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# app.py (Final UI Polish Version)
import gradio as gr
from pathlib import Path
from huggingface_hub import snapshot_download
import asyncio
from app.prediction import PredictionPipeline
from app.database import add_patient_record, get_all_records
# --- Initialization ---
prediction_pipeline = PredictionPipeline()
HF_DATASET_REPO = "ALYYAN/chest-xray-pneumonia-samples"
try:
SAMPLE_IMAGE_DIR = Path(snapshot_download(repo_id=HF_DATASET_REPO, repo_type="dataset"))
SAMPLE_IMAGES = [str(p) for p in list(SAMPLE_IMAGE_DIR.glob('*/*.jpeg'))]
except Exception as e:
print(f"Could not download sample images: {e}")
SAMPLE_IMAGES = []
# --- Core Logic (Async Functions) ---
async def process_analysis(patient_name, patient_age, image_list, is_sample=False):
if not is_sample and (not patient_name or patient_age is None or str(patient_age).strip() == ""):
raise gr.Error("Patient Name and Age are required.")
if not image_list:
raise gr.Error("At least one image is required.")
result = prediction_pipeline.predict(image_list)
if "error" in result:
raise gr.Error(result["error"])
final_pred = result["final_prediction"]
final_conf = result["final_confidence"]
if not is_sample:
await add_patient_record(str(patient_name), int(patient_age), final_pred, final_conf)
confidences = {"NORMAL": 0.0, "PNEUMONIA": 0.0}
confidences[final_pred] = final_conf
confidences["NORMAL" if final_pred == "PNEUMONIA" else "PNEUMONIA"] = 1 - final_conf
return [
gr.update(visible=False), # uploader_column
gr.update(visible=True), # results_column
gr.update(value=result["watermarked_images"]), # result_images
gr.update(value=confidences) # result_label
]
async def refresh_history_table():
records = await get_all_records()
data_for_df = []
if records:
data_for_df = [[r.get('name'), r.get('age'), r.get('prediction_result'), f"{r.get('confidence_score', 0):.2%}", r.get('timestamp').strftime('%Y-%m-%d %H:%M')] for r in records]
return gr.update(value=data_for_df)
# --- Gradio UI Definition ---
css = """
/* --- Professional Dark Theme & Fonts --- */
:root { --primary-hue: 220 !important; --secondary-hue: 210 !important; --neutral-hue: 210 !important; --body-background-fill: #111827 !important; --block-background-fill: #1F2937 !important; --block-border-width: 1px !important; --border-color-accent: #374151 !important; --background-fill-secondary: #1F2937 !important;}
/* --- Header & Title Styling --- */
#app_header { text-align: center; }
#app_title { font-size: 2.8rem !important; font-weight: 700 !important; color: #FFFFFF !important; padding-top: 1rem; }
#app_subtitle { font-size: 1.2rem !important; color: #9CA3AF !important; margin-bottom: 2rem; }
/* --- Layout, Spacing, and Component Styling --- */
#main_container { gap: 2rem; }
#results_gallery { height: 350px !important; }
#results_gallery .gallery-item { height: 330px !important; max-height: 330px !important; padding: 0.25rem !important; background-color: #374151; border: 1px solid #374151 !important; }
#results_gallery .gallery-item img { object-fit: contain !important; }
#bottom_controls { max-width: 600px; margin: 2.5rem auto 1rem auto; }
#bottom_controls .gr-accordion > .gr-block-label { text-align: center !important; display: block !important; }
"""
with gr.Blocks(theme=gr.themes.Default(primary_hue="blue", secondary_hue="blue"), css=css, title="Pneumonia Detection AI") as demo:
with gr.Column() as main_app:
with gr.Column(elem_id="app_header"):
gr.Markdown("# 🩺 Pneumonia Detection AI", elem_id="app_title")
gr.Markdown("An AI-powered tool to assist in the diagnosis of pneumonia.", elem_id="app_subtitle")
with gr.Row(elem_id="main_container"):
with gr.Column(scale=1) as uploader_column:
gr.Markdown("### Upload Patient X-Rays")
image_input = gr.File(label="Upload up to 3 Images", file_count="multiple", file_types=["image"], type="filepath")
with gr.Column(scale=2, visible=False) as results_column:
gr.Markdown("### Analysis Results")
result_images = gr.Gallery(label="Analyzed Images", columns=3, object_fit="contain", height=350, elem_id="results_gallery")
result_label = gr.Label(label="Overall Prediction", num_top_classes=2)
start_over_btn = gr.Button("Start New Analysis", variant="secondary")
with gr.Group(visible=False) as patient_info_modal:
gr.Markdown("## Enter Patient Details", elem_classes="text-center")
patient_name_modal = gr.Textbox(label="Patient Name", placeholder="e.g., John Doe")
patient_age_modal = gr.Number(label="Patient Age", minimum=0, maximum=120, step=1)
with gr.Row():
submit_analysis_btn = gr.Button("Analyze Images", variant="primary")
cancel_btn = gr.Button("Cancel", variant="stop")
with gr.Column(elem_id="bottom_controls"):
with gr.Accordion("About this Tool", open=False):
gr.Markdown(
"""
### MLOps-Powered Pneumonia Detection
This application demonstrates a complete, end-to-end MLOps pipeline for medical image classification. It leverages a state-of-the-art **Vision Transformer (ViT)** model, fine-tuned on a public dataset of chest X-ray images to distinguish between Normal and Pneumonia cases.
