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+ ---
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+ license: apache-2.0
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+ tags:
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+ - generated_from_trainer
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+ metrics:
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+ - accuracy
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+ model-index:
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+ - name: BioLinkBERT-LitCovid-v1.2.4
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+ results: []
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+ ---
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+
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+ <!-- This model card has been generated automatically according to the information the Trainer had access to. You
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+ should probably proofread and complete it, then remove this comment. -->
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+
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+ # BioLinkBERT-LitCovid-v1.2.4
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+
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+ This model is a fine-tuned version of [michiyasunaga/BioLinkBERT-base](https://huggingface.co/michiyasunaga/BioLinkBERT-base) on an unknown dataset.
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+ It achieves the following results on the evaluation set:
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+ - Loss: 0.2160
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+ - F1 micro: 0.8926
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+ - F1 macro: 0.3237
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+ - F1 weighted: 0.9016
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+ - F1 samples: 0.9024
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+ - Precision micro: 0.8426
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+ - Precision macro: 0.2736
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+ - Precision weighted: 0.8627
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+ - Precision samples: 0.8871
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+ - Recall micro: 0.9490
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+ - Recall macro: 0.4834
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+ - Recall weighted: 0.9490
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+ - Recall samples: 0.9544
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+ - Roc Auc: 0.9697
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+ - Accuracy: 0.7353
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+
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+ ## Model description
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+
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+ More information needed
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+
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+ ## Intended uses & limitations
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+
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+ More information needed
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+
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+ ## Training and evaluation data
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+
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+ More information needed
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+
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+ ## Training procedure
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+
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+ ### Training hyperparameters
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+
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+ The following hyperparameters were used during training:
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+ - learning_rate: 2e-05
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+ - train_batch_size: 16
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+ - eval_batch_size: 16
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+ - seed: 42
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+ - optimizer: Adam with betas=(0.9,0.999) and epsilon=1e-08
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+ - lr_scheduler_type: linear
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+ - num_epochs: 3
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+
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+ ### Training results
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+
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+ | Training Loss | Epoch | Step | Validation Loss | F1 micro | F1 macro | F1 weighted | F1 samples | Precision micro | Precision macro | Precision weighted | Precision samples | Recall micro | Recall macro | Recall weighted | Recall samples | Roc Auc | Accuracy |
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+ |:-------------:|:-----:|:----:|:---------------:|:--------:|:--------:|:-----------:|:----------:|:---------------:|:---------------:|:------------------:|:-----------------:|:------------:|:------------:|:---------------:|:--------------:|:-------:|:--------:|
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+ | 0.4454 | 1.0 | 2248 | 0.3019 | 0.8637 | 0.2988 | 0.8757 | 0.8789 | 0.7937 | 0.2500 | 0.8205 | 0.8518 | 0.9471 | 0.4390 | 0.9471 | 0.9528 | 0.9669 | 0.6618 |
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+ | 0.2453 | 2.0 | 4496 | 0.2696 | 0.8852 | 0.3387 | 0.8917 | 0.8947 | 0.8231 | 0.2862 | 0.8377 | 0.8701 | 0.9574 | 0.4723 | 0.9574 | 0.9602 | 0.9731 | 0.7056 |
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+ | 0.1271 | 3.0 | 6744 | 0.2160 | 0.8926 | 0.3237 | 0.9016 | 0.9024 | 0.8426 | 0.2736 | 0.8627 | 0.8871 | 0.9490 | 0.4834 | 0.9490 | 0.9544 | 0.9697 | 0.7353 |
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+
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+
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+ ### Framework versions
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+
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+ - Transformers 4.28.0
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+ - Pytorch 2.0.0
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+ - Datasets 2.1.0
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+ - Tokenizers 0.13.3