| { | |
| "query_accuracy": "| Cell Type | N cells | celltypist | knn bbknn | knn harmony | knn on scvi | onclass | scanvi | svm | xgboost | Consensus Prediction |\n| --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |\n| basal cell | 1030 | 0.99 | 0.98 | 0.98 | 0.96 | 0.00 | 0.90 | 0.98 | 0.98 | 0.99 |\n| neutrophil | 452 | 0.99 | 0.99 | 0.99 | 0.95 | 0.00 | 0.90 | 0.99 | 0.98 | 0.99 |\n| fibroblast | 172 | 0.96 | 0.95 | 0.97 | 0.98 | 0.00 | 0.94 | 0.97 | 0.98 | 0.98 |\n| CD8-positive, alpha-beta T cell | 133 | 0.92 | 0.91 | 0.92 | 0.91 | 0.00 | 0.91 | 0.93 | 0.95 | 0.92 |\n| ciliated columnar cell of tracheobronchial tree | 72 | 0.97 | 0.96 | 0.94 | 0.91 | 0.00 | 0.79 | 0.95 | 0.97 | 0.97 |\n| macrophage | 70 | 0.95 | 0.97 | 0.96 | 0.93 | 0.00 | 0.94 | 0.97 | 0.97 | 0.97 |\n| B cell | 67 | 0.98 | 0.98 | 0.98 | 0.98 | 0.00 | 0.98 | 0.99 | 0.99 | 0.99 |\n| endothelial cell | 48 | 0.96 | 0.96 | 0.98 | 0.98 | 0.00 | 0.89 | 0.99 | 0.98 | 0.99 |\n| serous cell of epithelium of trachea | 30 | 0.67 | 0.00 | 0.64 | 0.64 | 0.00 | 0.67 | 0.65 | 0.71 | 0.70 |\n| plasma cell | 20 | 0.90 | 0.90 | 0.93 | 0.84 | 0.00 | 0.95 | 0.95 | 0.90 | 0.95 |\n| CD4-positive, alpha-beta T cell | 33 | 0.83 | 0.66 | 0.77 | 0.71 | 0.00 | 0.78 | 0.81 | 0.88 | 0.79 |\n| mucus secreting cell | 33 | 0.76 | 0.81 | 0.84 | 0.84 | 0.00 | 0.68 | 0.77 | 0.85 | 0.87 |\n| tracheal goblet cell | 35 | 0.76 | 0.73 | 0.79 | 0.78 | 0.00 | 0.67 | 0.92 | 0.86 | 0.93 |\n| connective tissue cell | 10 | 0.80 | 0.00 | 0.95 | 1.00 | 0.00 | 0.83 | 0.95 | 0.91 | 1.00 |\n| smooth muscle cell | 15 | 0.78 | 0.80 | 0.76 | 0.88 | 0.00 | 0.82 | 0.80 | 0.85 | 0.80 |\n| mast cell | 16 | 0.97 | 0.97 | 0.97 | 0.97 | 0.00 | 0.97 | 0.97 | 0.97 | 0.97 |\n| monocyte | 7 | 0.57 | 0.73 | 0.73 | 0.44 | 0.00 | 0.59 | 0.83 | 0.73 | 0.73 |\n| natural killer cell | 8 | 0.70 | 0.62 | 0.82 | 0.78 | 0.00 | 0.76 | 0.82 | 0.70 | 0.74 |\n| granulocyte | 5 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.12 | 0.43 | 0.22 | 0.00 |\n| mature NK T cell | 5 | 0.25 | 0.00 | 0.00 | 0.50 | 0.00 | 0.38 | 0.91 | 0.80 | 0.50 |\n| T cell | 2 | 0.80 | 0.00 | 1.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| ionocyte | 1 | 1.00 | 0.00 | 1.00 | 1.00 | 0.00 | 0.40 | 1.00 | 1.00 | 1.00 |\n| regulatory T cell | 3 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| intermediate monocyte | 1 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| non-classical monocyte | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| innate lymphoid cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| plasmacytoid dendritic cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |\n| myeloid dendritic cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |", | |
