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@@ -194,7 +194,65 @@ state = torch.load(ckpt_path, map_location="cpu") # change to cuda as needed
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  - File not found
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  Double check the exact filename on the Hub. Filenames are long. Copy and paste.
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- ## 9. Repro tip for papers and reviews
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
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  Record the exact commit of the code and the model snapshot. Example:
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@@ -205,7 +263,7 @@ HLA: B5101
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  Encoding: epitope
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  ```
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- ## 10. License and citation
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  [arxiv.org/abs/2507.13077](https://arxiv.org/pdf/2507.13077v1)
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  - File not found
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  Double check the exact filename on the Hub. Filenames are long. Copy and paste.
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+ ## 9. Models
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+
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+ | HLA | Model checkpoint |
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+ |-------|------------------|
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+ | B5101 | `ESMCBA_epitope_0.5_20_ESMMASK_epitope_FT_15_0.0001_1e-05_AUG_6_HLAB5101_5_0.001_1e-06__3_B5101_Hubber_B5101_final.pth` |
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+ | A0206 | `ESMCBA_epitope_0.5_20_ESMMASK_epitope_FT_25_0.0001_1e-06_AUG_1_HLAA0206_2_0.001_1e-06__1_A0206_Hubber_A0206_final.pth` |
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+ | B3701 | `ESMCBA_epitope_0.5_20_ESMMASK_epitope_FT_25_0.001_1e-06_AUG_3_HLAB3701_1_0.0001_1e-05__1_B3701_0404_Hubber_B3701_final.pth` |
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+ | B5301 | `ESMCBA_epitope_0.5_30_ESMMASK_epitope_FT_15_0.001_1e-06_AUG_6_HLAB5301_1_0.0001_1e-05__1_B5301_0404_Hubber_B5301_final.pth` |
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+ | A2402 | `ESMCBA_epitope_0.5_30_ESMMASK_epitope_FT_20_0.001_1e-06_AUG_1_HLAA2402_1_0.0001_1e-06__2_A2402_0404_Hubber_A2402_final.pth` |
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+ | C0802 | `ESMCBA_epitope_0.5_30_ESMMASK_epitope_FT_20_0.001_5e-05_AUG_1_HLAC0802_2_0.0001_1e-05__2_C0802_0404_Hubber_C0802_final.pth` |
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+ | A0301 | `ESMCBA_epitope_0.5_30_ESMMASK_epitope_FT_25_0.001_0.001_AUG_1_HLAA0301_1_0.001_1e-06__1_A0301_Hubber_A0301_final.pth` |
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+ | B3501 | `ESMCBA_epitope_0.5_30_ESMMASK_epitope_FT_25_0.001_1e-06_AUG_6_HLAB3501_2_0.001_0.001__4_B3501_Hubber_B3501_final.pth` |
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+ | C1502 | `ESMCBA_epitope_0.5_30_ESMMASK_epitope_FT_25_0.001_5e-05_AUG_3_HLAC1502_2_0.0001_1e-06__1_C1502_0404_Hubber_C1502_final.pth` |
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+ | B4601 | `ESMCBA_epitope_0.8_20_ESMMASK_epitope_FT_15_0.001_1e-06_AUG_6_HLAB4601_1_0.0001_1e-05__2_B4601_0404_Hubber_B4601_final.pth` |
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+ | C0501 | `ESMCBA_epitope_0.8_20_ESMMASK_epitope_FT_15_0.001_1e-06_AUG_6_HLAC0501_2_0.0001_1e-06__2_C0501_0404_Hubber_C0501_final.pth` |
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+ | A3201 | `ESMCBA_epitope_0.8_20_ESMMASK_epitope_FT_15_0.001_5e-05_AUG_1_HLAA3201_2_0.0001_1e-06__1_A3201_0404_Hubber_A3201_final.pth` |
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+ | A0205 | `ESMCBA_epitope_0.8_20_ESMMASK_epitope_FT_15_0.001_5e-05_AUG_3_HLAA0205_2_0.0001_1e-06__2_A0205_0404_Hubber_A0205_final.pth` |
