| { | |
| "query_accuracy": "| Cell Type | N cells | celltypist | knn bbknn | knn harmony | knn on scvi | onclass | scanvi | svm | xgboost | Consensus Prediction |\n| --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |\n| B cell | 1667 | 0.99 | 0.99 | 0.99 | 0.99 | 0.00 | 0.98 | 0.99 | 0.99 | 1.00 |\n| neutrophil | 1506 | 0.99 | 0.99 | 0.99 | 0.99 | 0.00 | 0.99 | 0.99 | 0.99 | 0.99 |\n| CD8-positive, alpha-beta T cell | 1082 | 0.85 | 0.92 | 0.93 | 0.91 | 0.00 | 0.81 | 0.78 | 0.83 | 0.90 |\n| classical monocyte | 469 | 0.82 | 0.87 | 0.86 | 0.85 | 0.00 | 0.79 | 0.78 | 0.84 | 0.87 |\n| plasma cell | 387 | 0.98 | 0.99 | 0.99 | 0.99 | 0.00 | 0.99 | 0.99 | 0.99 | 1.00 |\n| natural killer cell | 387 | 0.93 | 0.95 | 0.95 | 0.95 | 0.00 | 0.95 | 0.92 | 0.93 | 0.94 |\n| monocyte | 324 | 0.69 | 0.75 | 0.76 | 0.75 | 0.00 | 0.69 | 0.57 | 0.71 | 0.77 |\n| macrophage | 301 | 0.90 | 0.93 | 0.93 | 0.93 | 0.00 | 0.90 | 0.91 | 0.93 | 0.93 |\n| CD4-positive, alpha-beta T cell | 232 | 0.46 | 0.56 | 0.57 | 0.47 | 0.00 | 0.38 | 0.40 | 0.52 | 0.58 |\n| naive thymus-derived CD4-positive, alpha-beta T cell | 221 | 0.70 | 0.65 | 0.74 | 0.66 | 0.00 | 0.69 | 0.65 | 0.73 | 0.77 |\n| endothelial cell | 136 | 0.97 | 0.97 | 0.97 | 0.96 | 0.00 | 0.96 | 0.97 | 0.97 | 0.98 |\n| mature NK T cell | 106 | 0.75 | 0.78 | 0.80 | 0.78 | 0.00 | 0.75 | 0.64 | 0.74 | 0.79 |\n| naive thymus-derived CD8-positive, alpha-beta T cell | 67 | 0.49 | 0.32 | 0.66 | 0.53 | 0.00 | 0.54 | 0.43 | 0.49 | 0.59 |\n| erythrocyte | 43 | 0.94 | 0.97 | 0.98 | 0.99 | 0.00 | 0.95 | 0.95 | 0.87 | 0.98 |\n| intermediate monocyte | 33 | 0.27 | 0.00 | 0.10 | 0.05 | 0.00 | 0.25 | 0.17 | 0.30 | 0.33 |\n| regulatory T cell | 28 | 0.46 | 0.42 | 0.57 | 0.38 | 0.00 | 0.39 | 0.52 | 0.51 | 0.64 |\n| innate lymphoid cell | 13 | 0.67 | 0.80 | 0.75 | 0.90 | 0.00 | 0.72 | 0.70 | 0.68 | 0.74 |\n| T cell | 17 | 0.79 | 0.79 | 0.80 | 0.80 | 0.00 | 0.52 | 0.63 | 0.63 | 0.83 |\n| non-classical monocyte | 13 | 0.00 | 0.14 | 0.27 | 0.00 | 0.00 | 0.25 | 0.47 | 0.58 | 0.38 |\n| hematopoietic precursor cell | 6 | 0.43 | 0.73 | 0.55 | 0.73 | 0.00 | 0.77 | 0.77 | 0.67 | 0.83 |\n| platelet | 6 | 0.55 | 0.44 | 0.36 | 0.71 | 0.00 | 0.44 | 0.55 | 0.62 | 0.71 |\n| myeloid dendritic cell | 1 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| plasmacytoid dendritic cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| basophil | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| hematopoietic stem cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| fibroblast | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |", | |
