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classification_flan_t5_base_enriched

Transformers
TensorBoard
Safetensors
t5
text2text-generation
Generated from Trainer
text-generation-inference
Model card Files
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 Metrics Community
Sarah Tariq commited on
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End of training

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README.md ADDED
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+ ---
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+ license: apache-2.0
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+ base_model: google/flan-t5-base
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+ tags:
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+ - generated_from_trainer
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+ model-index:
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+ - name: classification_flan_t5_base_enriched
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+ results: []
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+ ---
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+
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+ <!-- This model card has been generated automatically according to the information the Trainer had access to. You
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+ should probably proofread and complete it, then remove this comment. -->
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+
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+ # classification_flan_t5_base_enriched
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+
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+ This model is a fine-tuned version of [google/flan-t5-base](https://huggingface.co/google/flan-t5-base) on an unknown dataset.
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+ It achieves the following results on the evaluation set:
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+ - Loss: 0.8345
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+ - Classification Report: precision recall f1-score support
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+
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+ ALLERGY 1.0000 0.9167 0.9565 12
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+ ASSESSMENT 0.0000 0.0000 0.0000 11
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+ CC 0.3333 0.1818 0.2353 11
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+ DIAGNOSIS 0.0000 0.0000 0.0000 1
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+ DISPOSITION 0.2000 1.0000 0.3333 1
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+ EDCOURSE 0.0000 0.0000 0.0000 4
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+ EXAM 0.5000 0.2000 0.2857 5
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+ FAM/SOCHX 0.8400 0.9333 0.8842 45
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+ GENHX 0.6620 0.8868 0.7581 53
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+ GYNHX 1.0000 1.0000 1.0000 1
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+ IMAGING 0.3333 1.0000 0.5000 1
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+ IMMUNIZATIONS 1.0000 1.0000 1.0000 1
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+ LABS 0.0000 0.0000 0.0000 1
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+ MEDICATIONS 0.8333 1.0000 0.9091 10
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+ OTHER_HISTORY 0.0000 0.0000 0.0000 3
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+ PASTMEDICALHX 0.6471 0.7857 0.7097 14
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+ PASTSURGICAL 1.0000 0.8571 0.9231 7
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+ PLAN 0.0000 0.0000 0.0000 1
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+ PROCEDURES 0.0000 0.0000 0.0000 1
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+ ROS 0.8462 0.6471 0.7333 17
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+
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+ accuracy 0.7250 200
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+ macro avg 0.4598 0.5204 0.4614 200
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+ weighted avg 0.6618 0.7250 0.6812 200
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+
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+
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+ ## Model description
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+
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+ More information needed
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+
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+ ## Intended uses & limitations
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+
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+ More information needed
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+
