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Update app.py
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app.py
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# app.py (The
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import gradio as gr
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from pathlib import Path
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import asyncio
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from PIL import Image
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# Import backend components
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from app.prediction import PredictionPipeline
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from app.database import add_patient_record, get_all_records
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# --- Initialization ---
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prediction_pipeline = PredictionPipeline()
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# Point to the locally cloned sample images directory from setup.sh
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SAMPLE_IMAGE_DIR = Path("sample_images")
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try:
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if SAMPLE_IMAGE_DIR.is_dir():
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# Separate the lists of images for the two-column layout
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NORMAL_SAMPLES = [str(p) for p in sorted(list((SAMPLE_IMAGE_DIR / 'NORMAL').glob('*.jpeg')))]
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PNEUMONIA_SAMPLES = [str(p) for p in sorted(list((SAMPLE_IMAGE_DIR / 'PNEUMONIA').glob('*.jpeg')))]
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else:
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raise FileNotFoundError
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except FileNotFoundError:
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print("Warning: 'sample_images' directory not found
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NORMAL_SAMPLES, PNEUMONIA_SAMPLES = [], []
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# --- Core Logic (Async Functions) ---
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async def process_analysis(patient_name, patient_age, image_list):
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css = """
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/* --- Professional Dark Theme & Fonts --- */
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:root { --primary-hue: 220 !important; --secondary-hue: 210 !important; --neutral-hue: 210 !important; --body-background-fill: #111827 !important; --block-background-fill: #1F2337 !important; --block-border-width: 1px !important; --border-color-accent: #374151 !important; --background-fill-secondary: #1F2937 !important;}
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/* --- Header & Title Styling --- */
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#app_header { text-align: center; max-width:
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#app_title { font-size:
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#app_subtitle { font-size: 1.25rem !important; color: #9CA3AF !important; margin-bottom: 2rem; }
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/* --- Layout and Spacing --- */
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#main_container { gap: 2rem; max-width:
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#results_gallery .gallery-item { padding: 0.25rem !important; background-color: #374151; border: 1px solid #374151 !important; }
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#bottom_controls { max-width: 500px; margin: 2.5rem auto 1rem auto; }
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"""
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This application demonstrates a complete, end-to-end MLOps pipeline for medical image classification. It leverages a state-of-the-art **Vision Transformer (ViT)** model, fine-tuned on a public dataset of chest X-ray images to distinguish between Normal and Pneumonia cases.
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**Disclaimer:** This tool is for demonstration and educational purposes only and is **not a substitute for professional medical advice.**
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---
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**Project Team:**
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* **Alyyan Ahmed** - ML Engineer & Developer
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* **Munim Akbar** - ML Engineer & Developer
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"""
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)
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with gr.Row():
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samples_btn = gr.Button("Try Sample Images")
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history_btn = gr.Button("View Patient History")
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refresh_history_btn = gr.Button("Refresh History")
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history_df = gr.DataFrame(headers=["Name", "Age", "Prediction", "Confidence", "Date"], row_count=10, interactive=False)
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with gr.Column(visible=False) as samples_page:
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gr.Markdown("# 🖼️ Sample Image Library", elem_classes="app_title")
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gr.Markdown("You can
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back_to_main_btn_samp = gr.Button("⬅️ Back to Main App")
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with gr.Row():
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with gr.Column():
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gr.Markdown("### Normal Cases")
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with gr.Column():
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gr.Markdown("### Pneumonia Cases")
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for
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image_input.upload(fn=show_patient_info, inputs=image_input, outputs=patient_info_modal)
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async def submit_and_hide_modal(name, age, files):
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analysis_results = await process_analysis(name, age, files)
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return [*analysis_results, gr.update(visible=False)]
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submit_analysis_btn.click(fn=submit_and_hide_modal, inputs=[patient_name_modal, patient_age_modal, image_input], outputs=[uploader_column, results_column, result_images, result_label, patient_info_modal])
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cancel_btn.click(lambda: (gr.update(visible=False), None), None, [patient_info_modal, image_input])
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start_over_btn.click(fn=None, js="() => { window.location.reload(); }")
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all_pages = [main_app, history_page, samples_page]
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async def show_history_page_and_refresh():
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records_update = await refresh_history_table()
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def show_samples_page():
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return [gr.update(visible=False), gr.update(visible=False), gr.update(visible=True)]
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def show_main_page():
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return [gr.update(visible=True), gr.update(visible=False), gr.update(visible=False)]
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history_btn.click(fn=show_history_page_and_refresh, outputs=all_pages + [history_df])
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samples_btn.click(fn=show_samples_page, outputs=all_pages)
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back_to_main_btn_hist.click(fn=show_main_page, outputs=all_pages)
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# app.py (The Final Polished Version)
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import gradio as gr
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from pathlib import Path
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import asyncio
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# Import backend components
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from app.prediction import PredictionPipeline
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from app.database import add_patient_record, get_all_records
