model: graph_conv-distmult_h128_l3_edge_prediction | (graph_conv-distmult_h128_l3) | WandB: kjv3q37g
Browse files- wandb_run_info.yaml +55 -0
wandb_run_info.yaml
ADDED
|
@@ -0,0 +1,55 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
run_summaries:
|
| 2 |
+
_runtime: 30211
|
| 3 |
+
_step: 6831
|
| 4 |
+
_timestamp: 1767034491.9456031
|
| 5 |
+
_wandb:
|
| 6 |
+
runtime: 30211
|
| 7 |
+
avg_epoch_duration: 87.94588071403281
|
| 8 |
+
corruption_error: 'supervision_edges shape mismatch: torch.Size([2, 6420899]) !=
|
| 9 |
+
(2, 8621157)'
|
| 10 |
+
corruption_restart: 9
|
| 11 |
+
embeddings/embedding_norm_max: 428.54779052734375
|
| 12 |
+
embeddings/embedding_norm_mean: 53.10097885131836
|
| 13 |
+
embeddings/embedding_norm_median: 47.42254638671875
|
| 14 |
+
embeddings/embedding_norm_std: 21.938392639160156
|
| 15 |
+
epoch: 342
|
| 16 |
+
epoch_duration_seconds: 74.15779519081116
|
| 17 |
+
lr-AdamW: 0.0005
|
| 18 |
+
score_distributions/head_type: distmult
|
| 19 |
+
score_distributions/neg_saturated_pct: 0.030968639999628067
|
| 20 |
+
score_distributions/neg_score_max: 44.55348205566406
|
| 21 |
+
score_distributions/neg_score_mean: -0.826296865940094
|
| 22 |
+
score_distributions/neg_score_min: -19.263683319091797
|
| 23 |
+
score_distributions/neg_score_std: 1.2557003498077393
|
| 24 |
+
score_distributions/pos_saturated_pct: 0.1275368630886078
|
| 25 |
+
score_distributions/pos_score_max: 290.8443908691406
|
| 26 |
+
score_distributions/pos_score_mean: 1.1884087324142456
|
| 27 |
+
score_distributions/pos_score_min: -14.19235134124756
|
| 28 |
+
score_distributions/pos_score_std: 2.724560022354126
|
| 29 |
+
score_distributions/rank_corr_with_dotprod: 0.4860309751053818
|
| 30 |
+
score_distributions/separation_cohens_d: 1.604447841644287
|
| 31 |
+
score_distributions/split: validation
|
| 32 |
+
time_per_epoch_avg: 87.94588071403281
|
| 33 |
+
time_per_epoch_std: 13.457729559284251
|
| 34 |
+
total_epochs_completed: 343
|
| 35 |
+
total_train_time_minutes: 503.24063789844513
|
| 36 |
+
train_loss: 0.03498705103993416
|
| 37 |
+
trainer/global_step: 6859
|
| 38 |
+
val_ap: 0.8281906843185425
|
| 39 |
+
val_auc: 0.8276978731155396
|
| 40 |
+
val_auc_catalyst -> modified: 0.961272656917572
|
| 41 |
+
val_auc_catalyst -> reactant: 0.9886988401412964
|
| 42 |
+
val_auc_inhibitor -> modified: 0.8825477957725525
|
| 43 |
+
val_auc_inhibitor -> reactant: 0.9801532030105592
|
| 44 |
+
val_auc_interactor -> interactor: 0.8197686672210693
|
| 45 |
+
val_auc_modifier -> modified: 0.9591658115386964
|
| 46 |
+
val_auc_other relation: 0.9843050837516784
|
| 47 |
+
val_auc_reactant -> product: 0.9954507350921632
|
| 48 |
+
val_auc_stimulator -> modified: 0.9218089580535888
|
| 49 |
+
val_auc_stimulator -> reactant: 0.9910085797309875
|
| 50 |
+
val_auc_stimulator -> stimulator: 0.8647052645683289
|
| 51 |
+
val_relation_weighted_auc: 0.8644379377365112
|
| 52 |
+
wandb_entity: napistu
|
| 53 |
+
wandb_project: napistu-experiments
|
| 54 |
+
wandb_run_id: kjv3q37g
|
| 55 |
+
run_path: napistu/napistu-experiments/kjv3q37g
|