relevance_model/model.py

import torch
from torch import nn
from transformers import AutoModel, PreTrainedModel, AutoConfig

class BERTDiseaseClassifier(nn.Module):
    def __init__(self, model_type, num_symps) -> None:
        super().__init__()
        self.model_type = model_type
        self.num_symps = num_symps
        # multi-label binary classification
        self.encoder = AutoModel.from_pretrained(model_type)
        self.dropout = nn.Dropout(self.encoder.config.hidden_dropout_prob)
        self.clf = nn.Linear(self.encoder.config.hidden_size, num_symps)
    
    def forward(self, input_ids=None, attention_mask=None, token_type_ids=None, **kwargs):
        outputs = self.encoder(input_ids, attention_mask, token_type_ids)
        x = outputs.last_hidden_state[:, 0, :]   # [CLS] pooling
        x = self.dropout(x)
        logits = self.clf(x)
        return logits