File size: 10,941 Bytes
9c6961c | 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 | import gradio as gr
import json
import os
import random
import glob
from datetime import datetime
# --- Configuration & Folder Setup ---
DATA_PATH = '/home/mshahidul/readctrl/data/extracting_subclaim/extracted_subclaims_syn_data_with_gs_summary_en.json'
KEY_DATA_PATH = '/home/mshahidul/readctrl/data/key_subclaims_testing/key_subclaims.json'
BASE_SAVE_DIR = '/home/mshahidul/readctrl/data/thresold_finding/'
# --- Data Loading ---
with open(DATA_PATH, 'r') as f:
data = json.load(f)
NUM_SAMPLES = 10
random.seed(42)
all_possible_indices = list(range(len(data)))
shuffled_indices = random.sample(all_possible_indices, min(NUM_SAMPLES, len(data)))
with open(KEY_DATA_PATH, 'r') as f:
key_data = json.load(f)
key_lookup = {item['index']: item['llm_output'] for item in key_data}
# --- Helper Functions ---
def get_user_dir(username):
if not username: return None
safe_name = "".join(x for x in username if x.isalnum()).lower()
user_path = os.path.join(BASE_SAVE_DIR, safe_name)
os.makedirs(user_path, exist_ok=True)
return user_path
def get_last_progress(username):
user_dir = get_user_dir(username)
files = glob.glob(os.path.join(user_dir, "seq*_*.json"))
if not files: return 0
indices = []
for f in files:
try:
indices.append(int(os.path.basename(f).split('_')[0].replace('seq', '')))
except: continue
return min(max(indices) + 1, NUM_SAMPLES - 1) if indices else 0
# --- Core Logic ---
def load_example(progress_index, username):
if not username:
return [gr.update(value="### ⚠️ Please enter your name and click Login")] + [gr.skip()]*10
if progress_index >= len(shuffled_indices):
return ["### 🎉 All Samples Complete!", "Done", [], "0%", "0%", "0%", gr.update(choices=[], value=[]), gr.update(choices=[], value=[]), gr.update(choices=[], value=[]), "Session Finished", progress_index]
actual_data_index = shuffled_indices[progress_index]
record = data[actual_data_index]
random.seed(actual_data_index)
source_type = random.choice(["Full Original Text", "Gold Summary"])
text_content, subclaims = (record['fulltext'], record['fulltext_subclaims']) if source_type == "Full Original Text" else (record['summary'], record['summary_subclaims'])
user_dir = get_user_dir(username)
existing_files = glob.glob(os.path.join(user_dir, f"seq{progress_index}_*.json"))
if existing_files:
with open(existing_files[0], 'r') as f:
saved = json.load(f)
low_val = saved['annotations']['low']['subclaims']
int_val = saved['annotations']['intermediate']['subclaims']
prof_val = saved['annotations']['proficient']['subclaims']
status_msg = f"📂 [Sequence {progress_index}] Previously saved data loaded."
else:
key_items = key_lookup.get(actual_data_index, {}).get('key_source_text_subclaims' if source_type == "Full Original Text" else 'key_gold_summary_subclaims', [])
indices = []
for item in key_items:
try: indices.append(int(item.get("source_subclaim_id" if source_type == "Full Original Text" else "gold_subclaim_id", "").split('-')[-1]))
except: continue
default_sel = [subclaims[i] for i in indices if 0 <= i < len(subclaims)]
low_val, int_val, prof_val = default_sel, default_sel, default_sel
status_msg = f"🆕 [Sequence {progress_index}] New record loaded."
source_info = f"### Instance: {progress_index + 1}/{len(shuffled_indices)} | User: **{username}** | Source: **{source_type}**"
# Calculate initial percentages for UI
total = len(subclaims) if subclaims else 1
l_p, i_p, p_p = f"{(len(low_val)/total*100):.1f}%", f"{(len(int_val)/total*100):.1f}%", f"{(len(prof_val)/total*100):.1f}%"
return [
source_info, text_content, subclaims, l_p, i_p, p_p,
gr.update(choices=subclaims, value=low_val),
gr.update(choices=subclaims, value=int_val),
gr.update(choices=subclaims, value=prof_val),
status_msg, progress_index
]
def handle_save(username, progress_index, source_info, low_sel, int_sel, prof_sel, subclaims):
if not username or username.strip() == "":
gr.Warning("User name missing! Please enter name.")
return "❌ Error: Username Required"
if not (len(low_sel) <= len(int_sel) <= len(prof_sel)):
gr.Warning("Hierarchy Error: Selections must follow Low ⊆ Intermediate ⊆ Proficient.")
return "❌ Save Failed: Hierarchy Violation"
user_dir = get_user_dir(username)
actual_data_index = shuffled_indices[progress_index]
stype = "Full Original Text" if "Full Original Text" in source_info else "Gold Summary"
# Calculate Percentages for saving
total_count = len(subclaims) if subclaims else 1
low_pct_val = (len(low_sel) / total_count) * 100
int_pct_val = (len(int_sel) / total_count) * 100
prof_pct_val = (len(prof_sel) / total_count) * 100
result = {
"annotator": username,
"timestamp": datetime.now().strftime("%Y-%m-%d %H:%M:%S"),
"progress_sequence": progress_index,
"original_data_index": actual_data_index,
"source_type": stype,
"total_subclaims": total_count,
"annotations": {
"low": {
"count": len(low_sel),
"percentage": f"{low_pct_val:.2f}%",
"subclaims": low_sel
},
"intermediate": {
"count": len(int_sel),
"percentage": f"{int_pct_val:.2f}%",
"subclaims": int_sel
},
"proficient": {
"count": len(prof_sel),
"percentage": f"{prof_pct_val:.2f}%",
"subclaims": prof_sel
}
}
}
filename = f"seq{progress_index}_record{actual_data_index}.json"
file_path = os.path.join(user_dir, filename)
with open(file_path, 'w') as f:
json.dump(result, f, indent=4)
gr.Info(f"Record {progress_index + 1} saved successfully!")
