---
language:
- en
license: apache-2.0
tags:
- sentence-transformers
- sentence-similarity
- feature-extraction
- generated_from_trainer
- dataset_size:9432
- loss:MatryoshkaLoss
- loss:MultipleNegativesRankingLoss
base_model: sentence-transformers/all-MiniLM-L6-v2
widget:
- source_sentence: Atherosclerosis and coronary heart disease are examples of what
type of body system disease?
sentences:
- Diseases of the cardiovascular system are common and may be life threatening.
Examples include atherosclerosis and coronary heart disease. A healthy lifestyle
can reduce the risk of such diseases developing. This includes avoiding smoking,
getting regular physical activity, and maintaining a healthy percent of body fat.
- Osmosis Osmosis is the diffusion of water through a semipermeable membrane according
to the concentration gradient of water across the membrane. Whereas diffusion
transports material across membranes and within cells, osmosis transports only
water across a membrane and the membrane limits the diffusion of solutes in the
water. Osmosis is a special case of diffusion. Water, like other substances, moves
from an area of higher concentration to one of lower concentration. Imagine a
beaker with a semipermeable membrane, separating the two sides or halves (Figure
3.21). On both sides of the membrane, the water level is the same, but there are
different concentrations on each side of a dissolved substance, or solute, that
cannot cross the membrane. If the volume of the water is the same, but the concentrations
of solute are different, then there are also different concentrations of water,
the solvent, on either side of the membrane.
- Circadian rhythms are regular changes in biology or behavior that occur in a 24-hour
cycle. In humans, for example, blood pressure and body temperature change in a
regular way throughout each 24-hour day. Animals may eat and drink at certain
times of day as well. Humans have daily cycles of behavior, too. Most people start
to get sleepy after dark and have a hard time sleeping when it is light outside.
In many species, including humans, circadian rhythms are controlled by a tiny
structure called the biological clock . This structure is located in a gland at
the base of the brain. The biological clock sends signals to the body. The signals
cause regular changes in behavior and body processes. The amount of light entering
the eyes helps control the biological clock. The clock causes changes that repeat
every 24 hours.
- source_sentence: How does a cell's membrane keep extracellular materials from mixing
with it's internal components?
sentences:
- We know that the Universe is expanding. Astronomers have wondered if it is expanding
fast enough to escape the pull of gravity. Would the Universe just expand forever?
If it could not escape the pull of gravity, would it someday start to contract?
This means it would eventually get squeezed together in a big crunch. This is
the opposite of the Big Bang.
- Physical properties that do not depend on the amount of substance present are
called intensive properties . Intensive properties do not change with changes
of size, shape, or scale. Examples of intensive properties are as follows in the
Table below .
- CHAPTER REVIEW 3.1 The Cell Membrane The cell membrane provides a barrier around
the cell, separating its internal components from the extracellular environment.
It is composed of a phospholipid bilayer, with hydrophobic internal lipid “tails”
and hydrophilic external phosphate “heads. ” Various membrane proteins are scattered
throughout the bilayer, both inserted within it and attached to it peripherally.
The cell membrane is selectively permeable, allowing only a limited number of
materials to diffuse through its lipid bilayer. All materials that cross the membrane
do so using passive (non energy-requiring) or active (energy-requiring) transport
processes. During passive transport, materials move by simple diffusion or by
facilitated diffusion through the membrane, down their concentration gradient.
Water passes through the membrane in a diffusion process called osmosis. During
active transport, energy is expended to assist material movement across the membrane
in a direction against their concentration gradient. Active transport may take
place with the help of protein pumps or through the use of vesicles.
- source_sentence: An infection may be intracellular or extracellular, depending on
this?
sentences:
- '22.3 Magnetic Fields and Magnetic Field Lines • Magnetic fields can be pictorially
represented by magnetic field lines, the properties of which are as follows: 1.
The field is tangent to the magnetic field line. Field strength is proportional
to the line density. Field lines cannot cross. Field lines are continuous loops.'