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# --- Initialization ---
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prediction_pipeline = PredictionPipeline()
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SAMPLE_IMAGE_DIR = Path("sample_images")
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try:
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if SAMPLE_IMAGE_DIR.is_dir():
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NORMAL_SAMPLES = [str(p) for p in sorted(list((SAMPLE_IMAGE_DIR / 'NORMAL').glob('*.jpeg')))]
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PNEUMONIA_SAMPLES = [str(p) for p in sorted(list((SAMPLE_IMAGE_DIR / 'PNEUMONIA').glob('*.jpeg')))]
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else: raise FileNotFoundError
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except FileNotFoundError:
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print("Warning: 'sample_images' directory not found."); NORMAL_SAMPLES, PNEUMONIA_SAMPLES = [], []
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# --- Core Logic (Async Functions) ---
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async def process_analysis(patient_name, patient_age, image_list):
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css = """
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/* --- Professional Dark Theme & Fonts --- */
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:root { --primary-hue: 220 !important; --secondary-hue: 210 !important; --neutral-hue: 210 !important; --body-background-fill: #111827 !important; --block-background-fill: #1F2337 !important; --block-border-width: 1px !important; --border-color-accent: #374151 !important; --background-fill-secondary: #1F2937 !important;}
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/* --- Header & Title Styling (THE FIX) --- */
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#app_header { text-align: center; max-width: 1000px; margin: 0 auto; }
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#app_title { font-size: 3.2rem !important; font-weight: 800 !important; color: #FFFFFF !important; padding-top: 1rem; }
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#app_subtitle { font-size: 1.25rem !important; color: #9CA3AF !important; margin-bottom: 2rem; }
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/* --- Layout and Spacing --- */
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#main_container { gap: 2rem; max-width: 800px; margin: 0 auto; }
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#results_gallery .gallery-item { padding: 0.25rem !important; background-color: #374151; border: 1px solid #374151 !important; }
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#bottom_controls { max-width: 500px; margin: 2.5rem auto 1rem auto; }
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"""
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This application demonstrates a complete, end-to-end MLOps pipeline for medical image classification. It leverages a state-of-the-art **Vision Transformer (ViT)** model, fine-tuned on a public dataset of chest X-ray images to distinguish between Normal and Pneumonia cases.
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**Disclaimer:** This tool is for demonstration and educational purposes only and is **not a substitute for professional medical advice.**
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---
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**Project Team:**
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* **Alyyan Ahmed** - ML Engineer & Developer
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* **Munim Akbar** - ML Engineer & Developer
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"""
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) # Professional description here
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with gr.Row():
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samples_btn = gr.Button("Try Sample Images")
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history_btn = gr.Button("View Patient History")
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refresh_history_btn = gr.Button("Refresh History")
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history_df = gr.DataFrame(headers=["Name", "Age", "Prediction", "Confidence", "Date"], row_count=10, interactive=False)
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# --- SAMPLES PAGE (DEFINITIVE REDESIGN) ---
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with gr.Column(visible=False) as samples_page:
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gr.Markdown("# 🖼️ Sample Image Library", elem_classes="app_title")
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gr.Markdown("You can right-click and 'Save Image As...' to download these samples for testing on the main page.")
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back_to_main_btn_samp = gr.Button("⬅️ Back to Main App")
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with gr.Row():
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with gr.Column():
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gr.Markdown("### Normal Cases")
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# Use a Gallery to display the images visually
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gr.Gallery(
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value=NORMAL_SAMPLES,
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label="Normal X-Rays",
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columns=5,
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object_fit="cover", # 'cover' often looks better for galleries
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height="auto"
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)
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with gr.Column():
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gr.Markdown("### Pneumonia Cases")
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# Use a Gallery for the pneumonia samples as well
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gr.Gallery(
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value=PNEUMONIA_SAMPLES,
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label="Pneumonia X-Rays",
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columns=5,
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object_fit="cover",
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height="auto"
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)
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# --- Event Handling Logic (Unchanged and Correct) ---
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def show_patient_info(files): return gr.update(visible=True) if files else gr.update(visible=False)
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image_input.upload(fn=show_patient_info, inputs=image_input, outputs=patient_info_modal)
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async def submit_and_hide_modal(name, age, files):
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analysis_results = await process_analysis(name, age, files); return [*analysis_results, gr.update(visible=False)]
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submit_analysis_btn.click(fn=submit_and_hide_modal, inputs=[patient_name_modal, patient_age_modal, image_input], outputs=[uploader_column, results_column, result_images, result_label, patient_info_modal])
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cancel_btn.click(lambda: (gr.update(visible=False), None), None, [patient_info_modal, image_input])
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start_over_btn.click(fn=None, js="() => { window.location.reload(); }")
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all_pages = [main_app, history_page, samples_page]
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async def show_history_page_and_refresh():
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records_update = await refresh_history_table(); return [gr.update(visible=False), gr.update(visible=True), gr.update(visible=False), records_update]
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def show_samples_page(): return [gr.update(visible=False), gr.update(visible=False), gr.update(visible=True)]
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def show_main_page(): return [gr.update(visible=True), gr.update(visible=False), gr.update(visible=False)]
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history_btn.click(fn=show_history_page_and_refresh, outputs=all_pages + [history_df])
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samples_btn.click(fn=show_samples_page, outputs=all_pages)
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back_to_main_btn_hist.click(fn=show_main_page, outputs=all_pages)
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