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+ ## Training and evaluation data
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+
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+ More information needed
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+
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+ ## Training procedure
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+
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+ ### Training hyperparameters
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+
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+ The following hyperparameters were used during training:
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+ - learning_rate: 0.0001
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+ - train_batch_size: 7
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+ - eval_batch_size: 7
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+ - seed: 42
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+ - optimizer: Adam with betas=(0.9,0.999) and epsilon=1e-08
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+ - lr_scheduler_type: linear
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+ - num_epochs: 20
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+
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+ ### Training results
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+
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+ | Training Loss | Epoch | Step | Validation Loss | Classification Report |
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+ |:-------------:|:-----:|:----:|:---------------:|:--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------:|
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+ | No log | 1.0 | 172 | 0.4392 | precision recall f1-score support
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+
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+ ALLERGY 1.0000 0.9167 0.9565 12
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+ ASSESSMENT 0.0000 0.0000 0.0000 11
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+ CC 0.1455 0.7273 0.2424 11
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+ DIAGNOSIS 0.0000 0.0000 0.0000 1
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+ DISPOSITION 0.0000 0.0000 0.0000 1
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+ EDCOURSE 0.0000 0.0000 0.0000 4
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+ EXAM 0.0000 0.0000 0.0000 5
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+ FAM/SOCHX 0.8148 0.9778 0.8889 45
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+ GENHX 1.0000 0.3962 0.5676 53
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+ GYNHX 0.0000 0.0000 0.0000 1
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+ IMAGING 0.0000 0.0000 0.0000 1
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+ IMMUNIZATIONS 0.0000 0.0000 0.0000 1
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+ LABS 0.0000 0.0000 0.0000 1
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+ MEDICATIONS 0.8333 1.0000 0.9091 10
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+ OTHER_HISTORY 0.0000 0.0000 0.0000 3
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+ PASTMEDICALHX 0.4000 0.8571 0.5455 14
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+ PASTSURGICAL 0.7778 1.0000 0.8750 7
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+ PLAN 0.0000 0.0000 0.0000 1
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+ PROCEDURES 0.0000 0.0000 0.0000 1
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+ ROS 0.6250 0.2941 0.4000 17
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+
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+ accuracy 0.5900 200
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+ macro avg 0.2798 0.3085 0.2692 200
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+ weighted avg 0.6663 0.5900 0.5694 200
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+ |
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+ | No log | 2.0 | 344 | 0.3438 | precision recall f1-score support
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+
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+ ALLERGY 1.0000 0.9167 0.9565 12
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+ ASSESSMENT 0.0000 0.0000 0.0000 11
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+ CC 0.5000 0.2727 0.3529 11
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+ DIAGNOSIS 0.0000 0.0000 0.0000 1
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+ DISPOSITION 0.2000 1.0000 0.3333 1
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+ EDCOURSE 0.0000 0.0000 0.0000 4
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+ EXAM 0.0000 0.0000 0.0000 5
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+ FAM/SOCHX 0.9535 0.9111 0.9318 45
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+ GENHX 0.5833 0.9245 0.7153 53