- Figure 24.13 The lifecycle of an ascomycete is characterized by the production
of asci during the sexual phase. The haploid phase is the predominant phase of
the life cycle.
- Caffeine is an example of a psychoactive drug. It is found in coffee and many
other products (see Table below ). Caffeine is a central nervous system stimulant
. Like other stimulant drugs, it makes you feel more awake and alert. Other psychoactive
drugs include alcohol, nicotine, and marijuana. Each has a different effect on
the central nervous system. Alcohol, for example, is a depressant . It has the
opposite effects of a stimulant like caffeine.
- source_sentence: What does water treatment do to water?
sentences:
- Some solutes, such as sodium acetate, do not recrystallize easily. Suppose an
exactly saturated solution of sodium acetate is prepared at 50°C. As it cools
back to room temperature, no crystals appear in the solution, even though the
solubility of sodium acetate is lower at room temperature. A supersaturated solution
is a solution that contains more than the maximum amount of solute that is capable
of being dissolved at a given temperature. The recrystallization of the excess
dissolved solute in a supersaturated solution can be initiated by the addition
of a tiny crystal of solute, called a seed crystal. The seed crystal provides
a nucleation site on which the excess dissolved crystals can begin to grow. Recrystallization
from a supersaturated solution is typically very fast.
- Figure 23.13, the esophagus runs a mainly straight route through the mediastinum
of the thorax. To enter the abdomen, the esophagus penetrates the diaphragm through
an opening called the esophageal hiatus.
- Water treatment is a series of processes that remove unwanted substances from
water. More processes are needed to purify water for drinking than for other uses.
- source_sentence: 'There are only four possible bases that make up each dna nucleotide:
adenine, guanine, thymine, and?'
sentences:
- Metamorphism. This long word means “to change form. “ A rock undergoes metamorphism
if it is exposed to extreme heat and pressure within the crust. With metamorphism
, the rock does not melt all the way. The rock changes due to heat and pressure.
A metamorphic rock may have a new mineral composition and/or texture.
- Forest and Kim Starr (Flickr:Starr Environmental). Secondary succession occurs
when nature reclaims areas formerly occupied by life . CC BY 2.0.
- 'The only difference between each nucleotide is the identity of the base. There
are only four possible bases that make up each DNA nucleotide: adenine (A), guanine
(G), thymine (T), and cytosine (C).'
pipeline_tag: sentence-similarity
library_name: sentence-transformers
metrics:
- cosine_accuracy@1
- cosine_accuracy@3
- cosine_accuracy@5
- cosine_accuracy@10
- cosine_precision@1
- cosine_precision@3
- cosine_precision@5
- cosine_precision@10
- cosine_recall@1
- cosine_recall@3
- cosine_recall@5
- cosine_recall@10
- cosine_ndcg@10
- cosine_mrr@10
- cosine_map@100
model-index:
- name: MNLP M3 Encoder SciQA
results:
- task:
type: information-retrieval
name: Information Retrieval
dataset:
name: dim 384
type: dim_384
metrics:
- type: cosine_accuracy@1
value: 0.6101048617731173
name: Cosine Accuracy@1
- type: cosine_accuracy@3
value: 0.8007626310772163
name: Cosine Accuracy@3
- type: cosine_accuracy@5
value: 0.8541468064823642
name: Cosine Accuracy@5
- type: cosine_accuracy@10
value: 0.9256434699714013
name: Cosine Accuracy@10
- type: cosine_precision@1
value: 0.6101048617731173
name: Cosine Precision@1
- type: cosine_precision@3
value: 0.2669208770257388
