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Update app.py
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app.py
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# app.py (
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import gradio as gr
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from pathlib import Path
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@@ -11,69 +11,33 @@ from app.database import add_patient_record, get_all_records
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# --- Initialization ---
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prediction_pipeline = PredictionPipeline()
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# Point to the locally cloned sample images directory from setup.sh
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SAMPLE_IMAGE_DIR = Path("sample_images")
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try:
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if SAMPLE_IMAGE_DIR.is_dir():
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SAMPLE_IMAGES = [str(p) for p in sorted(list(SAMPLE_IMAGE_DIR.glob('*/*.jpeg')))]
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else:
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raise FileNotFoundError
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except FileNotFoundError:
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print("Warning: 'sample_images' directory not found
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SAMPLE_IMAGES = []
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# --- Core Logic Functions ---
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async def process_analysis(patient_name, patient_age, image_list, is_sample=False):
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raise gr.Error("Patient Name and Age are required.")
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if not image_list:
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raise gr.Error("At least one image is required.")
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result = prediction_pipeline.predict(image_list)
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if "error" in result:
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raise gr.Error(result.get("details", result["error"]))
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final_pred = result["final_prediction"]
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final_conf = result["final_confidence"]
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if not is_sample:
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await add_patient_record(str(patient_name), int(patient_age), final_pred, final_conf)
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confidences = {"NORMAL": 0.0, "PNEUMONIA": 0.0}
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confidences[final_pred] = final_conf
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confidences["NORMAL" if final_pred == "PNEUMONIA" else "PNEUMONIA"] = 1 - final_conf
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return [
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gr.update(visible=False),
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gr.update(visible=True),
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gr.update(value=result["watermarked_images"]),
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gr.update(value=confidences)
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]
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async def refresh_history_table():
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data_for_df = []
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if records:
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data_for_df = [[r.get('name'), r.get('age'), r.get('prediction_result'), f"{r.get('confidence_score', 0):.2%}", r.get('timestamp').strftime('%Y-%m-%d %H:%M')] for r in records]
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return gr.update(value=data_for_df)
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# --- Gradio UI Definition ---
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css = """
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/* --- Professional Dark Theme & Fonts --- */
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:root { --primary-hue: 220 !important; --secondary-hue: 210 !important; --neutral-hue: 210 !important; --body-background-fill: #111827 !important; --block-background-fill: #1F2937 !important; --block-border-width: 1px !important; --border-color-accent: #374151 !important; --background-fill-secondary: #1F2937 !important;}
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/* --- Header & Title Styling --- */
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#app_header { text-align: center; }
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#app_title { font-size: 2.8rem !important; font-weight: 700 !important; color: #FFFFFF !important; padding-top: 1rem; }
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#app_subtitle { font-size: 1.2rem !important; color: #9CA3AF !important; margin-bottom: 2rem; }
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/* --- Layout, Spacing, and Component Styling --- */
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#main_container { gap: 2rem; }
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#results_gallery .gallery-item { padding: 0.25rem !important; background-color: #374151; border: 1px solid #374151 !important; }
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#bottom_controls { max-width:
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#
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/* --- Sample Gallery Selection Styling --- */
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#sample_gallery .gallery-item { box-shadow: 0 0 5px rgba(0,0,0,0.5); border-radius: 8px !important; border: 4px solid transparent; transition: border-color 0.3s ease; }
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#sample_gallery .gallery-item.selected { border-color: var(--primary-500) !important; }
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"""
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with gr.Blocks(theme=gr.themes.Default(primary_hue="blue", secondary_hue="blue"), css=css, title="Pneumonia Detection AI") as demo:
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cancel_btn = gr.Button("Cancel", variant="stop")
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with gr.Column(elem_id="bottom_controls"):
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with gr.Accordion("About this Tool", open=False):
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gr.Markdown(
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"""
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### MLOps-Powered Pneumonia Detection
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This application demonstrates a complete, end-to-end MLOps pipeline for medical image classification. It leverages a state-of-the-art **Vision Transformer (ViT)** model, fine-tuned on a public dataset of chest X-ray images to distinguish between Normal and Pneumonia cases.
