.91 | 0.92 |\n| BEST4+ enteroycte | 122 | 0.88 | 0.89 | 0.93 | 0.80 | 0.00 | 0.85 | 0.91 | 0.92 | 0.92 |\n| enteroglial cell | 76 | 0.99 | 0.99 | 0.98 | 0.95 | 0.00 | 0.98 | 0.99 | 0.99 | 0.99 |\n| regulatory T cell | 64 | 0.66 | 0.63 | 0.67 | 0.44 | 0.00 | 0.56 | 0.64 | 0.68 | 0.72 |\n| mast cell | 48 | 0.98 | 0.98 | 0.98 | 0.98 | 0.00 | 0.98 | 0.98 | 0.96 | 0.98 |\n| myeloid leukocyte | 30 | 0.86 | 0.88 | 0.93 | 0.92 | 0.00 | 0.88 | 0.91 | 0.97 | 0.95 |\n| colon endothelial cell | 39 | 0.96 | 0.95 | 0.99 | 0.94 | 0.00 | 0.93 | 0.99 | 0.97 | 1.00 |\n| colon macrophage | 38 | 0.83 | 0.83 | 0.87 | 0.88 | 0.00 | 0.83 | 0.90 | 0.89 | 0.92 |\n| transit amplifying cell of colon | 22 | 0.73 | 0.57 | 0.67 | 0.38 | 0.00 | 0.58 | 0.68 | 0.71 | 0.72 |\n| naive thymus-derived CD4-positive, alpha-beta T cell | 25 | 0.77 | 0.63 | 0.74 | 0.49 | 0.00 | 0.66 | 0.62 | 0.75 | 0.79 |\n| paneth cell of colon | 22 | 0.54 | 0.41 | 0.60 | 0.65 | 0.00 | 0.67 | 0.77 | 0.84 | 0.82 |\n| tuft cell of colon | 15 | 1.00 | 0.97 | 1.00 | 0.90 | 0.00 | 0.88 | 1.00 | 1.00 | 1.00 |\n| myofibroblast cell | 12 | 0.80 | 0.92 | 0.96 | 1.00 | 0.00 | 0.89 | 0.96 | 0.88 | 0.92 |\n| monocyte | 3 | 0.80 | 0.80 | 0.57 | 0.67 | 0.00 | 0.67 | 0.80 | 0.67 | 0.80 |\n| mature NK T cell | 4 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.67 | 0.60 | 0.50 | 0.00 |\n| type L enteroendocrine cell | 4 | 0.62 | 0.80 | 0.67 | 0.75 | 0.00 | 0.67 | 0.89 | 0.89 | 0.89 |\n| myeloid dendritic cell | 2 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.29 | 0.50 | 0.00 | 0.00 |\n| enterochromaffin-like cell | 4 | 0.00 | 0.86 | 0.00 | 0.33 | 0.00 | 0.86 | 1.00 | 1.00 | 1.00 |\n| natural killer cell | 1 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.20 | 0.00 | 0.00 | 0.00 |\n| innate lymphoid cell | 2 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.29 | 0.00 | 0.50 | 0.00 |\n| neutrophil | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |", | |
| "ref_accuracy": "| Cell Type | N cells | celltypist | knn bbknn | knn harmony | knn on scvi | onclass | scanvi | svm | xgboost | Consensus Prediction |\n| --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |\n| enterocyte of epithelium of large intestine | 4098 | 0.93 | 0.93 | 0.93 | 0.89 | 0.00 | 0.87 | 0.93 | 0.95 | 0.96 |\n| CD4-positive, alpha-beta T cell | 3829 | 0.85 | 0.89 | 0.90 | 0.85 | 0.00 | 0.83 | 0.87 | 0.90 | 0.91 |\n| plasma cell | 2994 | 0.98 | 0.98 | 0.98 | 0.96 | 0.00 | 0.97 | 0.99 | 0.99 | 0.99 |\n| CD8-positive, alpha-beta