| """ |
| Example inference script for Cervical Cancer Classification model. |
| |
| Usage: |
| # From local directory: |
| python example_inference.py --image path/to/image.jpg --model ./ |
| |
| # From Hugging Face Hub: |
| python example_inference.py --image path/to/image.jpg --model toderian/cerviguard_lesion |
| """ |
|
|
| import argparse |
| import torch |
| import torch.nn as nn |
| from PIL import Image |
| import torchvision.transforms as T |
| from pathlib import Path |
| import json |
|
|
|
|
| class CervicalCancerCNN(nn.Module): |
| """CNN for cervical cancer classification.""" |
|
|
| def __init__(self, config=None): |
| super().__init__() |
|
|
| config = config or {} |
| conv_channels = config.get("conv_layers", [32, 64, 128, 256]) |
| fc_sizes = config.get("fc_layers", [256, 128]) |
| dropout = config.get("dropout", 0.5) |
| num_classes = config.get("num_classes", 4) |
|
|
| |
| layers = [] |
| in_channels = 3 |
| for out_channels in conv_channels: |
| layers.extend([ |
| nn.Conv2d(in_channels, out_channels, kernel_size=3, padding=1), |
| nn.BatchNorm2d(out_channels), |
| nn.ReLU(inplace=True), |
| nn.MaxPool2d(kernel_size=2, stride=2), |
| ]) |
| in_channels = out_channels |
|
|
| self.conv_layers = nn.Sequential(*layers) |
| self.avgpool = nn.AdaptiveAvgPool2d(1) |
|
|
| |
| fc_blocks = [] |
| in_features = conv_channels[-1] |
| for fc_size in fc_sizes: |
| fc_blocks.extend([ |
| nn.Linear(in_features, fc_size), |
| nn.ReLU(inplace=True), |
| nn.Dropout(dropout), |
| ]) |
| in_features = fc_size |
|
|
| self.fc_layers = nn.Sequential(*fc_blocks) |
| self.classifier = nn.Linear(in_features, num_classes) |
|
|
| def forward(self, x): |
| x = self.conv_layers(x) |
| x = self.avgpool(x) |
| x = x.view(x.size(0), -1) |
| x = self.fc_layers(x) |
| x = self.classifier(x) |
| return x |
|
|
|
|
| def load_model_local(model_dir, device="cpu"): |
| """Load model from local directory.""" |
| model_dir = Path(model_dir) |
|
|
| |
| config_path = model_dir / "config.json" |
| config = {} |
| if config_path.exists(): |
| with open(config_path) as f: |
| config = json.load(f) |
|
|
| |
| model = CervicalCancerCNN(config) |
|
|
| |
| if (model_dir / "model.safetensors").exists(): |
| from safetensors.torch import load_file |
| state_dict = load_file(str(model_dir / "model.safetensors")) |
| model.load_state_dict(state_dict) |
| elif (model_dir / "pytorch_model.bin").exists(): |
| state_dict = torch.load(model_dir / "pytorch_model.bin", map_location=device, weights_only=True) |
| model.load_state_dict(state_dict) |
| else: |
| raise FileNotFoundError(f"No model weights found in {model_dir}") |
|
|
| model.to(device) |
| model.eval() |
| return model, config |
|
|
|
|
| def load_model_hub(repo_id, device="cpu"): |
| """Load model from Hugging Face Hub.""" |
| from huggingface_hub import hf_hub_download, snapshot_download |
|
|
| |
| model_dir = snapshot_download(repo_id=repo_id) |
| return load_model_local(model_dir, device) |
|
|
|
|
| def load_model(model_path, device="cpu"): |
| """Load model from local path or Hugging Face Hub.""" |
| model_path = Path(model_path) |
|
|
| if model_path.exists(): |
| return load_model_local(model_path, device) |
| else: |
| |
| return load_model_hub(str(model_path), device) |
|
|
|
|
| def get_preprocessor(config): |
| """Get image preprocessing transform.""" |
| |
| input_size = config.get("input_size", {"height": 224, "width": 298}) |
| height = input_size.get("height", 224) |
| width = input_size.get("width", 298) |
|
|
| return T.Compose([ |
| T.Resize((height, width)), |
| T.ToTensor(), |
| T.Normalize(mean=[0.485, 0.456, 0.406], std=[0.229, 0.224, 0.225]), |
| ]) |
|
|
|
|
| def predict(model, image_tensor, config): |
| """Run inference and return prediction.""" |
| |
| id2label = config.get("id2label", { |
| "0": "Normal", |
| "1": "LSIL", |
| "2": "HSIL", |
| "3": "Cancer" |
| }) |
|
|
| with torch.no_grad(): |
| output = model(image_tensor) |
| probabilities = torch.softmax(output, dim=1)[0] |
| prediction = output.argmax(dim=1).item() |
|
|
| return { |
| "class_id": prediction, |
| "class_name": id2label.get(str(prediction), f"Class {prediction}"), |
| "probabilities": { |
| id2label.get(str(i), f"Class {i}"): f"{prob:.2%}" |
| for i, prob in enumerate(probabilities.tolist()) |
| }, |
| "confidence": f"{probabilities[prediction]:.2%}" |
| } |
|
|
|
|
| def main(): |
| parser = argparse.ArgumentParser(description="Cervical Cancer Classification") |
| parser.add_argument("--image", required=True, help="Path to input image") |
| parser.add_argument("--model", default="./", help="Path to model dir or HF repo ID") |
| parser.add_argument("--device", default="cpu", help="Device (cpu/cuda)") |
| args = parser.parse_args() |
|
|
| print(f"Loading model from {args.model}...") |
| model, config = load_model(args.model, args.device) |
|
|
| print(f"Processing image: {args.image}") |
| transform = get_preprocessor(config) |
| image = Image.open(args.image).convert('RGB') |
| image_tensor = transform(image).unsqueeze(0).to(args.device) |
|
|
| result = predict(model, image_tensor, config) |
|
|
| print("\n" + "=" * 50) |
| print("PREDICTION RESULT") |
| print("=" * 50) |
| print(f"Class: {result['class_name']}") |
| print(f"Confidence: {result['confidence']}") |
| print("\nAll probabilities:") |
| for cls, prob in result['probabilities'].items(): |
| print(f" {cls}: {prob}") |
|
|
|
|
| if __name__ == "__main__": |
| main() |
|
|