name: Cosine Precision@3
- type: cosine_precision@5
value: 0.17082936129647283
name: Cosine Precision@5
- type: cosine_precision@10
value: 0.09256434699714014
name: Cosine Precision@10
- type: cosine_recall@1
value: 0.6101048617731173
name: Cosine Recall@1
- type: cosine_recall@3
value: 0.8007626310772163
name: Cosine Recall@3
- type: cosine_recall@5
value: 0.8541468064823642
name: Cosine Recall@5
- type: cosine_recall@10
value: 0.9256434699714013
name: Cosine Recall@10
- type: cosine_ndcg@10
value: 0.7675175612283535
name: Cosine Ndcg@10
- type: cosine_mrr@10
value: 0.7170116664396936
name: Cosine Mrr@10
- type: cosine_map@100
value: 0.7197084605820631
name: Cosine Map@100
- task:
type: information-retrieval
name: Information Retrieval
dataset:
name: dim 256
type: dim_256
metrics:
- type: cosine_accuracy@1
value: 0.5948522402287894
name: Cosine Accuracy@1
- type: cosine_accuracy@3
value: 0.792183031458532
name: Cosine Accuracy@3
- type: cosine_accuracy@5
value: 0.8398474737845567
name: Cosine Accuracy@5
- type: cosine_accuracy@10
value: 0.9151572926596759
name: Cosine Accuracy@10
- type: cosine_precision@1
value: 0.5948522402287894
name: Cosine Precision@1
- type: cosine_precision@3
value: 0.2640610104861773
name: Cosine Precision@3
- type: cosine_precision@5
value: 0.16796949475691134
name: Cosine Precision@5
- type: cosine_precision@10
value: 0.09151572926596759
name: Cosine Precision@10
- type: cosine_recall@1
value: 0.5948522402287894
name: Cosine Recall@1
- type: cosine_recall@3
value: 0.792183031458532
name: Cosine Recall@3
- type: cosine_recall@5
value: 0.8398474737845567
name: Cosine Recall@5
- type: cosine_recall@10
value: 0.9151572926596759
name: Cosine Recall@10
- type: cosine_ndcg@10
value: 0.7548435122429773
name: Cosine Ndcg@10
- type: cosine_mrr@10
value: 0.7035797509343749
name: Cosine Mrr@10
- type: cosine_map@100
value: 0.7070932589939358
name: Cosine Map@100
- task:
type: information-retrieval
name: Information Retrieval
dataset:
name: dim 192
type: dim_192
metrics:
- type: cosine_accuracy@1
value: 0.5910390848427073
name: Cosine Accuracy@1
- type: cosine_accuracy@3
value: 0.7778836987607245
name: Cosine Accuracy@3
- type: cosine_accuracy@5
value: 0.8360343183984748
name: Cosine Accuracy@5
- type: cosine_accuracy@10
value: 0.9046711153479504
name: Cosine Accuracy@10
- type: cosine_precision@1
value: 0.5910390848427073
name: Cosine Precision@1
- type: cosine_precision@3
value: 0.25929456625357483
name: Cosine Precision@3
- type: cosine_precision@5
value: 0.16720686367969495
name: Cosine Precision@5
- type: cosine_precision@10
value: 0.09046711153479504
name: Cosine Precision@10
- type: cosine_recall@1
value: 0.5910390848427073
name: Cosine Recall@1
- type: cosine_recall@3
value: 0.7778836987607245
name: Cosine Recall@3
- type: cosine_recall@5
value: 0.8360343183984748
name: Cosine Recall@5
- type: cosine_recall@10
value: 0.9046711153479504
name: Cosine Recall@10
- type: cosine_ndcg@10
value: 0.7477240665900656
name: Cosine Ndcg@10
- type: cosine_mrr@10
value: 0.6975449029309853
name: Cosine Mrr@10
- type: cosine_map@100
value: 0.7014228144337117
name: Cosine Map@100
- task:
type: information-retrieval
name: Information Retrieval
dataset:
name: dim 128
type: dim_128
metrics:
- type: cosine_accuracy@1
value: 0.567206863679695
name: Cosine Accuracy@1
- type: cosine_accuracy@3
value: 0.7616777883698761
name: Cosine Accuracy@3
- type: cosine_accuracy@5
value: 0.8265014299332698
name: Cosine Accuracy@5
- type: cosine_accuracy@10
value: 0.8903717826501429
name: Cosine Accuracy@10
- type: cosine_precision@1
value: 0.567206863679695
name: Cosine Precision@1