T cell | 2674 | 0.79 | 0.86 | 0.85 | 0.74 | 0.00 | 0.81 | 0.84 | 0.87 | 0.87 |\n| fibroblast | 2346 | 0.98 | 0.98 | 0.98 | 0.97 | 0.00 | 0.97 | 0.99 | 0.99 | 0.98 |\n| B cell | 1847 | 0.98 | 0.99 | 0.99 | 0.97 | 0.00 | 0.98 | 0.99 | 0.99 | 0.99 |\n| gamma-delta T cell | 1662 | 0.90 | 0.93 | 0.93 | 0.79 | 0.00 | 0.87 | 0.92 | 0.93 | 0.94 |\n| intestinal crypt stem cell of colon | 1574 | 0.84 | 0.86 | 0.89 | 0.86 | 0.00 | 0.82 | 0.90 | 0.92 | 0.93 |\n| large intestine goblet cell | 1388 | 0.93 | 0.94 | 0.95 | 0.91 | 0.00 | 0.93 | 0.95 | 0.96 | 0.96 |\n| BEST4+ enteroycte | 968 | 0.88 | 0.92 | 0.94 | 0.84 | 0.00 | 0.87 | 0.94 | 0.94 | 0.94 |\n| enteroglial cell | 772 | 0.99 | 0.98 | 0.98 | 0.97 | 0.00 | 0.98 | 0.99 | 0.99 | 0.99 |\n| regulatory T cell | 569 | 0.73 | 0.74 | 0.77 | 0.53 | 0.00 | 0.67 | 0.80 | 0.83 | 0.89 |\n| mast cell | 345 | 0.97 | 0.97 | 0.98 | 0.96 | 0.00 | 0.97 | 0.99 | 0.98 | 0.99 |\n| myeloid leukocyte | 324 | 0.87 | 0.91 | 0.91 | 0.93 | 0.00 | 0.96 | 1.00 | 1.00 | 0.98 |\n| colon endothelial cell | 309 | 0.90 | 0.88 | 0.91 | 0.90 | 0.00 | 0.91 | 0.97 | 0.96 | 0.93 |\n| colon macrophage | 290 | 0.81 | 0.86 | 0.86 | 0.88 | 0.00 | 0.95 | 1.00 | 0.99 | 0.94 |\n| transit amplifying cell of colon | 215 | 0.72 | 0.69 | 0.72 | 0.53 | 0.00 | 0.60 | 0.85 | 0.82 | 0.83 |\n| naive thymus-derived CD4-positive, alpha-beta T cell | 203 | 0.71 | 0.68 | 0.73 | 0.42 | 0.00 | 0.66 | 0.84 | 0.85 | 0.83 |\n| paneth cell of colon | 195 | 0.61 | 0.35 | 0.74 | 0.72 | 0.00 | 0.74 | 0.90 | 0.94 | 0.91 |\n| tuft cell of colon | 163 | 0.93 | 0.95 | 0.93 | 0.93 | 0.00 | 0.95 | 0.96 | 0.96 | 0.96 |\n| myofibroblast cell | 70 | 0.83 | 0.81 | 0.85 | 0.88 | 0.00 | 0.88 | 1.00 | 0.99 | 0.92 |\n| monocyte | 63 | 0.77 | 0.79 | 0.74 | 0.73 | 0.00 | 0.93 | 0.98 | 0.99 | 0.91 |\n| mature NK T cell | 43 | 0.00 | 0.49 | 0.24 | 0.33 | 0.00 | 0.85 | 0.97 | 0.99 | 0.75 |\n| type L enteroendocrine cell | 40 | 0.76 | 0.84 | 0.87 | 0.68 | 0.00 | 0.78 | 1.00 | 0.99 | 0.95 |\n| myeloid dendritic cell | 38 | 0.00 | 0.15 | 0.26 | 0.26 | 0.00 | 0.82 | 1.00 | 1.00 | 0.57 |\n| enterochromaffin-like cell | 23 | 0.00 | 0.63 | 0.77 | 0.65 | 0.00 | 0.74 | 0.96 | 0.98 | 0.93 |\n| natural killer cell | 13 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.49 | 0.96 | 0.93 | 1.00 |\n| innate lymphoid cell | 11 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.76 | 1.00 | 1.00 | 0.43 |\n| neutrophil | 9 | 0.00 | 0.00 | 0.00 | 0.20 | 0.00 | 0.90 | 1.00 | 0.95 | 0.94 |" | |
| } |