File size: 3,435 Bytes
988fbc4 | 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 | {
"label_encoder_classes": [
"destabilizing",
"neutral",
"stabilizing"
],
"num_classes": 3,
"best_hyperparams": {
"learning_rate": 0.0001,
"dropout": 0.3,
"lambda_reg": 0.5,
"lambda_cls": 0.5
},
"expected_value_reg": -1.0198863744735718,
"expected_value_cls": [
-0.5417895317077637,
0.3860914409160614,
0.6462976932525635
],
"AA_PROPERTIES": {
"A": {
"hydrophobicity": 1.8,
"volume": 88.6,
"charge": 0,
"polarity": 0
},
"R": {
"hydrophobicity": -4.5,
"volume": 173.4,
"charge": 1,
"polarity": 1
},
"N": {
"hydrophobicity": -3.5,
"volume": 114.1,
"charge": 0,
"polarity": 1
},
"D": {
"hydrophobicity": -3.5,
"volume": 111.1,
"charge": -1,
"polarity": 1
},
"C": {
"hydrophobicity": 2.5,
"volume": 108.5,
"charge": 0,
"polarity": 0
},
"Q": {
"hydrophobicity": -3.5,
"volume": 143.8,
"charge": 0,
"polarity": 1
},
"E": {
"hydrophobicity": -3.5,
"volume": 138.4,
"charge": -1,
"polarity": 1
},
"G": {
"hydrophobicity": -0.4,
"volume": 60.1,
"charge": 0,
"polarity": 0
},
"H": {
"hydrophobicity": -3.2,
"volume": 153.2,
"charge": 0.1,
"polarity": 1
},
"I": {
"hydrophobicity": 4.5,
"volume": 166.7,
"charge": 0,
"polarity": 0
},
"L": {
"hydrophobicity": 3.8,
"volume": 166.7,
"charge": 0,
"polarity": 0
},
"K": {
"hydrophobicity": -3.9,
"volume": 168.6,
"charge": 1,
"polarity": 1
},
"M": {
"hydrophobicity": 1.9,
"volume": 162.9,
"charge": 0,
"polarity": 0
},
"F": {
"hydrophobicity": 2.8,
"volume": 203.4,
"charge": 0,
"polarity": 0
},
"P": {
"hydrophobicity": -1.6,
"volume": 112.7,
"charge": 0,
"polarity": 0
},
"S": {
"hydrophobicity": -0.8,
"volume": 89.0,
"charge": 0,
"polarity": 1
},
"T": {
"hydrophobicity": -0.7,
"volume": 116.1,
"charge": 0,
"polarity": 1
},
"W": {
"hydrophobicity": -0.9,
"volume": 227.8,
"charge": 0,
"polarity": 1
},
"Y": {
"hydrophobicity": -1.3,
"volume": 203.0,
"charge": 0,
"polarity": 1
},
"V": {
"hydrophobicity": 4.2,
"volume": 117.5,
"charge": 0,
"polarity": 0
},
"X": {
"hydrophobicity": 0,
"volume": 0,
"charge": 0,
"polarity": 0
}
}
} |