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+ | A3001 | `ESMCBA_epitope_0.8_20_ESMMASK_epitope_FT_25_0.0001_1e-06_AUG_3_HLAA3001_4_0.0001_0.001__3_A3001_Hubber_A3001_final.pth` |
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+ | A0101 | `ESMCBA_epitope_0.8_20_ESMMASK_epitope_FT_25_0.001_1e-05_AUG_6_HLAA0101_2_0.001_0.001__3_A0101_Hubber_A0101_final.pth` |
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+ | C1203 | `ESMCBA_epitope_0.8_20_ESMMASK_epitope_FT_25_0.001_1e-06_AUG_1_HLAC1203_1_0.0001_1e-05__2_C1203_0404_Hubber_C1203_final.pth` |
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+ | A0207 | `ESMCBA_epitope_0.8_20_ESMMASK_epitope_FT_25_0.001_1e-06_AUG_3_HLAA0207_1_0.0001_1e-06__2_A0207_0404_Hubber_A0207_final.pth` |
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+ | A0211 | `ESMCBA_epitope_0.8_20_ESMMASK_epitope_FT_25_0.001_1e-06_AUG_6_HLAA0211_2_0.0001_1e-06__1_A0211_0404_Hubber_A0211_final.pth` |
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+ | B5801 | `ESMCBA_epitope_0.8_20_ESMMASK_epitope_FT_25_0.001_1e-06_AUG_6_HLAB5801_2_0.0001_1e-06__2_B5801_0404_Hubber_B5801_final.pth` |
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+ | B0702 | `ESMCBA_epitope_0.8_30_ESMMASK_epitope_FT_15_0.0001_0.001_AUG_6_HLAB0702_3_0.001_1e-06__4_B0702_Hubber_B0702_final.pth` |
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+ | C0701 | `ESMCBA_epitope_0.8_30_ESMMASK_epitope_FT_15_0.001_5e-05_AUG_1_HLAC0701_2_0.0001_1e-05__1_C0701_0404_Hubber_C0701_final.pth` |
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+ | B3801 | `ESMCBA_epitope_0.8_30_ESMMASK_epitope_FT_20_0.001_1e-06_AUG_3_HLAB3801_2_0.0001_1e-06__1_B3801_0404_Hubber_B3801_final.pth` |
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+ | C0303 | `ESMCBA_epitope_0.8_30_ESMMASK_epitope_FT_20_0.001_1e-06_AUG_3_HLAC0303_1_0.0001_1e-05__2_C0303_0404_Hubber_C0303_final.pth` |
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+ | B4501 | `ESMCBA_epitope_0.8_30_ESMMASK_epitope_FT_25_0.001_1e-06_AUG_1_HLAB4501_2_0.0001_1e-05__2_B4501_0404_Hubber_B4501_final.pth` |
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+ | B4001 | `ESMCBA_epitope_0.8_30_ESMMASK_epitope_FT_25_0.001_5e-05_AUG_6_HLAB4001_1_0.0001_1e-06__2_B4001_0404_Hubber_B4001_final.pth` |
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+ | A0201 | `ESMCBA_epitope_0.8_30_ESMMASK_epitope_FT_5_0.001_1e-06_AUG_6_HLAA0201_2_0.001_1e-06__2_A0201_Hubber_A0201_final.pth` |
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+ | C0602 | `ESMCBA_epitope_0.95_20_ESMMASK_epitope_FT_15_0.001_5e-05_AUG_1_HLAC0602_2_0.0001_1e-06__1_C0602_0404_Hubber_C0602_final.pth` |
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+ | A2501 | `ESMCBA_epitope_0.95_20_ESMMASK_epitope_FT_20_0.001_1e-06_AUG_1_HLAA2501_1_0.0001_1e-06__1_A2501_0404_Hubber_A2501_final.pth` |
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+ | B5401 | `ESMCBA_epitope_0.95_20_ESMMASK_epitope_FT_20_0.001_5e-05_AUG_1_HLAB5401_2_0.0001_1e-06__2_B5401_0404_Hubber_B5401_final.pth` |
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+ | A1101 | `ESMCBA_epitope_0.95_20_ESMMASK_epitope_FT_25_0.0001_1e-05_AUG_3_HLAA1101_5_0.001_1e-06__2_A1101_Hubber_A1101_final.pth` |
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+ | B1801 | `ESMCBA_epitope_0.95_20_ESMMASK_epitope_FT_25_0.0001_1e-05_AUG_6_HLAB1801_1_0.001_1e-06__4_B1801_Hubber_B1801_final.pth` |
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+ | B1501 | `ESMCBA_epitope_0.95_20_ESMMASK_epitope_FT_25_0.001_0.001_AUG_3_HLAB1501_2_0.001_0.001__2_B1501_Hubber_B1501_final.pth` |
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+ | A6801 | `ESMCBA_epitope_0.95_20_ESMMASK_epitope_FT_25_0.001_1e-05_AUG_1_HLAA6801_2_0.0001_1e-06__4_A6801_Hubber_A6801_final.pth` |
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+ | B2705 | `ESMCBA_epitope_0.95_20_ESMMASK_epitope_FT_25_0.001_1e-06_AUG_3_HLAB2705_2_0.0001_1e-06__2_B2705_0404_Hubber_B2705_final.pth` |
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+ | C0401 | `ESMCBA_epitope_0.95_20_ESMMASK_epitope_FT_25_0.001_1e-06_AUG_3_HLAC0401_2_0.0001_1e-06__1_C0401_0404_Hubber_C0401_final.pth` |