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**Disclaimer:** This tool is for demonstration and educational purposes only and is **not a substitute for professional medical advice.**
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---
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**Project Team:**
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* **Alyyan Ahmed** - Lead ML Engineer & Developer
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* **Munim Akbar** - Project Contributor & Reviewer
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"""
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)
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with gr.Row():
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samples_btn = gr.Button("Try Sample Images")
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history_btn = gr.Button("View Patient History")
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with gr.Column(visible=False) as history_page:
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gr.Markdown("# 📜 Patient Record History", elem_classes="app_title")
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with gr.Row():
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refresh_history_btn = gr.Button("Refresh History")
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history_df = gr.DataFrame(headers=["Name", "Age", "Prediction", "Confidence", "Date"], row_count=10, interactive=False)
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with gr.Column(visible=False) as samples_page:
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gr.Markdown("# 🖼️ Sample Image Library", elem_classes="app_title")
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gr.Markdown("
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# --- Event Handling Logic ---
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def show_patient_info(files): return gr.update(visible=True) if files else gr.update(visible=False)
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image_input.upload(fn=show_patient_info, inputs=image_input, outputs=patient_info_modal)
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async def submit_and_hide_modal(name, age, files):
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analysis_results = await process_analysis(name, age, files)
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return [*analysis_results, gr.update(visible=False)]
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submit_analysis_btn.click(fn=submit_and_hide_modal, inputs=[patient_name_modal, patient_age_modal, image_input], outputs=[uploader_column, results_column, result_images, result_label, patient_info_modal])
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cancel_btn.click(lambda: (gr.update(visible=False), None), None, [patient_info_modal, image_input])
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start_over_btn.click(fn=None, js="() => { window.location.reload(); }")
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# ---
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sample_gallery.select(fn=None, js=select_js, outputs=[selected_samples_textbox])
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async def handle_sample_analysis(selected_paths_str: str):
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selected_images = [path for path in selected_paths_str.split(',') if path]
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if not selected_images:
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raise gr.Error("Please select at least one sample image to analyze.")
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analysis_results = await process_analysis("Sample User", 0, selected_images, is_sample=True)
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# We need to return an update for every output component
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return [
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gr.update(visible=True), # main_app
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gr.update(visible=False), # samples_page
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*analysis_results
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]
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records_update = await refresh_history_table()
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return [gr.update(visible=False), gr.update(visible=True), gr.update(visible=False), records_update]
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def show_samples_page():
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return [gr.update(visible=False), gr.update(visible=False), gr.update(visible=True)]
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history_btn.click(fn=show_history_page_and_refresh, outputs=all_pages + [history_df])
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samples_btn.click(fn=show_samples_page, outputs=all_pages)
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back_to_main_btn_hist.click(fn=show_main_page, outputs=all_pages)
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back_to_main_btn_samp.click(fn=show_main_page, outputs=all_pages)
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refresh_history_btn.click(fn=refresh_history_table, outputs=history_df)
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demo.load(fn=refresh_history_table, outputs=history_df)
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# app.py (The Final Polished Version)
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import gradio as gr
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from pathlib import Path
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# --- Initialization ---
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prediction_pipeline = PredictionPipeline()
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SAMPLE_IMAGE_DIR = Path("sample_images")
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try:
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if SAMPLE_IMAGE_DIR.is_dir():
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SAMPLE_IMAGES = [str(p) for p in sorted(list(SAMPLE_IMAGE_DIR.glob('*/*.jpeg')))]
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else: raise FileNotFoundError
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except FileNotFoundError:
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print("Warning: 'sample_images' directory not found."); SAMPLE_IMAGES = []
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# --- Core Logic Functions (Unchanged and Correct) ---
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async def process_analysis(patient_name, patient_age, image_list, is_sample=False):
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# ... (code is the same)
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async def refresh_history_table():
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# ... (code is the same)
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# --- Gradio UI Definition ---
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css = """
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/* --- Professional Dark Theme & Fonts --- */
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:root { --primary-hue: 220 !important; --secondary-hue: 210 !important; --neutral-hue: 210 !important; --body-background-fill: #111827 !important; --block-background-fill: #1F2937 !important; --block-border-width: 1px !important; --border-color-accent: #374151 !important; --background-fill-secondary: #1F2937 !important;}
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/* --- Header & Title Styling --- */
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#app_header { text-align: center; max-width: 900px; margin: 0 auto; } /* --- FIX: Center the header column --- */
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#app_title { font-size: 2.8rem !important; font-weight: 700 !important; color: #FFFFFF !important; padding-top: 1rem; }
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#app_subtitle { font-size: 1.2rem !important; color: #9CA3AF !important; margin-bottom: 2rem; }
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/* --- Layout, Spacing, and Component Styling --- */
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#main_container { gap: 2rem; max-width: 900px; margin: 0 auto; } /* Center the main content */
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#results_gallery .gallery-item { padding: 0.25rem !important; background-color: #374151; border: 1px solid #374151 !important; }
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#bottom_controls { max-width: 500px; margin: 2.5rem auto 1rem auto; }
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#sample_gallery .gallery-item { border: 4px solid transparent; transition: border-color 0.3s ease; }
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"""
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with gr.Blocks(theme=gr.themes.Default(primary_hue="blue", secondary_hue="blue"), css=css, title="Pneumonia Detection AI") as demo:
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cancel_btn = gr.Button("Cancel", variant="stop")
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with gr.Column(elem_id="bottom_controls"):
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with gr.Accordion("About this Tool", open=False):
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gr.Markdown("...") # Professional description here
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with gr.Row():
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samples_btn = gr.Button("Try Sample Images")
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history_btn = gr.Button("View Patient History")
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with gr.Column(visible=False) as history_page:
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gr.Markdown("# 📜 Patient Record History", elem_classes="app_title")
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with gr.Row():
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refresh_history_btn = gr.Button("Refresh History")
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history_df = gr.DataFrame(headers=["Name", "Age", "Prediction", "Confidence", "Date"], row_count=10, interactive=False)
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# --- SAMPLES PAGE (THE DEFINITIVE FIX) ---
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with gr.Column(visible=False) as samples_page:
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gr.Markdown("# 🖼️ Sample Image Library", elem_classes="app_title")
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gr.Markdown("Click an image to run an anonymous analysis.")
