| { | |
| "query_accuracy": "| Cell Type | N cells | celltypist | knn bbknn | knn harmony | knn on scvi | onclass | scanvi | svm | xgboost | Consensus Prediction |\n| --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |\n| fibroblast | 646 | 0.97 | 0.96 | 0.98 | 0.96 | 0.00 | 0.95 | 0.96 | 0.97 | 0.99 |\n| CD4-positive, alpha-beta T cell | 568 | 0.90 | 0.91 | 0.89 | 0.84 | 0.00 | 0.83 | 0.90 | 0.91 | 0.91 |\n| mononuclear phagocyte | 514 | 0.96 | 0.90 | 0.97 | 0.89 | 0.00 | 0.92 | 0.94 | 0.94 | 0.97 |\n| plasma cell | 418 | 0.99 | 0.98 | 0.95 | 0.89 | 0.00 | 0.94 | 1.00 | 1.00 | 0.99 |\n| B cell | 213 | 0.96 | 0.94 | 0.94 | 0.84 | 0.00 | 0.92 | 0.94 | 0.92 | 0.96 |\n| epithelial cell | 170 | 0.97 | 0.97 | 0.98 | 0.93 | 0.00 | 0.96 | 0.98 | 0.99 | 0.99 |\n| CD8-positive, alpha-beta T cell | 168 | 0.65 | 0.72 | 0.72 | 0.65 | 0.00 | 0.61 | 0.71 | 0.74 | 0.72 |\n| macrophage | 108 | 0.77 | 0.20 | 0.82 | 0.38 | 0.00 | 0.70 | 0.76 | 0.77 | 0.82 |\n| monocyte | 116 | 0.88 | 0.89 | 0.91 | 0.89 | 0.00 | 0.84 | 0.83 | 0.83 | 0.91 |\n| mast cell | 106 | 0.99 | 0.99 | 1.00 | 0.94 | 0.00 | 0.93 | 1.00 | 0.99 | 1.00 |\n| neutrophil | 98 | 1.00 | 1.00 | 0.99 | 0.97 | 0.00 | 0.98 | 0.99 | 0.99 | 1.00 |\n| tissue-resident macrophage | 58 | 0.75 | 0.07 | 0.81 | 0.82 | 0.00 | 0.76 | 0.72 | 0.79 | 0.92 |\n| endothelial cell of lymphatic vessel | 52 | 0.99 | 0.96 | 0.98 | 0.97 | 0.00 | 0.91 | 0.97 | 0.96 | 0.98 |\n| regulatory T cell | 22 | 0.53 | 0.00 | 0.17 | 0.00 | 0.00 | 0.44 | 0.60 | 0.89 | 0.56 |\n| natural killer cell | 11 | 0.49 | 0.48 | 0.48 | 0.54 | 0.00 | 0.39 | 0.50 | 0.48 | 0.52 |\n| mature NK T cell | 11 | 0.22 | 0.17 | 0.40 | 0.38 | 0.00 | 0.37 | 0.67 | 0.58 | 0.55 |\n| T cell | 10 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.08 | 0.35 | 0.11 | 0.00 |\n| interstitial cell of Cajal | 4 | 0.89 | 0.00 | 1.00 | 0.89 | 0.00 | 0.50 | 1.00 | 1.00 | 1.00 |\n| smooth muscle cell | 3 | 0.55 | 0.50 | 0.50 | 0.40 | 0.00 | 0.55 | 0.44 | 0.60 | 0.60 |\n| enteroendocrine cell | 1 | 1.00 | 1.00 | 1.00 | 0.00 | 0.00 | 0.22 | 1.00 | 1.00 | 1.00 |", | |
| "ref_accuracy": "| Cell Type | N cells | celltypist | knn bbknn | knn harmony | knn on scvi | onclass | scanvi | svm | xgboost | Consensus Prediction |\n| --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |\n| fibroblast | 5899 | 0.97 | 0.95 | 0.98 | 0.96 | 0.00 | 0.97 | 0.97 | 0.97 | 0.99 |\n| CD4-positive, alpha-beta T cell | 5216 | 0.91 | 0.93 | 0.93 | 0.86 | 0.00 | 0.88 | 0.92 | 0.94 | 0.94 |\n| mononuclear phagocyte | 4822 | 0.96 | 0.90 | 0.97 | 0.92 | 0.00 | 0.95 | 0.95 | 0.95 | 0.97 |\n| plasma cell | 3759 | 0.99 | 0.97 | 0.96 | 0.90 | 0.00 | 0.96 | 0.99 | 0.99 | 0.99 |\n| B cell | 1968 | 0.94 | 0.93 | 0.95 | 0.86 | 0.00 | 0.93 | 0.95 | 0.93 | 0.95 |\n| epithelial cell | 1428 | 0.97 | 0.97 | 0.98 | 0.93 | 0.00 | 0.96 | 0.98 | 0.98 | 0.98 |\n| CD8-positive, alpha-beta T cell | 1418 | 0.72 | 0.77 | 0.79 | 0.68 | 0.00 | 0.75 | 0.81 | 0.82 | 0.82 |\n| macrophage | 955 | 0.79 | 0.25 | 0.83 | 0.63 | 0.00 | 0.81 | 0.84 | 0.86 | 0.87 |\n| monocyte | 938 | 0.85 | 0.86 | 0.88 | 0.87 | 0.00 | 0.85 | 0.85 | 0.86 | 0.89 |\n| mast cell | 861 | 0.98 | 0.97 | 0.97 | 0.94 | 0.00 | 0.93 | 0.98 | 0.98 | 0.98 |\n| neutrophil | 830 | 1.00 | 0.99 | 0.99 | 0.97 | 0.00 | 0.99 | 0.99 | 0.99 | 1.00 |\n| tissue-resident macrophage | 589 | 0.75 | 0.10 | 0.84 | 0.79 | 0.00 | 0.81 | 0.75 | 0.82 | 0.90 |\n| endothelial cell of lymphatic vessel | 498 | 0.99 | 0.99 | 0.98 | 0.93 | 0.00 | 0.96 | 0.99 | 0.98 | 0.99 |\n| regulatory T cell | 207 | 0.41 | 0.03 | 0.33 | 0.02 | 0.00 | 0.49 | 0.66 | 0.92 | 0.62 |\n| natural killer cell | 112 | 0.66 | 0.74 | 0.77 | 0.69 | 0.00 | 0.72 | 0.90 | 0.88 | 0.86 |\n| mature NK T cell | 76 | 0.48 | 0.10 | 0.49 | 0.43 | 0.00 | 0.62 | 0.86 | 0.83 | 0.87 |\n| T cell | 66 | 0.00 | 0.00 | 0.03 | 0.09 | 0.00 | 0.40 | 0.77 | 0.75 | 0.78 |\n| interstitial cell of Cajal | 67 | 0.80 | 0.00 | 0.86 | 0.86 | 0.00 | 0.63 | 0.96 | 0.90 | 0.91 |\n| smooth muscle cell | 24 | 0.61 | 0.65 | 0.56 | 0.54 | 0.00 | 0.52 | 0.80 | 0.84 | 0.81 |\n| enteroendocrine cell | 24 | 0.86 | 0.33 | 0.85 | 0.64 | 0.00 | 0.61 | 0.94 | 0.89 | 0.92 |" | |
| } |