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shivendrra
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BiosaicTokenizer

English
biology
alphafold
bio-compute
Model card Files
xet
Community
shivendrra commited on
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1 Parent(s): 84ae784

uploading updated vocabs

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Files changed (34) hide show
  1. vocab/as_json/base_1k.json +11 -0
  2. vocab/as_json/base_2k.json +36 -0
  3. vocab/as_json/base_3k.json +161 -0
  4. vocab/as_json/base_4k.json +786 -0
  5. vocab/as_json/base_5k.json +3911 -0
  6. vocab/as_json/cont_1k.json +11 -0
  7. vocab/as_json/cont_2k.json +31 -0
  8. vocab/as_json/cont_3k.json +131 -0
  9. vocab/as_json/cont_4k.json +631 -0
  10. vocab/as_json/cont_5k.json +3131 -0
  11. vocab/dna/base_1k.model +3 -0
  12. vocab/dna/base_2k.model +3 -0
  13. vocab/dna/base_3k.model +3 -0
  14. vocab/dna/base_4k.model +3 -0
  15. vocab/dna/base_5k.model +3 -0
  16. vocab/dna/base_6k.model +3 -0
  17. vocab/dna/base_7k.model +3 -0
  18. vocab/dna/base_8k.model +3 -0
  19. vocab/dna/cont_1k.model +3 -0
  20. vocab/dna/cont_2k.model +3 -0
  21. vocab/dna/cont_3k.model +3 -0
  22. vocab/dna/cont_4k.model +3 -0
  23. vocab/dna/cont_5k.model +3 -0
  24. vocab/dna/cont_6k.model +3 -0
  25. vocab/dna/cont_7k.model +3 -0
  26. vocab/dna/cont_8k.model +3 -0
  27. vocab/protein/base_1k.model +3 -0
  28. vocab/protein/base_2k.model +3 -0
  29. vocab/protein/base_3k.model +3 -0
  30. vocab/protein/base_4k.model +3 -0
  31. vocab/protein/cont_1k.model +3 -0
  32. vocab/protein/cont_2k.model +3 -0
  33. vocab/protein/cont_3k.model +3 -0
  34. vocab/protein/cont_4k.model +3 -0
vocab/as_json/base_1k.json ADDED
@@ -0,0 +1,11 @@
 
 
 
 
 
 
 
 
 
 
 
 
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+ {
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+ "kmer": 1,
3
+ "vocab_size": 5,
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+ "trained_vocab": {
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+ "-": 0,
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+ "A": 1,
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+ "C": 2,
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+ "G": 3,
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+ "T": 4
10
+ }
11
+ }
vocab/as_json/base_2k.json ADDED
@@ -0,0 +1,36 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
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+ {
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+ "kmer": 2,
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+ "vocab_size": 30,
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+ "trained_vocab": {
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+ "-": 0,
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+ "A": 1,
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+ "C": 2,
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+ "G": 3,
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+ "T": 4,
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+ "--": 5,
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+ "-A": 6,
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+ "-C": 7,
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+ "-G": 8,
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+ "-T": 9,
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+ "AA": 11,
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+ "AC": 12,
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+ "AG": 13,
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+ "AT": 14,
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+ "C-": 15,
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+ "CA": 16,
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+ "CC": 17,
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+ "CG": 18,
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+ "CT": 19,
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+ "G-": 20,
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+ "GA": 21,
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+ "GC": 22,
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+ "GG": 23,
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+ "GT": 24,
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+ "T-": 25,
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+ "TA": 26,
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+ "TC": 27,
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+ "TG": 28,
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+ "TT": 29