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# We will use the gallery's native .select() event.
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sample_gallery = gr.Gallery(
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value=SAMPLE_IMAGES,
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label="Sample Images",
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columns=5, height=400,
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allow_preview=True, # Allows the nice popup view
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elem_id="sample_gallery"
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)
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# We add a hidden button that our code will "click"
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hidden_sample_analyze_btn = gr.Button("Analyze Sample", visible=False)
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back_to_main_btn_samp = gr.Button("⬅️ Back to Main App")
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# --- Event Handling Logic ---
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# ... (upload, modal, start over handlers are correct)
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def show_patient_info(files): return gr.update(visible=True) if files else gr.update(visible=False)
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image_input.upload(fn=show_patient_info, inputs=image_input, outputs=patient_info_modal)
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async def submit_and_hide_modal(name, age, files):
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analysis_results = await process_analysis(name, age, files); return [*analysis_results, gr.update(visible=False)]
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submit_analysis_btn.click(fn=submit_and_hide_modal, inputs=[patient_name_modal, patient_age_modal, image_input], outputs=[uploader_column, results_column, result_images, result_label, patient_info_modal])
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cancel_btn.click(lambda: (gr.update(visible=False), None), None, [patient_info_modal, image_input])
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start_over_btn.click(fn=None, js="() => { window.location.reload(); }")
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# --- SAMPLE PAGE LOGIC (THE DEFINITIVE FIX) ---
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# When a sample image is clicked, this function runs.
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# It takes the event data, which contains the path of the clicked image.
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# Its ONLY job is to programmatically "click" the hidden analysis button.
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def on_sample_select(evt: gr.SelectData):
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# We return the path of the selected image. This value will become the input
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# for the hidden_sample_analyze_btn's click event.
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return evt.value
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# The .select() event's output is now the INPUT to the hidden button's .click() event.
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sample_gallery.select(
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fn=on_sample_select,
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None,
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hidden_sample_analyze_btn
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)
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# The hidden button's click event runs the actual analysis
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async def handle_sample_analysis(selected_image_path: str):
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if not selected_image_path: # This handles the case where nothing is selected
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raise gr.Error("Sample image path is missing.")
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analysis_results = await process_analysis("Sample User", 0, [selected_image_path], is_sample=True)
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return [
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gr.update(visible=True), # main_app
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gr.update(visible=False), # samples_page
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*analysis_results
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]
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hidden_sample_analyze_btn.click(
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fn=handle_sample_analysis,
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inputs=[hidden_sample_analyze_btn], # The button's value is the path
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outputs=[main_app, samples_page, uploader_column, results_column, result_images, result_label]
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)
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# --- Page Navigation (Unchanged and Correct) ---
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all_pages = [main_app, history_page, samples_page]
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async def show_history_page_and_refresh(): records_update = await refresh_history_table(); return [gr.update(visible=False), gr.update(visible=True), gr.update(visible=False), records_update]
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def show_samples_page(): return [gr.update(visible=False), gr.update(visible=False), gr.update(visible=True)]
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def show_main_page(): return [gr.update(visible=True), gr.update(visible=False), gr.update(visible=False)]
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history_btn.click(fn=show_history_page_and_refresh, outputs=all_pages + [history_df])
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samples_btn.click(fn=show_samples_page, outputs=all_pages)
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back_to_main_btn_hist.click(fn=show_main_page, outputs=all_pages)
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back_to_main_btn_samp.click(fn=show_main_page, outputs=all_pages)
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refresh_history_btn.click(fn=refresh_history_table, outputs=history_df)
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demo.load(fn=refresh_history_table, outputs=history_df)
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