- type: cosine_precision@3
value: 0.253892596123292
name: Cosine Precision@3
- type: cosine_precision@5
value: 0.16530028598665394
name: Cosine Precision@5
- type: cosine_precision@10
value: 0.08903717826501431
name: Cosine Precision@10
- type: cosine_recall@1
value: 0.567206863679695
name: Cosine Recall@1
- type: cosine_recall@3
value: 0.7616777883698761
name: Cosine Recall@3
- type: cosine_recall@5
value: 0.8265014299332698
name: Cosine Recall@5
- type: cosine_recall@10
value: 0.8903717826501429
name: Cosine Recall@10
- type: cosine_ndcg@10
value: 0.7273531110418706
name: Cosine Ndcg@10
- type: cosine_mrr@10
value: 0.6752920392815543
name: Cosine Mrr@10
- type: cosine_map@100
value: 0.6794753898354032
name: Cosine Map@100
- task:
type: information-retrieval
name: Information Retrieval
dataset:
name: dim 96
type: dim_96
metrics:
- type: cosine_accuracy@1
value: 0.5529075309818875
name: Cosine Accuracy@1
- type: cosine_accuracy@3
value: 0.7416587225929456
name: Cosine Accuracy@3
- type: cosine_accuracy@5
value: 0.8093422306959008
name: Cosine Accuracy@5
- type: cosine_accuracy@10
value: 0.8741658722592945
name: Cosine Accuracy@10
- type: cosine_precision@1
value: 0.5529075309818875
name: Cosine Precision@1
- type: cosine_precision@3
value: 0.24721957419764853
name: Cosine Precision@3
- type: cosine_precision@5
value: 0.1618684461391802
name: Cosine Precision@5
- type: cosine_precision@10
value: 0.08741658722592945
name: Cosine Precision@10
- type: cosine_recall@1
value: 0.5529075309818875
name: Cosine Recall@1
- type: cosine_recall@3
value: 0.7416587225929456
name: Cosine Recall@3
- type: cosine_recall@5
value: 0.8093422306959008
name: Cosine Recall@5
- type: cosine_recall@10
value: 0.8741658722592945
name: Cosine Recall@10
- type: cosine_ndcg@10
value: 0.7125237648315317
name: Cosine Ndcg@10
- type: cosine_mrr@10
value: 0.6608247461679306
name: Cosine Mrr@10
- type: cosine_map@100
value: 0.6652525185575742
name: Cosine Map@100
- task:
type: information-retrieval
name: Information Retrieval
dataset:
name: dim 64
type: dim_64
metrics:
- type: cosine_accuracy@1
value: 0.5166825548141086
name: Cosine Accuracy@1
- type: cosine_accuracy@3
value: 0.7054337464251669
name: Cosine Accuracy@3
- type: cosine_accuracy@5
value: 0.7673975214489991
name: Cosine Accuracy@5
- type: cosine_accuracy@10
value: 0.8369876072449952
name: Cosine Accuracy@10
- type: cosine_precision@1
value: 0.5166825548141086
name: Cosine Precision@1
- type: cosine_precision@3
value: 0.23514458214172226
name: Cosine Precision@3
- type: cosine_precision@5
value: 0.1534795042897998
name: Cosine Precision@5
- type: cosine_precision@10
value: 0.08369876072449953
name: Cosine Precision@10
- type: cosine_recall@1
value: 0.5166825548141086
name: Cosine Recall@1
- type: cosine_recall@3
value: 0.7054337464251669
name: Cosine Recall@3
- type: cosine_recall@5
value: 0.7673975214489991
name: Cosine Recall@5
- type: cosine_recall@10
value: 0.8369876072449952
name: Cosine Recall@10
- type: cosine_ndcg@10
value: 0.6755921916053389
name: Cosine Ndcg@10
- type: cosine_mrr@10
value: 0.6240088822309986
name: Cosine Mrr@10
- type: cosine_map@100
value: 0.629350282837756
name: Cosine Map@100
---
# MNLP M3 Encoder SciQA
This is a [sentence-transformers](https://www.SBERT.net) model finetuned from [sentence-transformers/all-MiniLM-L6-v2](https://huggingface.co/sentence-transformers/all-MiniLM-L6-v2) on the json dataset. It maps sentences & paragraphs to a 384-dimensional dense vector space and can be used for semantic textual similarity, semantic search, paraphrase mining, text classification, clustering, and more.
