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Update app.py
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app.py
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# app.py (Final Version with
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import gradio as gr
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from pathlib import Path
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import asyncio
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from app.prediction import PredictionPipeline
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@@ -9,65 +10,37 @@ from app.database import add_patient_record, get_all_records
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# --- Initialization ---
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prediction_pipeline = PredictionPipeline()
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SAMPLE_IMAGE_DIR = Path("sample_images")
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try:
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SAMPLE_IMAGES = [str(p) for p in list(SAMPLE_IMAGE_DIR.glob('*/*.jpeg'))]
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except FileNotFoundError:
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print("Warning: 'sample_images' directory not found. Samples will be unavailable.")
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SAMPLE_IMAGES = []
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# --- Core Logic (Async Functions are Correct) ---
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async def process_analysis(patient_name, patient_age, image_list, is_sample=False):
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# ... (
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if not is_sample and (not patient_name or patient_age is None or str(patient_age).strip() == ""):
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if not image_list:
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raise gr.Error("At least one image is required.")
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result = prediction_pipeline.predict(image_list)
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if "error" in result:
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final_pred
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if not is_sample:
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await add_patient_record(str(patient_name), int(patient_age), final_pred, final_conf)
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confidences = {"NORMAL": 0.0, "PNEUMONIA": 0.0}
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confidences[final_pred] = final_conf
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confidences["NORMAL" if final_pred == "PNEUMONIA" else "PNEUMONIA"] = 1 - final_conf
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return [gr.update(visible=False), gr.update(visible=True), gr.update(value=result["watermarked_images"]), gr.update(value=confidences)]
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async def refresh_history_table():
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# ... (
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records = await get_all_records()
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data_for_df = [[r.get('name'), r.get('age'), r.get('prediction_result'), f"{r.get('confidence_score', 0):.2%}", r.get('timestamp').strftime('%Y-%m-%d %H:%M')] for r in records]
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return gr.update(value=data_for_df)
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# --- Gradio UI Definition ---
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css = ""
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/* --- Professional Dark Theme & Fonts --- */
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:root { --primary-hue: 220 !important; --secondary-hue: 210 !important; --neutral-hue: 210 !important; --body-background-fill: #111827 !important; --block-background-fill: #1F2937 !important; --block-border-width: 1px !important; --border-color-accent: #374151 !important; --background-fill-secondary: #1F2937 !important;}
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/* --- Header & Title Styling --- */
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#app_header { text-align: center; }
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#app_title { font-size: 2.8rem !important; font-weight: 700 !important; color: #FFFFFF !important; padding-top: 1rem; }
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#app_subtitle { font-size: 1.2rem !important; color: #9CA3AF !important; margin-bottom: 2rem; }
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/* --- Layout, Spacing, and Component Styling --- */
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#main_container { gap: 2rem; }
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#results_gallery .gallery-item { padding: 0.25rem !important; background-color: #374151; border: 1px solid #374151 !important; }
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#bottom_controls { max-width: 600px; margin: 2.5rem auto 1rem auto; }
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#bottom_controls .gr-accordion > .gr-block-label { text-align: center !important; display: block !important; }
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/* --- FIX: Style the sample gallery for a cleaner look --- */
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#sample_gallery { background-color: transparent !important; border: none !important; }
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#sample_gallery .gallery-item { box-shadow: 0 0 5px rgba(0,0,0,0.5); border-radius: 8px !important; }
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"""
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with gr.Blocks(theme=gr.themes.Default(primary_hue="blue", secondary_hue="blue"), css=css, title="Pneumonia Detection AI") as demo:
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with gr.Column() as main_app:
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# ... (
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with gr.Column(elem_id="app_header"):
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gr.Markdown("# 🩺 Pneumonia Detection AI", elem_id="app_title")
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gr.Markdown("An AI-powered tool to assist in the diagnosis of pneumonia.", elem_id="app_subtitle")
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@@ -89,48 +62,40 @@ with gr.Blocks(theme=gr.themes.Default(primary_hue="blue", secondary_hue="blue")
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cancel_btn = gr.Button("Cancel", variant="stop")
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with gr.Column(elem_id="bottom_controls"):
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with gr.Accordion("About this Tool", open=False):
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"""
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### MLOps-Powered Pneumonia Detection
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(Your professional description here)
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---
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**Project Team:** Alyyan Ahmed & Munim Akbar
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"""
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)
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with gr.Row():
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samples_btn = gr.Button("Try Sample Images")
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history_btn = gr.Button("View Patient History")
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with gr.Column(visible=False) as history_page:
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# ... (
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gr.Markdown("# 📜 Patient Record History", elem_classes="app_title")
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with gr.Row():
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back_to_main_btn_hist = gr.Button("⬅️ Back to Main App")
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refresh_history_btn = gr.Button("Refresh History")
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history_df = gr.DataFrame(headers=["Name", "Age", "Prediction", "Confidence", "Date"], row_count=10, interactive=False)
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with gr.Column(visible=False) as samples_page:
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gr.Markdown("# 🖼️ Sample Image Library", elem_classes="app_title")
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gr.Markdown("Select up to 3 images, then click 'Analyze Selected Samples'.")
