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update model card README.md
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README.md
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---
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license: apache-2.0
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tags:
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- generated_from_trainer
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metrics:
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- accuracy
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model-index:
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- name: Bioformer-LitCovid-v1.3h
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results: []
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---
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<!-- This model card has been generated automatically according to the information the Trainer had access to. You
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should probably proofread and complete it, then remove this comment. -->
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# Bioformer-LitCovid-v1.3h
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This model is a fine-tuned version of [bioformers/bioformer-litcovid](https://huggingface.co/bioformers/bioformer-litcovid) on an unknown dataset.
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It achieves the following results on the evaluation set:
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- Loss: 0.8951
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- Hamming loss: 0.0168
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- F1 micro: 0.8565
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- F1 macro: 0.3960
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- F1 weighted: 0.8831
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- F1 samples: 0.8789
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- Precision micro: 0.7903
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- Precision macro: 0.3221
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- Precision weighted: 0.8426
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- Precision samples: 0.8631
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- Recall micro: 0.9348
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- Recall macro: 0.6915
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- Recall weighted: 0.9348
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- Recall samples: 0.9435
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- Roc Auc: 0.9604
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- Accuracy: 0.6896
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## Model description
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More information needed
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## Intended uses & limitations
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More information needed
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## Training and evaluation data
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More information needed
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## Training procedure
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### Training hyperparameters
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The following hyperparameters were used during training:
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- learning_rate: 0.0001
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- train_batch_size: 16
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- eval_batch_size: 32
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- seed: 42
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- optimizer: Adam with betas=(0.9,0.999) and epsilon=1e-08
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- lr_scheduler_type: linear
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- lr_scheduler_warmup_steps: 3257
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- num_epochs: 5
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### Training results
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| Training Loss | Epoch | Step | Validation Loss | Hamming loss | F1 micro | F1 macro | F1 weighted | F1 samples | Precision micro | Precision macro | Precision weighted | Precision samples | Recall micro | Recall macro | Recall weighted | Recall samples | Roc Auc | Accuracy |
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|:-------------:|:-----:|:-----:|:---------------:|:------------:|:--------:|:--------:|:-----------:|:----------:|:---------------:|:---------------:|:------------------:|:-----------------:|:------------:|:------------:|:---------------:|:--------------:|:-------:|:--------:|
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| 1.2033 | 1.0 | 2272 | 0.5628 | 0.0616 | 0.6107 | 0.2167 | 0.7918 | 0.7257 | 0.4618 | 0.1789 | 0.7347 | 0.6771 | 0.9014 | 0.7310 | 0.9014 | 0.9194 | 0.9209 | 0.3870 |
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| 1.2127 | 2.0 | 4544 | 0.5062 | 0.0325 | 0.7555 | 0.2834 | 0.8357 | 0.8037 | 0.6337 | 0.2273 | 0.7680 | 0.7535 | 0.9353 | 0.7100 | 0.9353 | 0.9434 | 0.9523 | 0.4954 |
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| 0.96 | 3.0 | 6816 | 0.4943 | 0.0245 | 0.8043 | 0.3363 | 0.8608 | 0.8409 | 0.7043 | 0.2676 | 0.8069 | 0.8048 | 0.9372 | 0.7637 | 0.9372 | 0.9477 | 0.9575 | 0.5735 |
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| 0.5852 | 4.0 | 9088 | 0.7306 | 0.0195 | 0.8371 | 0.3860 | 0.8687 | 0.8624 | 0.7568 | 0.3083 | 0.8212 | 0.8378 | 0.9365 | 0.7232 | 0.9365 | 0.9459 | 0.9597 | 0.6410 |
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| 0.3454 | 5.0 | 11360 | 0.8951 | 0.0168 | 0.8565 | 0.3960 | 0.8831 | 0.8789 | 0.7903 | 0.3221 | 0.8426 | 0.8631 | 0.9348 | 0.6915 | 0.9348 | 0.9435 | 0.9604 | 0.6896 |
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### Framework versions
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- Transformers 4.28.0
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- Pytorch 2.0.0
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- Datasets 2.1.0
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- Tokenizers 0.13.3
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