## Model Details
### Model Description
- **Model Type:** Sentence Transformer
- **Base model:** [sentence-transformers/all-MiniLM-L6-v2](https://huggingface.co/sentence-transformers/all-MiniLM-L6-v2)
- **Maximum Sequence Length:** 256 tokens
- **Output Dimensionality:** 384 dimensions
- **Similarity Function:** Cosine Similarity
- **Training Dataset:**
- json
- **Language:** en
- **License:** apache-2.0
### Model Sources
- **Documentation:** [Sentence Transformers Documentation](https://sbert.net)
- **Repository:** [Sentence Transformers on GitHub](https://github.com/UKPLab/sentence-transformers)
- **Hugging Face:** [Sentence Transformers on Hugging Face](https://huggingface.co/models?library=sentence-transformers)
### Full Model Architecture
```
SentenceTransformer(
(0): Transformer({'max_seq_length': 256, 'do_lower_case': False}) with Transformer model: BertModel
(1): Pooling({'word_embedding_dimension': 384, 'pooling_mode_cls_token': False, 'pooling_mode_mean_tokens': True, 'pooling_mode_max_tokens': False, 'pooling_mode_mean_sqrt_len_tokens': False, 'pooling_mode_weightedmean_tokens': False, 'pooling_mode_lasttoken': False, 'include_prompt': True})
(2): Normalize()
)
```
## Usage
### Direct Usage (Sentence Transformers)
First install the Sentence Transformers library:
```bash
pip install -U sentence-transformers
```
Then you can load this model and run inference.
```python
from sentence_transformers import SentenceTransformer
# Download from the 🤗 Hub
model = SentenceTransformer("sentence_transformers_model_id")
# Run inference
sentences = [
'There are only four possible bases that make up each dna nucleotide: adenine, guanine, thymine, and?',
'The only difference between each nucleotide is the identity of the base. There are only four possible bases that make up each DNA nucleotide: adenine (A), guanine (G), thymine (T), and cytosine (C).',
'Metamorphism. This long word means “to change form. “ A rock undergoes metamorphism if it is exposed to extreme heat and pressure within the crust. With metamorphism , the rock does not melt all the way. The rock changes due to heat and pressure. A metamorphic rock may have a new mineral composition and/or texture.',
]
embeddings = model.encode(sentences)
print(embeddings.shape)
# [3, 384]
# Get the similarity scores for the embeddings
similarities = model.similarity(embeddings, embeddings)
print(similarities.shape)
# [3, 3]
```
## Evaluation
### Metrics
#### Information Retrieval
* Datasets: `dim_384`, `dim_256`, `dim_192`, `dim_128`, `dim_96` and `dim_64`
* Evaluated with [InformationRetrievalEvaluator](https://sbert.net/docs/package_reference/sentence_transformer/evaluation.html#sentence_transformers.evaluation.InformationRetrievalEvaluator)
| Metric | dim_384 | dim_256 | dim_192 | dim_128 | dim_96 | dim_64 |
|:--------------------|:-----------|:-----------|:-----------|:-----------|:-----------|:-----------|
| cosine_accuracy@1 | 0.6101 | 0.5949 | 0.591 | 0.5672 | 0.5529 | 0.5167 |
| cosine_accuracy@3 | 0.8008 | 0.7922 | 0.7779 | 0.7617 | 0.7417 | 0.7054 |
| cosine_accuracy@5 | 0.8541 | 0.8398 | 0.836 | 0.8265 | 0.8093 | 0.7674 |
| cosine_accuracy@10 | 0.9256 | 0.9152 | 0.9047 | 0.8904 | 0.8742 | 0.837 |