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#
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value=SAMPLE_IMAGES if SAMPLE_IMAGES else ["https://placehold.co/400x400/2F3136/FFFFFF/png?text=Samples\nNot+Found"],
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label="Sample Images",
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)
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with gr.Row():
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analyze_samples_btn = gr.Button("Analyze Selected Samples", variant="primary")
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back_to_main_btn_samp = gr.Button("⬅️ Back to Main App")
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# --- Event Handling Logic ---
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image_input.upload(fn=show_patient_info, inputs=image_input, outputs=patient_info_modal)
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async def submit_and_hide_modal(name, age, files):
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analysis_results = await process_analysis(name, age, files)
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return [*analysis_results, gr.update(visible=False)]
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@@ -138,34 +103,32 @@ with gr.Blocks(theme=gr.themes.Default(primary_hue="blue", secondary_hue="blue")
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cancel_btn.click(lambda: (gr.update(visible=False), None), None, [patient_info_modal, image_input])
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start_over_btn.click(fn=None, js="() => { window.location.reload(); }")
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# ---
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async def handle_sample_analysis(selected_images: list):
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if len(selected_images) > 3:
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raise gr.Error("Please select no more than 3 sample images.")
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analysis_results = await process_analysis("Sample User", 0, selected_images, is_sample=True)
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return {
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main_app: gr.update(visible=True),
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samples_page: gr.update(visible=False),
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uploader_column: analysis_results[0],
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results_column: analysis_results[1],
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result_images: analysis_results[2],
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result_label: analysis_results[3],
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}
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analyze_samples_btn.click(fn=handle_sample_analysis, inputs=[
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# ... (Page Navigation is
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all_pages = [main_app, history_page, samples_page]
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async def show_history_page_and_refresh():
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records_update = await refresh_history_table()
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return [gr.update(visible=False), gr.update(visible=True), gr.update(visible=False), records_update]
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def show_samples_page():
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def show_main_page():
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return [gr.update(visible=True), gr.update(visible=False), gr.update(visible=False)]
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history_btn.click(fn=show_history_page_and_refresh, outputs=all_pages + [history_df])
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samples_btn.click(fn=show_samples_page, outputs=all_pages)
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back_to_main_btn_hist.click(fn=show_main_page, outputs=all_pages)
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# app.py (Final Version with Checkbox Samples and Watermark Fix)
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import gradio as gr
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from pathlib import Path
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from huggingface_hub import snapshot_download
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import asyncio
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from app.prediction import PredictionPipeline
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# --- Initialization ---
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prediction_pipeline = PredictionPipeline()
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HF_DATASET_REPO = "ALYYAN/chest-xray-pneumonia-samples"
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try:
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SAMPLE_IMAGE_DIR = Path(snapshot_download(repo_id=HF_DATASET_REPO, repo_type="dataset"))
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SAMPLE_IMAGES = [str(p) for p in list(SAMPLE_IMAGE_DIR.glob('*/*.jpeg'))]
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except Exception as e:
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print(f"Could not download sample images: {e}")
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SAMPLE_IMAGES = []
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# --- Core Logic (Async Functions - Unchanged) ---
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async def process_analysis(patient_name, patient_age, image_list, is_sample=False):
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# ... (code is the same)
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if not is_sample and (not patient_name or patient_age is None or str(patient_age).strip() == ""): raise gr.Error("Patient Name and Age are required.")
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if not image_list: raise gr.Error("At least one image is required.")