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+ }
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+ }
vocab/as_json/base_3k.json ADDED
@@ -0,0 +1,161 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
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+ {
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+ "trained_vocab": {
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+ "--": 5,
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+ "---": 30,
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+ "--A": 31,
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+ "AGT": 74,
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+ "ATA": 76,
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+ "ATC": 77,
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+ "ATG": 78,
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+ "ATT": 79,
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+ "C--": 80,
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+ "CAC": 87,
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+ "CAG": 88,
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+ "CAT": 89,
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+ "CCA": 91,
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+ "CCT": 94,
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+ "CG-": 95,
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+ "CGC": 97,
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+ "CTT": 104,
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+ "G--": 105,
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+ "G-G": 108,
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+ "G-T": 109,
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+ "GA-": 110,
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+ "GAA": 111,
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+ "GAC": 112,
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+ "GAG": 113,
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+ "GAT": 114,
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+ "GC-": 115,
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+ "GCA": 116,
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+ "GCC": 117,
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+ "GCG": 118,
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+ "GCT": 119,
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+ "GG-": 120,
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+ "GGA": 121,
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+ "GGC": 122,
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+ "GGG": 123,
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+ "GGT": 124,
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+ "GT-": 125,
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+ "GTA": 126,
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+ "GTC": 127,
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+ "GTG": 128,
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+ "GTT": 129,
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+ "TTG": 153,
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+ "TTT": 154
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+ }
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+ }
vocab/as_json/base_4k.json ADDED
@@ -0,0 +1,786 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
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+ {
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+ "AAGC": 322,
328
+ "AAGG": 323,
329
+ "AAGT": 324,
330
+ "AAT-": 325,
331
+ "AATA": 326,
332
+ "AATC": 327,
333
+ "AATG": 328,
334
+ "AATT": 329,
335
+ "AC--": 330,
336
+ "AC-A": 331,
337
+ "AC-C": 332,
338
+ "AC-G": 333,
339
+ "AC-T": 334,
340
+ "ACA-": 335,
341
+ "ACAA": 336,
342
+ "ACAC": 337,
343
+ "ACAG": 338,
344
+ "ACAT": 339,
345
+ "ACC-": 340,
346
+ "ACCA": 341,
347
+ "ACCC": 342,
348
+ "ACCG": 343,
349
+ "ACCT": 344,
350
+ "ACG-": 345,
351
+ "ACGA": 346,
352
+ "ACGC": 347,
353
+ "ACGG": 348,
354
+ "ACGT": 349,
355
+ "ACT-": 350,
356
+ "ACTA": 351,
357
+ "ACTC": 352,
358
+ "ACTG": 353,
359
+ "ACTT": 354,
360
+ "AG--": 355,
361
+ "AG-A": 356,
362
+ "AG-C": 357,
363
+ "AG-G": 358,
364
+ "AG-T": 359,
365
+ "AGA-": 360,
366
+ "AGAA": 361,
367
+ "AGAC": 362,
368
+ "AGAG": 363,
369
+ "AGAT": 364,
370
+ "AGC-": 365,
371
+ "AGCA": 366,
372
+ "AGCC": 367,
373
+ "AGCG": 368,
374
+ "AGCT": 369,
375
+ "AGG-": 370,
376
+ "AGGA": 371,
377
+ "AGGC": 372,
378
+ "AGGG": 373,
379
+ "AGGT": 374,
380
+ "AGT-": 375,
381
+ "AGTA": 376,
382
+ "AGTC": 377,
383
+ "AGTG": 378,
384