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+ | B1502 | `ESMCBA_epitope_0.95_20_ESMMASK_epitope_FT_25_0.001_5e-05_AUG_3_HLAB1502_1_1e-05_1e-05__1_B1502_0404_Hubber_B1502_final.pth` |
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+ | A0202 | `ESMCBA_epitope_0.95_20_ESMMASK_epitope_FT_25_0.001_5e-05_AUG_6_HLAA0202_1_0.0001_1e-05__2_A0202_0404_Hubber_A0202_final.pth` |
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+ | A2601 | `ESMCBA_epitope_0.95_30_ESMMASK_epitope_FT_15_0.0001_1e-05_AUG_1_HLAA2601_5_0.001_0.001__4_A2601_Hubber_A2601_final.pth` |
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+ | C0702 | `ESMCBA_epitope_0.95_30_ESMMASK_epitope_FT_15_0.001_5e-05_AUG_1_HLAC0702_1_0.0001_1e-05__1_C0702_0404_Hubber_C0702_final.pth` |
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+ | A3301 | `ESMCBA_epitope_0.95_30_ESMMASK_epitope_FT_20_0.001_0.001_AUG_1_HLAA3301_5_0.001_1e-06__4_A3301_Hubber_A3301_final.pth` |
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+ | B0801 | `ESMCBA_epitope_0.95_30_ESMMASK_epitope_FT_20_0.001_1e-06_AUG_1_HLAB0801_1_0.0001_1e-06__1_B0801_0404_Hubber_B0801_final.pth` |
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+ | B1517 | `ESMCBA_epitope_0.95_30_ESMMASK_epitope_FT_20_0.001_5e-05_AUG_3_HLAB1517_1_0.0001_1e-05__2_B1517_0404_Hubber_B1517_final.pth` |
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+ | A0203 | `ESMCBA_epitope_0.95_30_ESMMASK_epitope_FT_25_0.001_0.001_AUG_6_HLAA0203_2_0.001_0.001__2_A0203_Hubber_A0203_final.pth` |
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+ | B5701 | `ESMCBA_epitope_0.95_30_ESMMASK_epitope_FT_25_0.001_1e-05_AUG_1_HLAB5701_2_0.0001_1e-05__1_B5701_Hubber_B5701_final.pth` |
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+ | B4402 | `ESMCBA_epitope_0.95_30_ESMMASK_epitope_FT_25_0.001_1e-05_AUG_3_HLAB4402_1_0.001_0.001__2_B4402_Hubber_B4402_final.pth` |
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+ | A6802 | `ESMCBA_epitope_0.95_30_ESMMASK_epitope_FT_25_0.001_1e-06_AUG_6_HLAA6802_2_0.001_1e-06__4_A6802_Hubber_A6802_final.pth` |
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+ | B4403 | `ESMCBA_epitope_0.95_30_ESMMASK_epitope_FT_25_0.001_1e-06_AUG_3_HLAB4403_1_0.0001_1e-06__1_B4403_0404_Hubber_B4403_final.pth` |
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+ | C1402 | `ESMCBA_epitope_0.95_30_ESMMASK_epitope_FT_25_0.001_1e-06_AUG_3_HLAC1402_1_0.0001_1e-06__1_C1402_0404_Hubber_C1402_final.pth` |
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+ | B4002 | `ESMCBA_epitope_0.95_30_ESMMASK_epitope_FT_25_0.001_1e-06_AUG_6_HLAB4002_2_0.0001_1e-05__1_B4002_0404_Hubber_B4002_final.pth` |
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+ | A3101 | `ESMCBA_epitope_0.95_30_ESMMASK_epitope_FT_25_0.001_5e-05_AUG_3_HLAA3101_2_0.0001_1e-06__2_A3101_0404_Hubber_A3101_final.pth` |
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+ | B1402 | `ESMCBA_epitope_0.95_30_ESMMASK_epitope_FT_25_0.001_5e-05_AUG_3_HLAB1402_2_1e-05_1e-06__1_B1402_0404_Hubber_B1402_final.pth` |
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+ | B1503 | `ESMCBA_epitope_0.95_30_ESMMASK_epitope_FT_25_0.001_5e-05_AUG_6_HLAB1503_2_0.0001_1e-05__2_B1503_0404_Hubber_B1503_final.pth` |
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+
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+
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+ ## 10. Repro tip for papers and reviews
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  Record the exact commit of the code and the model snapshot. Example:
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  Encoding: epitope
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  ```
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+ ## 11. License and citation
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  [arxiv.org/abs/2507.13077](https://arxiv.org/pdf/2507.13077v1)
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