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+ GYNHX 0.0000 0.0000 0.0000 1
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+ IMAGING 0.0000 0.0000 0.0000 1
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+ IMMUNIZATIONS 0.5000 1.0000 0.6667 1
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+ LABS 0.0000 0.0000 0.0000 1
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+ MEDICATIONS 0.8333 1.0000 0.9091 10
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+ OTHER_HISTORY 0.0000 0.0000 0.0000 3
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+ PASTMEDICALHX 0.6364 0.5000 0.5600 14
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+ PASTSURGICAL 0.5000 1.0000 0.6667 7
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+ PLAN 0.0000 0.0000 0.0000 1
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+ PROCEDURES 0.0000 0.0000 0.0000 1
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+ ROS 0.8333 0.5882 0.6897 17
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+
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+ accuracy 0.7000 200
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+ macro avg 0.3270 0.4057 0.3391 200
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+ weighted avg 0.6347 0.7000 0.6476 200
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+ |
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+ | 0.3577 | 3.0 | 516 | 0.3416 | precision recall f1-score support
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+
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+ ALLERGY 1.0000 0.9167 0.9565 12
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+ ASSESSMENT 0.0000 0.0000 0.0000 11
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+ CC 0.2083 0.4545 0.2857 11
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+ DIAGNOSIS 0.0000 0.0000 0.0000 1
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+ DISPOSITION 0.3333 1.0000 0.5000 1
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+ EDCOURSE 0.0000 0.0000 0.0000 4
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+ EXAM 1.0000 0.2000 0.3333 5
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+ FAM/SOCHX 0.8696 0.8889 0.8791 45
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+ GENHX 0.6769 0.8302 0.7458 53
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+ GYNHX 0.0000 0.0000 0.0000 1
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+ IMAGING 0.0000 0.0000 0.0000 1
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+ IMMUNIZATIONS 1.0000 1.0000 1.0000 1
144
+ LABS 0.0000 0.0000 0.0000 1
145
+ MEDICATIONS 0.8333 1.0000 0.9091 10
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+ OTHER_HISTORY 0.0000 0.0000 0.0000 3
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+ PASTMEDICALHX 0.5500 0.7857 0.6471 14
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+ PASTSURGICAL 1.0000 1.0000 1.0000 7
149
+ PLAN 0.0000 0.0000 0.0000 1
150
+ PROCEDURES 0.0000 0.0000 0.0000 1
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+ ROS 0.8000 0.4706 0.5926 17
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+
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+ accuracy 0.6950 200
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+ macro avg 0.4136 0.4273 0.3925 200
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+ weighted avg 0.6613 0.6950 0.6605 200
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+ |
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+ | 0.3577 | 4.0 | 688 | 0.4118 | precision recall f1-score support
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+
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+ ALLERGY 1.0000 0.9167 0.9565 12
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+ ASSESSMENT 0.0000 0.0000 0.0000 11
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+ CC 0.3333 0.0909 0.1429 11
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+ DIAGNOSIS 0.0000 0.0000 0.0000 1
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+ DISPOSITION 0.1429 1.0000 0.2500 1
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+ EDCOURSE 0.0000 0.0000 0.0000 4
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+ EXAM 0.5000 0.2000 0.2857 5
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+ FAM/SOCHX 0.8431 0.9556 0.8958 45
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+ GENHX 0.6438 0.8868 0.7460 53
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+ GYNHX 0.0000 0.0000 0.0000 1
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+ IMAGING 1.0000 1.0000 1.0000 1
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+ IMMUNIZATIONS 1.0000 1.0000 1.0000 1
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+ LABS 0.0000 0.0000 0.0000 1
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+ MEDICATIONS 0.8333 1.0000 0.9091 10
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+ OTHER_HISTORY 0.0000 0.0000 0.0000 3