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result = prediction_pipeline.predict(image_list)
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if "error" in result: raise gr.Error(result["error"])
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final_pred, final_conf = result["final_prediction"], result["final_confidence"]
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if not is_sample: await add_patient_record(str(patient_name), int(patient_age), final_pred, final_conf)
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confidences = {"NORMAL": 0.0, "PNEUMONIA": 0.0}; confidences[final_pred] = final_conf; confidences["NORMAL" if final_pred == "PNEUMONIA" else "PNEUMONIA"] = 1 - final_conf
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return [gr.update(visible=False), gr.update(visible=True), gr.update(value=result["watermarked_images"]), gr.update(value=confidences)]
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async def refresh_history_table():
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# ... (code is the same)
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records = await get_all_records()
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data = [[r.get('name'), r.get('age'), r.get('prediction_result'), f"{r.get('confidence_score', 0):.2%}", r.get('timestamp').strftime('%Y-%m-%d %H:%M')] for r in records] if records else []
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return gr.update(value=data)
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# --- Gradio UI Definition ---
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css = "..." # (CSS is the same as the previous correct version)
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with gr.Blocks(theme=gr.themes.Default(primary_hue="blue", secondary_hue="blue"), css=css, title="Pneumonia Detection AI") as demo:
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with gr.Column() as main_app:
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# ... (Main page layout is the same)
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with gr.Column(elem_id="app_header"):
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gr.Markdown("# 🩺 Pneumonia Detection AI", elem_id="app_title")
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gr.Markdown("An AI-powered tool to assist in the diagnosis of pneumonia.", elem_id="app_subtitle")
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cancel_btn = gr.Button("Cancel", variant="stop")
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with gr.Column(elem_id="bottom_controls"):
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with gr.Accordion("About this Tool", open=False):
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gr.Markdown("...") # (Your professional description here)
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with gr.Row():
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samples_btn = gr.Button("Try Sample Images")
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history_btn = gr.Button("View Patient History")
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with gr.Column(visible=False) as history_page:
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# ... (History page layout is the same)
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gr.Markdown("# 📜 Patient Record History", elem_classes="app_title")
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with gr.Row():
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back_to_main_btn_hist = gr.Button("⬅️ Back to Main App")
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refresh_history_btn = gr.Button("Refresh History")
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history_df = gr.DataFrame(headers=["Name", "Age", "Prediction", "Confidence", "Date"], row_count=10, interactive=False)
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# --- SAMPLES PAGE (THE FIX) ---
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with gr.Column(visible=False) as samples_page:
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gr.Markdown("# 🖼️ Sample Image Library", elem_classes="app_title")
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gr.Markdown("Select up to 3 images, then click 'Analyze Selected Samples'.")
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# Use a CheckboxGroup with images as choices
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sample_checkboxes = gr.CheckboxGroup(
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label="Sample Images",
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choices=[(Image.open(p), p) for p in SAMPLE_IMAGES], # Tuple of (PIL Image for display, path for value)
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type="value"
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)
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with gr.Row():
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analyze_samples_btn = gr.Button("Analyze Selected Samples", variant="primary")
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back_to_main_btn_samp = gr.Button("⬅️ Back to Main App")
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# --- Event Handling Logic ---
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# ... (upload, modal, start_over handlers are correct)
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def show_patient_info(files): return gr.update(visible=True) if files else gr.update(visible=False)
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image_input.upload(fn=show_patient_info, inputs=image_input, outputs=patient_info_modal)
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async def submit_and_hide_modal(name, age, files):
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analysis_results = await process_analysis(name, age, files)
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return [*analysis_results, gr.update(visible=False)]
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cancel_btn.click(lambda: (gr.update(visible=False), None), None, [patient_info_modal, image_input])
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start_over_btn.click(fn=None, js="() => { window.location.reload(); }")
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# --- SAMPLE PAGE LOGIC (THE FIX) ---
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async def handle_sample_analysis(selected_images: list):
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# selected_images is now a list of file paths from the checkbox group
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if not selected_images: raise gr.Error("Please select at least one sample image.")
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if len(selected_images) > 3: raise gr.Error("Please select no more than 3 sample images.")
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analysis_results = await process_analysis("Sample User", 0, selected_images, is_sample=True)
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return {
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main_app: gr.update(visible=True),
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samples_page: gr.update(visible=False),
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# Unpack dictionary updates for specific components
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uploader_column: analysis_results[0],
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results_column: analysis_results[1],
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result_images: analysis_results[2],
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result_label: analysis_results[3],
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}
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analyze_samples_btn.click(fn=handle_sample_analysis, inputs=[sample_checkboxes], outputs=[main_app, samples_page, uploader_column, results_column, result_images, result_label])
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# ... (Page Navigation is correct)
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all_pages = [main_app, history_page, samples_page]
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async def show_history_page_and_refresh():
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records_update = await refresh_history_table()
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return [gr.update(visible=False), gr.update(visible=True), gr.update(visible=False), records_update]
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def show_samples_page(): return [gr.update(visible=False), gr.update(visible=False), gr.update(visible=True)]
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def show_main_page(): return [gr.update(visible=True), gr.update(visible=False), gr.update(visible=False)]
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history_btn.click(fn=show_history_page_and_refresh, outputs=all_pages + [history_df])
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samples_btn.click(fn=show_samples_page, outputs=all_pages)
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back_to_main_btn_hist.click(fn=show_main_page, outputs=all_pages)
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