return f"✅ Last saved: {datetime.now().strftime('%H:%M:%S')}"
def navigate(direction, current_idx):
return max(0, min(current_idx + direction, NUM_SAMPLES - 1))
def sync_logic(low, inter, prof, total, trigger_type):
if trigger_type == "low":
inter, prof = list(set(inter) | set(low)), list(set(prof) | set(inter) | set(low))
elif trigger_type == "inter":
prof, low = list(set(prof) | set(inter)), list(set(low) & set(inter))
else:
inter, low = list(set(inter) & set(prof)), list(set(low) & set(inter) & set(prof))
calc_pct = lambda x: f"{(len(x)/len(total)*100):.1f}%" if total else "0%"
return calc_pct(low), calc_pct(inter), calc_pct(prof), gr.update(value=low), gr.update(value=inter), gr.update(value=prof)
# --- UI Definition ---
with gr.Blocks(theme=gr.themes.Soft(), title="Medical Literacy Tool") as demo:
index_state = gr.State(0)
subclaim_list_state = gr.State([])
with gr.Row():
with gr.Column(scale=2):
user_input = gr.Textbox(label="Annotator Name", placeholder="e.g., Shahidul", interactive=True)
load_btn = gr.Button("🚀 Login / Resume Session", variant="primary")
with gr.Column(scale=3):
with gr.Accordion("📖 View Task Instructions", open=False):
try:
with open("/home/mshahidul/readctrl/code/interface/instructions", "r") as f:
gr.Markdown(f.read())
except:
gr.Markdown("### Instructions\n- Adjust subclaims for literacy levels.\n- **Saving:** Overwrites previous edits for the same record.")
gr.HTML("<hr>")
with gr.Row():
with gr.Column(scale=1, variant="panel"):
source_display = gr.Markdown("### Please login to begin.")
progress_bar = gr.Slider(label="Progress", minimum=0, maximum=NUM_SAMPLES-1, step=1, interactive=False)
text_viewer = gr.Textbox(label="Reference Text", interactive=False, lines=18)
save_status = gr.Markdown("Status: Waiting for login...")
with gr.Column(scale=2):
with gr.Row():
with gr.Column():
gr.Markdown("### 🟢 Low")
low_pct = gr.Label(label="Coverage", value="0%")
low_check = gr.CheckboxGroup(label="Subclaims", choices=[])
with gr.Column():
gr.Markdown("### 🟡 Intermediate")
int_pct = gr.Label(label="Coverage", value="0%")
int_check = gr.CheckboxGroup(label="Subclaims", choices=[])
with gr.Column():
gr.Markdown("### 🔴 Proficient")
prof_pct = gr.Label(label="Coverage", value="0%")
prof_check = gr.CheckboxGroup(label="Subclaims", choices=[])
with gr.Row():
prev_btn = gr.Button("⬅️ Previous")
save_btn = gr.Button("💾 Save Changes", variant="primary")
next_btn = gr.Button("Next ➡️")
# --- Event Handlers ---
load_btn.click(lambda u: (get_last_progress(u), f"Session for {u} active."), [user_input], [index_state, save_status]).then(
load_example, [index_state, user_input],
[source_display, text_viewer, subclaim_list_state, low_pct, int_pct, prof_pct, low_check, int_check, prof_check, save_status, progress_bar]
)
save_btn.click(handle_save, [user_input, index_state, source_display, low_check, int_check, prof_check, subclaim_list_state], [save_status])
next_btn.click(navigate, [gr.Number(1, visible=False), index_state], [index_state]).then(
load_example, [index_state, user_input],
[source_display, text_viewer, subclaim_list_state, low_pct, int_pct, prof_pct, low_check, int_check, prof_check, save_status, progress_bar]
)
prev_btn.click(navigate, [gr.Number(-1, visible=False), index_state], [index_state]).then(
load_example, [index_state, user_input],
[source_display, text_viewer, subclaim_list_state, low_pct, int_pct, prof_pct, low_check, int_check, prof_check, save_status, progress_bar]
)
# Sync Logic for Hierarchy
low_check.input(lambda l,i,p,t: sync_logic(l,i,p,t,"low"), [low_check, int_check, prof_check, subclaim_list_state], [low_pct, int_pct, prof_pct, low_check, int_check, prof_check])
int_check.input(lambda l,i,p,t: sync_logic(l,i,p,t,"inter"), [low_check, int_check, prof_check, subclaim_list_state], [low_pct, int_pct, prof_pct, low_check, int_check, prof_check])
prof_check.input(lambda l,i,p,t: sync_logic(l,i,p,t,"prof"), [low_check, int_check, prof_check, subclaim_list_state], [low_pct, int_pct, prof_pct, low_check, int_check, prof_check])
if __name__ == "__main__":
demo.launch(share=True) |