| "ref_accuracy": "| Cell Type | N cells | celltypist | knn bbknn | knn harmony | knn on scvi | onclass | scanvi | svm | xgboost | Consensus Prediction |\n| --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |\n| B cell | 14890 | 0.99 | 0.99 | 0.99 | 0.99 | 0.00 | 0.98 | 0.99 | 0.99 | 1.00 |\n| neutrophil | 13395 | 0.99 | 1.00 | 0.99 | 0.99 | 0.00 | 0.99 | 0.99 | 0.99 | 1.00 |\n| CD8-positive, alpha-beta T cell | 9805 | 0.85 | 0.92 | 0.94 | 0.92 | 0.00 | 0.83 | 0.79 | 0.85 | 0.92 |\n| classical monocyte | 3993 | 0.82 | 0.87 | 0.87 | 0.86 | 0.00 | 0.82 | 0.83 | 0.86 | 0.89 |\n| plasma cell | 3589 | 0.99 | 0.98 | 0.99 | 0.99 | 0.00 | 0.99 | 0.99 | 0.99 | 0.99 |\n| natural killer cell | 3557 | 0.92 | 0.95 | 0.96 | 0.96 | 0.00 | 0.95 | 0.94 | 0.94 | 0.96 |\n| monocyte | 2790 | 0.68 | 0.76 | 0.79 | 0.75 | 0.00 | 0.75 | 0.70 | 0.76 | 0.81 |\n| macrophage | 2505 | 0.92 | 0.94 | 0.95 | 0.93 | 0.00 | 0.93 | 0.93 | 0.94 | 0.95 |\n| CD4-positive, alpha-beta T cell | 2510 | 0.43 | 0.63 | 0.63 | 0.56 | 0.00 | 0.45 | 0.52 | 0.62 | 0.66 |\n| naive thymus-derived CD4-positive, alpha-beta T cell | 2096 | 0.66 | 0.67 | 0.76 | 0.68 | 0.00 | 0.72 | 0.70 | 0.76 | 0.79 |\n| endothelial cell | 1214 | 0.98 | 0.98 | 0.98 | 0.97 | 0.00 | 0.97 | 0.98 | 0.98 | 0.98 |\n| mature NK T cell | 923 | 0.73 | 0.79 | 0.82 | 0.80 | 0.00 | 0.77 | 0.67 | 0.74 | 0.84 |\n| naive thymus-derived CD8-positive, alpha-beta T cell | 555 | 0.46 | 0.31 | 0.70 | 0.56 | 0.00 | 0.55 | 0.52 | 0.54 | 0.64 |\n| erythrocyte | 363 | 0.91 | 0.96 | 0.97 | 0.97 | 0.00 | 0.96 | 0.96 | 0.88 | 0.98 |\n| intermediate monocyte | 363 | 0.26 | 0.12 | 0.15 | 0.05 | 0.00 | 0.44 | 0.48 | 0.49 | 0.59 |\n| regulatory T cell | 314 | 0.46 | 0.53 | 0.60 | 0.46 | 0.00 | 0.53 | 0.61 | 0.65 | 0.72 |\n| innate lymphoid cell | 157 | 0.74 | 0.87 | 0.87 | 0.83 | 0.00 | 0.77 | 0.79 | 0.89 | 0.88 |\n| T cell | 134 | 0.66 | 0.64 | 0.73 | 0.68 | 0.00 | 0.47 | 0.69 | 0.63 | 0.71 |\n| non-classical monocyte | 113 | 0.00 | 0.07 | 0.27 | 0.18 | 0.00 | 0.33 | 0.66 | 0.75 | 0.57 |\n| hematopoietic precursor cell | 62 | 0.56 | 0.78 | 0.77 | 0.76 | 0.00 | 0.78 | 0.81 | 0.83 | 0.85 |\n| platelet | 48 | 0.35 | 0.66 | 0.63 | 0.79 | 0.00 | 0.40 | 0.93 | 0.79 | 0.91 |\n| myeloid dendritic cell | 16 | 0.00 | 0.00 | 0.41 | 0.00 | 0.00 | 0.16 | 0.84 | 0.91 | 0.93 |\n| plasmacytoid dendritic cell | 6 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.27 | 1.00 | 1.00 | 1.00 |\n| basophil | 2 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.06 | 0.57 | 1.00 | 1.00 |\n| hematopoietic stem cell | 2 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.19 | 1.00 | 0.80 | 0.00 |\n| fibroblast | 1 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.29 | 1.00 | 1.00 | 1.00 |" | |
| } |