+ "AGTT": 379,
385
+ "AT--": 380,
386
+ "AT-A": 381,
387
+ "AT-C": 382,
388
+ "AT-G": 383,
389
+ "AT-T": 384,
390
+ "ATA-": 385,
391
+ "ATAA": 386,
392
+ "ATAC": 387,
393
+ "ATAG": 388,
394
+ "ATAT": 389,
395
+ "ATC-": 390,
396
+ "ATCA": 391,
397
+ "ATCC": 392,
398
+ "ATCG": 393,
399
+ "ATCT": 394,
400
+ "ATG-": 395,
401
+ "ATGA": 396,
402
+ "ATGC": 397,
403
+ "ATGG": 398,
404
+ "ATGT": 399,
405
+ "ATT-": 400,
406
+ "ATTA": 401,
407
+ "ATTC": 402,
408
+ "ATTG": 403,
409
+ "ATTT": 404,
410
+ "C---": 405,
411
+ "C--A": 406,
412
+ "C--C": 407,
413
+ "C--G": 408,
414
+ "C--T": 409,
415
+ "C-A-": 410,
416
+ "C-AA": 411,
417
+ "C-AC": 412,
418
+ "C-AG": 413,
419
+ "C-AT": 414,
420
+ "C-C-": 415,
421
+ "C-CA": 416,
422
+ "C-CC": 417,
423
+ "C-CG": 418,
424
+ "C-CT": 419,
425
+ "C-G-": 420,
426
+ "C-GA": 421,
427
+ "C-GC": 422,
428
+ "C-GG": 423,
429
+ "C-GT": 424,
430
+ "C-T-": 425,
431
+ "C-TA": 426,
432
+ "C-TC": 427,
433
+ "C-TG": 428,
434
+ "C-TT": 429,
435
+ "CA--": 430,
436
+ "CA-A": 431,
437
+ "CA-C": 432,
438
+ "CA-G": 433,
439
+ "CA-T": 434,
440
+ "CAA-": 435,
441
+ "CAAA": 436,
442
+ "CAAC": 437,
443
+ "CAAG": 438,
444
+ "CAAT": 439,
445
+ "CAC-": 440,
446
+ "CACA": 441,
447
+ "CACC": 442,
448
+ "CACG": 443,
449
+ "CACT": 444,
450
+ "CAG-": 445,
451
+ "CAGA": 446,
452
+ "CAGC": 447,
453
+ "CAGG": 448,
454
+ "CAGT": 449,
455
+ "CAT-": 450,
456
+ "CATA": 451,
457
+ "CATC": 452,
458
+ "CATG": 453,
459
+ "CATT": 454,
460
+ "CC--": 455,
461
+ "CC-A": 456,
462
+ "CC-C": 457,
463
+ "CC-G": 458,
464
+ "CC-T": 459,
465
+ "CCA-": 460,
466
+ "CCAA": 461,
467
+ "CCAC": 462,
468
+ "CCAG": 463,
469
+ "CCAT": 464,
470
+ "CCC-": 465,
471
+ "CCCA": 466,
472
+ "CCCC": 467,
473
+ "CCCG": 468,
474
+ "CCCT": 469,
475
+ "CCG-": 470,
476
+ "CCGA": 471,
477
+ "CCGC": 472,
478
+ "CCGG": 473,
479
+ "CCGT": 474,
480
+ "CCT-": 475,
481
+ "CCTA": 476,
482
+ "CCTC": 477,
483
+ "CCTG": 478,
484
+ "CCTT": 479,
485
+ "CG--": 480,
486
+ "CG-A": 481,
487
+ "CG-C": 482,
488
+ "CG-G": 483,
489
+ "CG-T": 484,
490
+ "CGA-": 485,
491
+ "CGAA": 486,
492
+ "CGAC": 487,
493
+ "CGAG": 488,
494
+ "CGAT": 489,
495
+ "CGC-": 490,
496
+ "CGCA": 491,
497
+ "CGCC": 492,
498
+ "CGCG": 493,
499
+ "CGCT": 494,
500
+ "CGG-": 495,
501
+ "CGGA": 496,
502
+ "CGGC": 497,
503
+ "CGGG": 498,
504
+ "CGGT": 499,
505
+ "CGT-": 500,
506
+ "CGTA": 501,
507
+ "CGTC": 502,
508
+ "CGTG": 503,
509
+ "CGTT": 504,
510
+ "CT--": 505,
511
+ "CT-A": 506,
512
+ "CT-C": 507,
513
+ "CT-G": 508,
514
+ "CT-T": 509,
515
+ "CTA-": 510,
516
+ "CTAA": 511,
517
+ "CTAC": 512,
518
+ "CTAG": 513,
519
+ "CTAT": 514,
520
+ "CTC-": 515,
521
+ "CTCA": 516,
522
+ "CTCC": 517,
523
+ "CTCG": 518,
524
+ "CTCT": 519,
525
+ "CTG-": 520,
526
+ "CTGA": 521,
527
+ "CTGC": 522,
528
+ "CTGG": 523,
529
+ "CTGT": 524,
530
+ "CTT-": 525,
531
+ "CTTA": 526,
532
+ "CTTC": 527,
533
+ "CTTG": 528,
534
+ "CTTT": 529,
535
+ "G---": 530,
536
+ "G--A": 531,
537
+ "G--C": 532,
538
+ "G--G": 533,
539
+ "G--T": 534,
540
+ "G-A-": 535,
541
+ "G-AA": 536,
542
+ "G-AC": 537,
543
+ "G-AG": 538,
544
+ "G-AT": 539,
545
+ "G-C-": 540,
546
+ "G-CA": 541,
547
+ "G-CC": 542,
548
+ "G-CG": 543,
549
+ "G-CT": 544,
550
+ "G-G-": 545,
551
+ "G-GA": 546,
552
+ "G-GC": 547,
553
+ "G-GG": 548,
554
+ "G-GT": 549,
555
+ "G-T-": 550,
556
+ "G-TA": 551,
557
+ "G-TC": 552,
558
+ "G-TG": 553,
559
+ "G-TT": 554,
560
+ "GA--": 555,
561
+ "GA-A": 556,
562
+ "GA-C": 557,
563
+ "GA-G": 558,
564
+ "GA-T": 559,
565
+ "GAA-": 560,
566
+ "GAAA": 561,
567
+ "GAAC": 562,
568
+ "GAAG": 563,
569
+ "GAAT": 564,
570
+ "GAC-": 565,
571
+ "GACA": 566,
572
+ "GACC": 567,
573
+ "GACG": 568,
574
+ "GACT": 569,
575
+ "GAG-": 570,
576
+ "GAGA": 571,
577
+ "GAGC": 572,
578
+ "GAGG": 573,
579
+ "GAGT": 574,
580
+ "GAT-": 575,
581
+ "GATA": 576,
582
+ "GATC": 577,
583
+ "GATG": 578,
584
+ "GATT": 579,
585
+ "GC--": 580,
586
+ "GC-A": 581,
587
+ "GC-C": 582,
588
+ "GC-G": 583,
589
+ "GC-T": 584,
590
+ "GCA-": 585,
591
+ "GCAA": 586,
592
+ "GCAC": 587,
593
+ "GCAG": 588,
594
+ "GCAT": 589,
595
+ "GCC-": 590,
596
+ "GCCA": 591,
597
+ "GCCC": 592,
598
+ "GCCG": 593,
599
+ "GCCT": 594,
600
+ "GCG-": 595,
601
+ "GCGA": 596,
602
+ "GCGC": 597,
603
+ "GCGG": 598,
604
+ "GCGT": 599,
605
+ "GCT-": 600,
606
+ "GCTA": 601,
607
+ "GCTC": 602,
608
+ "GCTG": 603,
609
+ "GCTT": 604,
610
+ "GG--": 605,
611
+ "GG-A": 606,
612
+ "GG-C": 607,
613
+ "GG-G": 608,
614
+ "GG-T": 609,
615
+ "GGA-": 610,
616
+ "GGAA": 611,
617
+ "GGAC": 612,
618
+ "GGAG": 613,
619
+ "GGAT": 614,
620
+ "GGC-": 615,
621
+ "GGCA": 616,
622
+ "GGCC": 617,
623
+ "GGCG": 618,
624
+ "GGCT": 619,