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+ PASTMEDICALHX 0.6667 0.7143 0.6897 14
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+ PASTSURGICAL 0.7778 1.0000 0.8750 7
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+ PLAN 0.0000 0.0000 0.0000 1
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+ PROCEDURES 0.0000 0.0000 0.0000 1
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+ ROS 0.8571 0.7059 0.7742 17
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+
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+ accuracy 0.7250 200
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+ macro avg 0.4299 0.4735 0.4262 200
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+ weighted avg 0.6503 0.7250 0.6731 200
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+ |
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+ | 0.3577 | 5.0 | 860 | 0.4030 | precision recall f1-score support
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+
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+ ALLERGY 1.0000 0.9167 0.9565 12
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+ ASSESSMENT 0.0000 0.0000 0.0000 11
188
+ CC 0.2778 0.4545 0.3448 11
189
+ DIAGNOSIS 0.0000 0.0000 0.0000 1
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+ DISPOSITION 0.3333 1.0000 0.5000 1
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+ EDCOURSE 0.0000 0.0000 0.0000 4
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+ EXAM 0.6667 0.4000 0.5000 5
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+ FAM/SOCHX 0.8511 0.8889 0.8696 45
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+ GENHX 0.7077 0.8679 0.7797 53
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+ GYNHX 1.0000 1.0000 1.0000 1
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+ IMAGING 1.0000 1.0000 1.0000 1
197
+ IMMUNIZATIONS 1.0000 1.0000 1.0000 1
198
+ LABS 0.0000 0.0000 0.0000 1
199
+ MEDICATIONS 0.8333 1.0000 0.9091 10
200
+ OTHER_HISTORY 0.0000 0.0000 0.0000 3
201
+ PASTMEDICALHX 0.7333 0.7857 0.7586 14
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+ PASTSURGICAL 1.0000 0.8571 0.9231 7
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+ PLAN 0.0000 0.0000 0.0000 1
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+ PROCEDURES 0.0000 0.0000 0.0000 1
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+ ROS 0.7500 0.7059 0.7273 17
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+
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+ accuracy 0.7350 200
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+ macro avg 0.5077 0.5438 0.5134 200
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+ weighted avg 0.6794 0.7350 0.7013 200
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+ |
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+ | 0.0808 | 6.0 | 1032 | 0.5599 | precision recall f1-score support
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+
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+ ALLERGY 1.0000 0.9167 0.9565 12
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+ ASSESSMENT 0.0000 0.0000 0.0000 11
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+ CC 0.2500 0.0909 0.1333 11
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+ DIAGNOSIS 0.0000 0.0000 0.0000 1
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+ DISPOSITION 0.1250 1.0000 0.2222 1
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+ EDCOURSE 0.0000 0.0000 0.0000 4
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+ EXAM 0.5000 0.2000 0.2857 5
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+ FAM/SOCHX 0.8511 0.8889 0.8696 45
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+ GENHX 0.6267 0.8868 0.7344 53
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+ GYNHX 1.0000 1.0000 1.0000 1
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+ IMAGING 1.0000 1.0000 1.0000 1
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+ IMMUNIZATIONS 1.0000 1.0000 1.0000 1
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+ LABS 0.0000 0.0000 0.0000 1
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+ MEDICATIONS 0.9091 1.0000 0.9524 10
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+ OTHER_HISTORY 0.0000 0.0000 0.0000 3
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+ PASTMEDICALHX 0.5882 0.7143 0.6452 14
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+ PASTSURGICAL 0.8750 1.0000 0.9333 7
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+ PLAN 0.0000 0.0000 0.0000 1
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+ PROCEDURES 0.0000 0.0000 0.0000 1
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+ ROS 0.8462 0.6471 0.7333 17
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+
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+ accuracy 0.7100 200
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+ macro avg 0.4786 0.5172 0.4733 200