---
**Key Features & Technologies:**
* **Model:** Google's `vit-base-patch16-224-in21k`, fine-tuned for high accuracy.
* **MLOps Pipeline:** Reproducible workflow managed by **DVC** for data versioning and **MLflow** for experiment tracking.
* **Database:** Patient and prediction data is stored and managed in a **MongoDB** database for scalability.
* **Frontend:** A responsive and interactive user interface built with **Gradio**.
* **Deployment Ready:** The entire project is containerized and ready for deployment on platforms like Hugging Face Spaces.
**Disclaimer:** This tool is for demonstration and educational purposes only and is **not a substitute for professional medical advice.**
---
**Project Team:**
* **Alyyan Ahmed** - (roles)
* **Munim Akbar** - (roles)
"""
)
with gr.Row():
samples_btn = gr.Button("Try Sample Images")
history_btn = gr.Button("View Patient History")
with gr.Column(visible=False) as history_page:
gr.Markdown("# 📜 Patient Record History", elem_classes="app_title")
with gr.Row():
back_to_main_btn_hist = gr.Button("⬅️ Back to Main App")
refresh_history_btn = gr.Button("Refresh History")
history_df = gr.DataFrame(headers=["Name", "Age", "Prediction", "Confidence", "Date"], row_count=10, interactive=False)
with gr.Column(visible=False) as samples_page:
gr.Markdown("# 🖼️ Sample Image Library", elem_classes="app_title")
gr.Markdown("Click an image to run an anonymous analysis.")
back_to_main_btn_samp = gr.Button("⬅️ Back to Main App")
sample_gallery = gr.Gallery(value=SAMPLE_IMAGES, label="Sample Images", columns=5, height=400)
# --- Event Handling Logic ---
def show_patient_info(files):
return gr.update(visible=True) if files else gr.update(visible=False)
image_input.upload(fn=show_patient_info, inputs=image_input, outputs=patient_info_modal)
async def submit_and_hide_modal(name, age, files):
analysis_results = await process_analysis(name, age, files)
return [
*analysis_results,
gr.update(visible=False) # Hide the modal
]
submit_analysis_btn.click(fn=submit_and_hide_modal, inputs=[patient_name_modal, patient_age_modal, image_input], outputs=[uploader_column, results_column, result_images, result_label, patient_info_modal])
cancel_btn.click(lambda: (gr.update(visible=False), None), None, [patient_info_modal, image_input])
start_over_btn.click(fn=None, js="() => { window.location.reload(); }")
async def handle_sample_click(evt: gr.SelectData):
selected_path = evt.value
analysis_results = await process_analysis("Sample User", 0, [selected_path], is_sample=True)
return [
gr.update(visible=True), # main_app
gr.update(visible=False), # samples_page
*analysis_results
]
sample_gallery.select(handle_sample_click, None, [main_app, samples_page, uploader_column, results_column, result_images, result_label])
all_pages = [main_app, history_page, samples_page]
async def show_history_page_and_refresh():
records_update = await refresh_history_table()
return [gr.update(visible=False), gr.update(visible=True), gr.update(visible=False), records_update]
def show_samples_page():
return [gr.update(visible=False), gr.update(visible=False), gr.update(visible=True)]
def show_main_page():
return [gr.update(visible=True), gr.update(visible=False), gr.update(visible=False)]
history_btn.click(fn=show_history_page_and_refresh, outputs=all_pages + [history_df])
samples_btn.click(fn=show_samples_page, outputs=all_pages)
back_to_main_btn_hist.click(fn=show_main_page, outputs=all_pages)
back_to_main_btn_samp.click(fn=show_main_page, outputs=all_pages)
refresh_history_btn.click(fn=refresh_history_table, outputs=history_df)
demo.load(fn=refresh_history_table, outputs=history_df)
# --- Launch the App ---
if __name__ == "__main__":
demo.launch() |