| cosine_precision@1 | 0.6101 | 0.5949 | 0.591 | 0.5672 | 0.5529 | 0.5167 |
| cosine_precision@3 | 0.2669 | 0.2641 | 0.2593 | 0.2539 | 0.2472 | 0.2351 |
| cosine_precision@5 | 0.1708 | 0.168 | 0.1672 | 0.1653 | 0.1619 | 0.1535 |
| cosine_precision@10 | 0.0926 | 0.0915 | 0.0905 | 0.089 | 0.0874 | 0.0837 |
| cosine_recall@1 | 0.6101 | 0.5949 | 0.591 | 0.5672 | 0.5529 | 0.5167 |
| cosine_recall@3 | 0.8008 | 0.7922 | 0.7779 | 0.7617 | 0.7417 | 0.7054 |
| cosine_recall@5 | 0.8541 | 0.8398 | 0.836 | 0.8265 | 0.8093 | 0.7674 |
| cosine_recall@10 | 0.9256 | 0.9152 | 0.9047 | 0.8904 | 0.8742 | 0.837 |
| **cosine_ndcg@10** | **0.7675** | **0.7548** | **0.7477** | **0.7274** | **0.7125** | **0.6756** |
| cosine_mrr@10 | 0.717 | 0.7036 | 0.6975 | 0.6753 | 0.6608 | 0.624 |
| cosine_map@100 | 0.7197 | 0.7071 | 0.7014 | 0.6795 | 0.6653 | 0.6294 |
## Training Details
### Training Dataset
#### json
* Dataset: json
* Size: 9,432 training samples
* Columns: anchor and positive
* Approximate statistics based on the first 1000 samples:
| | anchor | positive |
|:--------|:----------------------------------------------------------------------------------|:------------------------------------------------------------------------------------|
| type | string | string |
| details |
What is the term for atherosclerosis of arteries that supply the heart muscle? | Atherosclerosis of arteries that supply the heart muscle is called coronary heart disease . This disease may or may not have symptoms, such as chest pain. As the disease progresses, there is an increased risk of heart attack. A heart attack occurs when the blood supply to part of the heart muscle is blocked and cardiac muscle fibers die. Coronary heart disease is the leading cause of death of adults in the United States. |
| What term describes a drug that has an effect on the central nervous system? | Caffeine is an example of a psychoactive drug. It is found in coffee and many other products (see Table below ). Caffeine is a central nervous system stimulant . Like other stimulant drugs, it makes you feel more awake and alert. Other psychoactive drugs include alcohol, nicotine, and marijuana. Each has a different effect on the central nervous system. Alcohol, for example, is a depressant . It has the opposite effects of a stimulant like caffeine. |
| What scale is used to succinctly communicate the acidity or basicity of a solution? | The pH scale is used to succinctly communicate the acidity or basicity of a solution. |
* Loss: [MatryoshkaLoss](https://sbert.net/docs/package_reference/sentence_transformer/losses.html#matryoshkaloss) with these parameters:
```json
{
"loss": "MultipleNegativesRankingLoss",
"matryoshka_dims": [
384,
256,
192,
128,
96,
64
],
"matryoshka_weights": [
1,
1,
1,
1,
1,
1
],
"n_dims_per_step": -1
}
```
### Training Hyperparameters
#### Non-Default Hyperparameters
- `eval_strategy`: epoch
- `per_device_train_batch_size`: 32
- `per_device_eval_batch_size`: 16
- `gradient_accumulation_steps`: 16
- `learning_rate`: 2e-05
- `num_train_epochs`: 4
- `lr_scheduler_type`: cosine
- `warmup_ratio`: 0.1
- `bf16`: True
- `tf32`: True
- `load_best_model_at_end`: True
- `optim`: adamw_torch_fused
- `batch_sampler`: no_duplicates
#### All Hyperparameters