625
+ "GGG-": 620,
626
+ "GGGA": 621,
627
+ "GGGC": 622,
628
+ "GGGG": 623,
629
+ "GGGT": 624,
630
+ "GGT-": 625,
631
+ "GGTA": 626,
632
+ "GGTC": 627,
633
+ "GGTG": 628,
634
+ "GGTT": 629,
635
+ "GT--": 630,
636
+ "GT-A": 631,
637
+ "GT-C": 632,
638
+ "GT-G": 633,
639
+ "GT-T": 634,
640
+ "GTA-": 635,
641
+ "GTAA": 636,
642
+ "GTAC": 637,
643
+ "GTAG": 638,
644
+ "GTAT": 639,
645
+ "GTC-": 640,
646
+ "GTCA": 641,
647
+ "GTCC": 642,
648
+ "GTCG": 643,
649
+ "GTCT": 644,
650
+ "GTG-": 645,
651
+ "GTGA": 646,
652
+ "GTGC": 647,
653
+ "GTGG": 648,
654
+ "GTGT": 649,
655
+ "GTT-": 650,
656
+ "GTTA": 651,
657
+ "GTTC": 652,
658
+ "GTTG": 653,
659
+ "GTTT": 654,
660
+ "T---": 655,
661
+ "T--A": 656,
662
+ "T--C": 657,
663
+ "T--G": 658,
664
+ "T--T": 659,
665
+ "T-A-": 660,
666
+ "T-AA": 661,
667
+ "T-AC": 662,
668
+ "T-AG": 663,
669
+ "T-AT": 664,
670
+ "T-C-": 665,
671
+ "T-CA": 666,
672
+ "T-CC": 667,
673
+ "T-CG": 668,
674
+ "T-CT": 669,
675
+ "T-G-": 670,
676
+ "T-GA": 671,
677
+ "T-GC": 672,
678
+ "T-GG": 673,
679
+ "T-GT": 674,
680
+ "T-T-": 675,
681
+ "T-TA": 676,
682
+ "T-TC": 677,
683
+ "T-TG": 678,
684
+ "T-TT": 679,
685
+ "TA--": 680,
686
+ "TA-A": 681,
687
+ "TA-C": 682,
688
+ "TA-G": 683,
689
+ "TA-T": 684,
690
+ "TAA-": 685,
691
+ "TAAA": 686,
692
+ "TAAC": 687,
693
+ "TAAG": 688,
694
+ "TAAT": 689,
695
+ "TAC-": 690,
696
+ "TACA": 691,
697
+ "TACC": 692,
698
+ "TACG": 693,
699
+ "TACT": 694,
700
+ "TAG-": 695,
701
+ "TAGA": 696,
702
+ "TAGC": 697,
703
+ "TAGG": 698,
704
+ "TAGT": 699,
705
+ "TAT-": 700,
706
+ "TATA": 701,
707
+ "TATC": 702,
708
+ "TATG": 703,
709
+ "TATT": 704,
710
+ "TC--": 705,
711
+ "TC-A": 706,
712
+ "TC-C": 707,
713
+ "TC-G": 708,
714
+ "TC-T": 709,
715
+ "TCA-": 710,
716
+ "TCAA": 711,
717
+ "TCAC": 712,
718
+ "TCAG": 713,
719
+ "TCAT": 714,
720
+ "TCC-": 715,
721
+ "TCCA": 716,
722
+ "TCCC": 717,
723
+ "TCCG": 718,
724
+ "TCCT": 719,
725
+ "TCG-": 720,
726
+ "TCGA": 721,
727
+ "TCGC": 722,
728
+ "TCGG": 723,
729
+ "TCGT": 724,
730
+ "TCT-": 725,
731
+ "TCTA": 726,
732
+ "TCTC": 727,
733
+ "TCTG": 728,
734
+ "TCTT": 729,
735
+ "TG--": 730,
736
+ "TG-A": 731,
737
+ "TG-C": 732,
738
+ "TG-G": 733,
739
+ "TG-T": 734,
740
+ "TGA-": 735,
741
+ "TGAA": 736,
742
+ "TGAC": 737,
743
+ "TGAG": 738,
744
+ "TGAT": 739,
745
+ "TGC-": 740,
746
+ "TGCA": 741,
747
+ "TGCC": 742,
748
+ "TGCG": 743,
749
+ "TGCT": 744,
750
+ "TGG-": 745,
751
+ "TGGA": 746,
752
+ "TGGC": 747,
753
+ "TGGG": 748,
754
+ "TGGT": 749,
755
+ "TGT-": 750,
756
+ "TGTA": 751,
757
+ "TGTC": 752,
758
+ "TGTG": 753,
759
+ "TGTT": 754,
760
+ "TT--": 755,
761
+ "TT-A": 756,
762
+ "TT-C": 757,
763
+ "TT-G": 758,
764
+ "TT-T": 759,
765
+ "TTA-": 760,
766
+ "TTAA": 761,
767
+ "TTAC": 762,
768
+ "TTAG": 763,
769
+ "TTAT": 764,
770
+ "TTC-": 765,
771
+ "TTCA": 766,
772
+ "TTCC": 767,
773
+ "TTCG": 768,
774
+ "TTCT": 769,
775
+ "TTG-": 770,
776
+ "TTGA": 771,
777
+ "TTGC": 772,
778
+ "TTGG": 773,
779
+ "TTGT": 774,
780
+ "TTT-": 775,
781
+ "TTTA": 776,
782
+ "TTTC": 777,
783
+ "TTTG": 778,
784
+ "TTTT": 779
785
+ }
786
+ }
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+ "TGGTA": 3751,
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+ "TTGCC": 3867,
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+ "TTGG-": 3870,
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+ "TTGGT": 3874,
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3908
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3909
+ "TTTTT": 3904
3910
+ }
3911
+ }
vocab/as_json/cont_1k.json ADDED
@@ -0,0 +1,11 @@
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "kmer": 1,
3
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4
+ "trained_vocab": {
5
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6
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7
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8
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9
+ "T": 4
10
+ }
11
+ }
vocab/as_json/cont_2k.json ADDED
@@ -0,0 +1,31 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "kmer": 2,
3
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6
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23
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25
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26
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27
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28
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29
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30
+ }
31
+ }
vocab/as_json/cont_3k.json ADDED