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+ weighted avg 0.6486 0.7100 0.6660 200
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+ |
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+ | 0.0808 | 7.0 | 1204 | 0.5132 | precision recall f1-score support
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+
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+ ALLERGY 1.0000 0.9167 0.9565 12
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+ ASSESSMENT 0.0000 0.0000 0.0000 11
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+ CC 0.3333 0.2727 0.3000 11
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+ DIAGNOSIS 0.0000 0.0000 0.0000 1
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+ DISPOSITION 0.1429 1.0000 0.2500 1
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+ EDCOURSE 0.0000 0.0000 0.0000 4
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+ EXAM 0.5000 0.2000 0.2857 5
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+ FAM/SOCHX 0.8542 0.9111 0.8817 45
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+ GENHX 0.6761 0.9057 0.7742 53
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+ GYNHX 0.0000 0.0000 0.0000 1
250
+ IMAGING 1.0000 1.0000 1.0000 1
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+ IMMUNIZATIONS 0.5000 1.0000 0.6667 1
252
+ LABS 0.0000 0.0000 0.0000 1
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+ MEDICATIONS 0.8333 1.0000 0.9091 10
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+ OTHER_HISTORY 0.0000 0.0000 0.0000 3
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+ PASTMEDICALHX 0.7857 0.7857 0.7857 14
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+ PASTSURGICAL 0.8750 1.0000 0.9333 7
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+ PLAN 0.0000 0.0000 0.0000 1
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+ PROCEDURES 0.0000 0.0000 0.0000 1
259
+ ROS 0.7857 0.6471 0.7097 17
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+
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+ accuracy 0.7300 200
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+ macro avg 0.4143 0.4819 0.4226 200
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+ weighted avg 0.6645 0.7300 0.6876 200
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+ |
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+ | 0.0808 | 8.0 | 1376 | 0.6372 | precision recall f1-score support
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+
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+ ALLERGY 1.0000 0.9167 0.9565 12
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+ ASSESSMENT 0.0000 0.0000 0.0000 11
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+ CC 0.3333 0.4545 0.3846 11
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+ DIAGNOSIS 0.0000 0.0000 0.0000 1
271
+ DISPOSITION 0.2500 1.0000 0.4000 1
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+ EDCOURSE 0.0000 0.0000 0.0000 4
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+ EXAM 0.5000 0.2000 0.2857 5
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+ FAM/SOCHX 0.8400 0.9333 0.8842 45
275
+ GENHX 0.7302 0.8679 0.7931 53
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+ GYNHX 1.0000 1.0000 1.0000 1
277
+ IMAGING 0.5000 1.0000 0.6667 1
278
+ IMMUNIZATIONS 0.5000 1.0000 0.6667 1
279
+ LABS 0.0000 0.0000 0.0000 1
280
+ MEDICATIONS 0.8333 1.0000 0.9091 10
281
+ OTHER_HISTORY 0.0000 0.0000 0.0000 3
282
+ PASTMEDICALHX 0.7333 0.7857 0.7586 14
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+ PASTSURGICAL 1.0000 0.8571 0.9231 7
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+ PLAN 0.0000 0.0000 0.0000 1
285
+ PROCEDURES 0.0000 0.0000 0.0000 1
286
+ ROS 0.7857 0.6471 0.7097 17
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+
288
+ accuracy 0.7350 200
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+ macro avg 0.4503 0.5331 0.4669 200
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+ weighted avg 0.6794 0.7350 0.6997 200
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+ |
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+ | 0.034 | 9.0 | 1548 | 0.7346 | precision recall f1-score support
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+
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+ ALLERGY 1.0000 0.9167 0.9565 12
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+ ASSESSMENT 0.0000 0.0000 0.0000 11
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+ CC 0.3333 0.0909 0.1429 11
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+ DIAGNOSIS 0.0000 0.0000 0.0000 1
298
+ DISPOSITION 0.1250 1.0000 0.2222 1
299
+ EDCOURSE 0.0000 0.0000 0.0000 4
300
+ EXAM 0.5000 0.2000 0.2857 5
301
+ FAM/SOCHX 0.8542 0.9111 0.8817 45
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+ GENHX 0.6026 0.8868 0.7176 53
303
+ GYNHX 1.0000 1.0000 1.0000 1
304
+ IMAGING 1.0000 1.0000 1.0000 1
305
+ IMMUNIZATIONS 1.0000 1.0000 1.0000 1
306
+ LABS 0.0000 0.0000 0.0000 1
307
