Instructions to use rmaser/aloe-arch with libraries, inference providers, notebooks, and local apps. Follow these links to get started.
- Libraries
- Transformers
How to use rmaser/aloe-arch with Transformers:
# Load model directly from transformers import AutoModel model = AutoModel.from_pretrained("rmaser/aloe-arch", device_map="auto") - Notebooks
- Google Colab
- Kaggle
File size: 6,069 Bytes
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# Vendored from ``src/models/mixins/bcos_model.py``; kept here for Hub self-containment.
#
# No ``beartype`` / ``jaxtyping`` here: this file is loaded on the Hub via
# ``trust_remote_code`` and must stay transformers-only at runtime.
from __future__ import annotations
from typing import Literal, Optional, Union
import numpy as np
import torch
import torchvision.transforms.functional as TF
from matplotlib.axes import Axes
from matplotlib.image import AxesImage
TensorLike = Union[torch.Tensor, np.ndarray]
def _check_non_neg_int(name: str, n: int) -> None:
if not isinstance(n, int) or n < 0:
raise TypeError(f"{name} must be a non-negative int, got {n!r}")
def _check_closed_percent(name: str, x: float) -> None:
if not isinstance(x, (int, float)):
raise TypeError(f"{name} must be a number, got {type(x).__name__}")
v = float(x)
if not 0.0 <= v <= 100.0:
raise ValueError(f"{name} must be in [0, 100], got {v}")
def _check_open_percent(name: str, x: float) -> None:
if not isinstance(x, (int, float)):
raise TypeError(f"{name} must be a number, got {type(x).__name__}")
v = float(x)
if not 0.0 < v <= 100.0:
raise ValueError(f"{name} must be in (0, 100], got {v}")
def _check_pos_float(name: str, x: float) -> None:
if not isinstance(x, (int, float)):
raise TypeError(f"{name} must be a number, got {type(x).__name__}")
if float(x) <= 0.0:
raise ValueError(f"{name} must be > 0, got {x}")
def _check_non_empty_str(name: str, s: str) -> None:
if not isinstance(s, str) or len(s) == 0:
raise TypeError(f"{name} must be a non-empty str, got {s!r}")
def gradient_to_image(
image: torch.Tensor,
linear_mapping: torch.Tensor,
smooth: int = 15,
alpha_percentile: float = 99.5,
to_numpy: bool = True,
smooth_sigma: Optional[float] = None,
) -> torch.Tensor | np.ndarray:
"""
Build an RGBA explanation tensor (or NumPy array if ``to_numpy``).
Expects ``image`` and ``linear_mapping`` of shape ``(N, C, H, W)`` with ``C >= 3``
(typically ``C == 6`` for B-cos).
"""
_check_non_neg_int("smooth", smooth)
_check_closed_percent("alpha_percentile", alpha_percentile)
if smooth_sigma is not None:
_check_pos_float("smooth_sigma", smooth_sigma)
if linear_mapping.ndim != 4 or image.ndim != 4:
raise ValueError(
f"Expected 4-D tensors; got image.ndim={image.ndim}, linear_mapping.ndim={linear_mapping.ndim}"
)
if image.shape != linear_mapping.shape:
raise ValueError(
f"image shape {tuple(image.shape)} != linear_mapping shape {tuple(linear_mapping.shape)}"
)
contribs = (image * linear_mapping).sum(1, keepdim=True)
denominator = linear_mapping.abs().max(1, keepdim=True).values + 1e-12
rgb_grad = linear_mapping * torch.reciprocal(denominator)
rgb_grad = rgb_grad.clamp(min=0)
if rgb_grad.shape[1] >= 6:
denominator2 = rgb_grad[:, :3] + rgb_grad[:, 3:6] + 1e-12
rgb_grad = rgb_grad[:, :3] * torch.reciprocal(denominator2)
alpha = linear_mapping.norm(p=2, dim=1, keepdim=True)
# Zero alpha where the per-pixel contribution is negative (no positive evidence).
alpha = torch.where(contribs < 0, 0.0, alpha)
if smooth:
sigma_vals = None
if smooth_sigma is not None:
sigma_vals = [float(smooth_sigma), float(smooth_sigma)]
alpha = TF.gaussian_blur(alpha, kernel_size=[smooth, smooth], sigma=sigma_vals)
if alpha.numel() > 0:
B = alpha.shape[0]
alpha_reshaped = alpha.view(B, -1)
# One scalar per batch row: shape (B, 1). ``alpha`` is (B, 1, H, W) — not RGB.
quantiles_per_image = torch.quantile(
alpha_reshaped,
q=float(alpha_percentile) / 100.0,
dim=1,
keepdim=True,
)
# (B,1,1,1) so the per-image divisor broadcasts over H×W (same value every spatial location).
quantiles_for_division = quantiles_per_image.view(B, 1, 1, 1)
alpha = alpha * torch.reciprocal(quantiles_for_division + 1e-12)
alpha = alpha.clip(0, 1)
else:
raise ValueError("Alpha tensor is empty; cannot compute quantiles.")
rgb_grad = torch.concatenate([rgb_grad, alpha], dim=1)
grad_image = rgb_grad.permute(0, 2, 3, 1)
if to_numpy:
return grad_image.cpu().numpy()
return grad_image
def plot_contribution_map(
contribution_map: TensorLike,
ax: Optional[Axes] = None,
vrange: Optional[Union[float, Literal["auto"]]] = None,
vmin: Optional[float] = None,
vmax: Optional[float] = None,
hide_ticks: bool = True,
cmap: str = "bwr",
percentile: float = 99.5,
) -> tuple[Axes, AxesImage]:
"""Plot a 2-D contribution map; returns ``(axes, image_artist)``."""
_check_non_empty_str("cmap", cmap)
_check_open_percent("percentile", percentile)
if isinstance(contribution_map, torch.Tensor):
if contribution_map.ndim != 2:
raise ValueError(f"Contribution map must be 2-D (H, W); got ndim={contribution_map.ndim}")
contribution_map = contribution_map.detach().cpu().numpy()
else:
if contribution_map.ndim != 2:
raise ValueError(f"Contribution map must be 2-D (H, W); got ndim={contribution_map.ndim}")
cutoff = np.percentile(np.abs(contribution_map), percentile)
contribution_map = np.clip(contribution_map, -cutoff, cutoff)
if ax is None:
import matplotlib.pyplot as plt
_, ax = plt.subplots(1)
if vrange is None or vrange == "auto":
vrange_f = float(np.max(np.abs(contribution_map.flatten())))
else:
vrange_f = float(vrange)
im = ax.imshow(
contribution_map,
cmap=cmap,
vmin=-vrange_f if vmin is None else vmin,
vmax=vrange_f if vmax is None else vmax,
)
if hide_ticks:
ax.set_xticks([])
ax.set_yticks([])
return ax, im
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