@@ -0,0 +1,131 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
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39
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54
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55
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56
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57
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58
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59
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60
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61
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127
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129
+ "TTT": 124
130
+ }
131
+ }
vocab/as_json/cont_4k.json ADDED
@@ -0,0 +1,631 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
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6
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7
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20
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22
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23
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27
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33
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34
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35
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36
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37
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38
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39
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40
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41
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42
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43
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44
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46
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48
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51
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52
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53
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54
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55
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56
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57
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58
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62
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64
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65
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66
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67
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72
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95
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97
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2744
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2802
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2803
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2804
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2819
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2820
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2825
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2834
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2842
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2847
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2850
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2851
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2852
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2853
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2854
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2857
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2859
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2922
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2923
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2924
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2925
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2926
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2930
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2945
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2947
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2948
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2950
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2952
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2953
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2954
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2956
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2957
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2959
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2962
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2968
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2969
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2970
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2972
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2973
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2974
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2975
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2976
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2977
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2978
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2995
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2997
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2998
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3020
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3022
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3034
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3036
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3044
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3045
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3046
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3047
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3048
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3049
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3050
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3051
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3052
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3053
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3054
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3055
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3056
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3058
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3059
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3060
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3061
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3062
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3063
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3064
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3065
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3066
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3067
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3068
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3069
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3070
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3071
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3072
+ "TTCGC": 3067,
3073
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3074
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3075
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3076
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3077
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3078
+ "TTCTG": 3073,
3079
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3080
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3081
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3082
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3083
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3084
+ "TTG-T": 3079,
3085
+ "TTGA-": 3080,
3086
+ "TTGAA": 3081,
3087
+ "TTGAC": 3082,
3088
+ "TTGAG": 3083,
3089
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3090
+ "TTGC-": 3085,
3091
+ "TTGCA": 3086,
3092
+ "TTGCC": 3087,
3093
+ "TTGCG": 3088,
3094
+ "TTGCT": 3089,
3095
+ "TTGG-": 3090,
3096
+ "TTGGA": 3091,
3097
+ "TTGGC": 3092,
3098
+ "TTGGG": 3093,
3099
+ "TTGGT": 3094,
3100
+ "TTGT-": 3095,
3101
+ "TTGTA": 3096,
3102
+ "TTGTC": 3097,
3103
+ "TTGTG": 3098,
3104
+ "TTGTT": 3099,
3105
+ "TTT--": 3100,
3106
+ "TTT-A": 3101,
3107
+ "TTT-C": 3102,
3108
+ "TTT-G": 3103,
3109
+ "TTT-T": 3104,
3110
+ "TTTA-": 3105,
3111
+ "TTTAA": 3106,
3112
+ "TTTAC": 3107,
3113
+ "TTTAG": 3108,
3114
+ "TTTAT": 3109,
3115
+ "TTTC-": 3110,
3116
+ "TTTCA": 3111,
3117
+ "TTTCC": 3112,
3118
+ "TTTCG": 3113,
3119
+ "TTTCT": 3114,
3120
+ "TTTG-": 3115,
3121
+ "TTTGA": 3116,
3122
+ "TTTGC": 3117,
3123
+ "TTTGG": 3118,
3124
+ "TTTGT": 3119,
3125
+ "TTTT-": 3120,
3126
+ "TTTTA": 3121,
3127
+ "TTTTC": 3122,
3128
+ "TTTTG": 3123,
3129
+ "TTTTT": 3124
3130
+ }
3131
+ }
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