+ MEDICATIONS 0.8333 1.0000 0.9091 10
308
+ OTHER_HISTORY 0.0000 0.0000 0.0000 3
309
+ PASTMEDICALHX 0.6429 0.6429 0.6429 14
310
+ PASTSURGICAL 1.0000 0.8571 0.9231 7
311
+ PLAN 0.0000 0.0000 0.0000 1
312
+ PROCEDURES 0.0000 0.0000 0.0000 1
313
+ ROS 0.7692 0.5882 0.6667 17
314
+
315
+ accuracy 0.7000 200
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+ macro avg 0.4830 0.5047 0.4674 200
317
+ weighted avg 0.6454 0.7000 0.6565 200
318
+ |
319
+ | 0.034 | 10.0 | 1720 | 0.6654 | precision recall f1-score support
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+
321
+ ALLERGY 1.0000 0.9167 0.9565 12
322
+ ASSESSMENT 0.0000 0.0000 0.0000 11
323
+ CC 0.4286 0.5455 0.4800 11
324
+ DIAGNOSIS 0.0000 0.0000 0.0000 1
325
+ DISPOSITION 0.2000 1.0000 0.3333 1
326
+ EDCOURSE 0.0000 0.0000 0.0000 4
327
+ EXAM 0.5000 0.2000 0.2857 5
328
+ FAM/SOCHX 0.8600 0.9556 0.9053 45
329
+ GENHX 0.7302 0.8679 0.7931 53
330
+ GYNHX 1.0000 1.0000 1.0000 1
331
+ IMAGING 1.0000 1.0000 1.0000 1
332
+ IMMUNIZATIONS 1.0000 1.0000 1.0000 1
333
+ LABS 0.0000 0.0000 0.0000 1
334
+ MEDICATIONS 0.8333 1.0000 0.9091 10
335
+ OTHER_HISTORY 0.0000 0.0000 0.0000 3
336
+ PASTMEDICALHX 0.6667 0.7143 0.6897 14
337
+ PASTSURGICAL 1.0000 0.8571 0.9231 7
338
+ PLAN 0.0000 0.0000 0.0000 1
339
+ PROCEDURES 0.0000 0.0000 0.0000 1
340
+ ROS 0.8000 0.7059 0.7500 17
341
+
342
+ accuracy 0.7450 200
343
+ macro avg 0.5009 0.5381 0.5013 200
344
+ weighted avg 0.6904 0.7450 0.7112 200
345
+ |
346
+ | 0.034 | 11.0 | 1892 | 0.7455 | precision recall f1-score support
347
+
348
+ ALLERGY 1.0000 0.9167 0.9565 12
349
+ ASSESSMENT 0.0000 0.0000 0.0000 11
350
+ CC 0.3333 0.1818 0.2353 11
351
+ DIAGNOSIS 0.0000 0.0000 0.0000 1
352
+ DISPOSITION 0.1429 1.0000 0.2500 1
353
+ EDCOURSE 0.0000 0.0000 0.0000 4
354
+ EXAM 0.6667 0.4000 0.5000 5
355
+ FAM/SOCHX 0.8511 0.8889 0.8696 45
356
+ GENHX 0.6486 0.9057 0.7559 53
357
+ GYNHX 1.0000 1.0000 1.0000 1
358
+ IMAGING 0.5000 1.0000 0.6667 1
359
+ IMMUNIZATIONS 1.0000 1.0000 1.0000 1
360
+ LABS 0.0000 0.0000 0.0000 1
361
+ MEDICATIONS 0.8333 1.0000 0.9091 10
362
+ OTHER_HISTORY 0.0000 0.0000 0.0000 3
363
+ PASTMEDICALHX 0.6250 0.7143 0.6667 14
364
+ PASTSURGICAL 1.0000 0.8571 0.9231 7
365
+ PLAN 0.0000 0.0000 0.0000 1
366
+ PROCEDURES 0.0000 0.0000 0.0000 1
367
+ ROS 0.8462 0.6471 0.7333 17
368
+
369
+ accuracy 0.7200 200
370
+ macro avg 0.4724 0.5256 0.4733 200
371
+ weighted avg 0.6639 0.7200 0.6801 200
372
+ |
373
+ | 0.0107 | 12.0 | 2064 | 0.7687 | precision recall f1-score support
374
+
375
+ ALLERGY 1.0000 0.9167 0.9565 12
376
+ ASSESSMENT 0.0000 0.0000 0.0000 11
377
+ CC 0.4286 0.2727 0.3333 11
378
+ DIAGNOSIS 0.0000 0.0000 0.0000 1
379
+ DISPOSITION 0.1667 1.0000 0.2857 1
380
+ EDCOURSE 0.0000 0.0000 0.0000 4
381
+ EXAM 0.6667 0.4000 0.5000 5
382
+ FAM/SOCHX 0.8478 0.8667 0.8571 45
383
+ GENHX 0.6575 0.9057 0.7619 53
384
+ GYNHX 1.0000 1.0000 1.0000 1
385
+ IMAGING 0.3333 1.0000 0.5000 1
386
+ IMMUNIZATIONS 1.0000 1.0000 1.0000 1
387
+ LABS 0.0000 0.0000 0.0000 1
388
+ MEDICATIONS 0.8333 1.0000 0.9091 10
389
+ OTHER_HISTORY 0.0000 0.0000 0.0000 3
390
+ PASTMEDICALHX 0.5882 0.7143 0.6452 14
391
+ PASTSURGICAL 1.0000 0.8571 0.9231 7
392
+ PLAN 0.0000 0.0000 0.0000 1
393
+ PROCEDURES 0.0000 0.0000 0.0000 1
394
+ ROS 0.8462 0.6471 0.7333 17
395
+
396
+ accuracy 0.7200 200
397
+ macro avg 0.4684 0.5290 0.4703 200
398
+ weighted avg 0.6675 0.7200 0.6822 200
399
+ |
400
+ | 0.0107 | 13.0 | 2236 | 0.8114 | precision recall f1-score support
401
+
402
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+ | 0.0107 | 14.0 | 2408 | 0.7763 | precision recall f1-score support
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+ |
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+ |
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+ | 0.0024 | 19.0 | 3268 | 0.8372 | precision recall f1-score support
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582
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583
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+
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586
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587
+ weighted avg 0.6618 0.7250 0.6812 200
588
+ |
589
+ | 0.0024 | 20.0 | 3440 | 0.8345 | precision recall f1-score support
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591
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592
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593
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+
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+ weighted avg 0.6618 0.7250 0.6812 200
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+ |
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+
617
+
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+ ### Framework versions
619
+
620
+ - Transformers 4.38.2
621
+ - Pytorch 2.1.0+cu121
622
+ - Datasets 2.18.0
623
+ - Tokenizers 0.15.2
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