| "ref_accuracy": "| Cell Type | N cells | celltypist | knn bbknn | knn harmony | knn on scvi | onclass | scanvi | svm | xgboost | Consensus Prediction |\n| --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |\n| basal cell | 9217 | 0.98 | 0.98 | 0.99 | 0.96 | 0.00 | 0.94 | 0.98 | 0.98 | 0.99 |\n| neutrophil | 4232 | 0.99 | 0.99 | 0.99 | 0.95 | 0.00 | 0.94 | 1.00 | 0.99 | 1.00 |\n| fibroblast | 1628 | 0.95 | 0.94 | 0.96 | 0.97 | 0.00 | 0.96 | 0.99 | 0.99 | 0.99 |\n| CD8-positive, alpha-beta T cell | 1069 | 0.91 | 0.92 | 0.92 | 0.91 | 0.00 | 0.94 | 0.98 | 0.98 | 0.95 |\n| ciliated columnar cell of tracheobronchial tree | 641 | 0.96 | 0.98 | 0.95 | 0.96 | 0.00 | 0.88 | 0.98 | 0.98 | 0.98 |\n| macrophage | 642 | 0.92 | 0.93 | 0.94 | 0.91 | 0.00 | 0.96 | 0.99 | 0.99 | 0.96 |\n| B cell | 560 | 0.97 | 0.97 | 0.97 | 0.96 | 0.00 | 0.97 | 1.00 | 1.00 | 0.99 |\n| endothelial cell | 538 | 0.98 | 0.98 | 0.98 | 0.96 | 0.00 | 0.96 | 0.99 | 0.99 | 0.99 |\n| serous cell of epithelium of trachea | 296 | 0.72 | 0.07 | 0.87 | 0.82 | 0.00 | 0.83 | 0.76 | 0.80 | 0.93 |\n| plasma cell | 272 | 0.97 | 0.98 | 0.98 | 0.93 | 0.00 | 0.99 | 1.00 | 0.99 | 1.00 |\n| CD4-positive, alpha-beta T cell | 245 | 0.72 | 0.67 | 0.72 | 0.66 | 0.00 | 0.87 | 0.96 | 0.97 | 0.83 |\n| mucus secreting cell | 237 | 0.69 | 0.78 | 0.85 | 0.86 | 0.00 | 0.81 | 0.86 | 0.85 | 0.89 |\n| tracheal goblet cell | 197 | 0.73 | 0.56 | 0.81 | 0.78 | 0.00 | 0.59 | 0.85 | 0.84 | 0.91 |\n| connective tissue cell | 142 | 0.75 | 0.00 | 0.86 | 0.95 | 0.00 | 0.83 | 0.96 | 0.97 | 0.98 |\n| smooth muscle cell | 116 | 0.79 | 0.82 | 0.82 | 0.85 | 0.00 | 0.83 | 0.92 | 0.92 | 0.88 |\n| mast cell | 103 | 0.96 | 0.96 | 0.96 | 0.95 | 0.00 | 0.95 | 1.00 | 1.00 | 0.98 |\n| monocyte | 74 | 0.58 | 0.62 | 0.68 | 0.45 | 0.00 | 0.78 | 0.97 | 0.97 | 0.84 |\n| natural killer cell | 56 | 0.68 | 0.70 | 0.63 | 0.73 | 0.00 | 0.81 | 0.92 | 0.90 | 0.90 |\n| granulocyte | 34 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.17 | 0.80 | 0.62 | 0.16 |\n| mature NK T cell | 32 | 0.29 | 0.21 | 0.30 | 0.46 | 0.00 | 0.45 | 0.93 | 0.96 | 0.82 |\n| T cell | 17 | 0.62 | 0.11 | 0.42 | 0.35 | 0.00 | 0.62 | 1.00 | 1.00 | 0.87 |\n| ionocyte | 17 | 0.64 | 0.00 | 0.77 | 0.71 | 0.00 | 0.81 | 1.00 | 1.00 | 0.94 |\n| regulatory T cell | 14 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.82 | 1.00 | 1.00 | 0.73 |\n| intermediate monocyte | 15 | 0.00 | 0.00 | 0.21 | 0.12 | 0.00 | 0.62 | 1.00 | 1.00 | 0.50 |\n| non-classical monocyte | 5 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.32 | 1.00 | 1.00 | 0.57 |\n| innate lymphoid cell | 2 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.67 | 1.00 | 1.00 | 1.00 |\n| plasmacytoid dendritic cell | 1 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.40 | 1.00 | 1.00 | 1.00 |\n| myeloid dendritic cell | 1 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.40 | 1.00 | 1.00 | 1.00 |" | |
| } |