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Update app.py
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app.py
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@@ -1,29 +1,26 @@
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# app.py (Final Version with
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import gradio as gr
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from pathlib import Path
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import asyncio
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from PIL import Image
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from app.prediction import PredictionPipeline
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from app.database import add_patient_record, get_all_records
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# --- Initialization ---
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prediction_pipeline = PredictionPipeline()
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SAMPLE_IMAGE_DIR = Path("sample_images")
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try:
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SAMPLE_IMAGES = [str(p) for p in sorted(list(SAMPLE_IMAGE_DIR.glob('*/*.jpeg')))]
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except FileNotFoundError:
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print("Warning: 'sample_images' directory not found or is empty. Samples will be unavailable.")
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SAMPLE_IMAGES = []
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# --- Core Logic Functions (Unchanged and Correct) ---
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async def process_analysis(patient_name, patient_age, image_list, is_sample=False):
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# ... (code is the same)
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if not is_sample and (not patient_name or patient_age is None): raise gr.Error("Patient Name and Age are required.")
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if not image_list: raise gr.Error("At least one image is required.")
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result = prediction_pipeline.predict(image_list)
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@@ -32,9 +29,7 @@ async def process_analysis(patient_name, patient_age, image_list, is_sample=Fals
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if not is_sample: await add_patient_record(str(patient_name), int(patient_age), final_pred, final_conf)
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confidences = {"NORMAL": 0.0, "PNEUMONIA": 0.0}; confidences[final_pred] = final_conf; confidences["NORMAL" if final_pred == "PNEUMONIA" else "PNEUMONIA"] = 1 - final_conf
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return [gr.update(visible=False), gr.update(visible=True), gr.update(value=result["watermarked_images"]), gr.update(value=confidences)]
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async def refresh_history_table():
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# ... (code is the same)
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records = await get_all_records()
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data = [[r.get('name'), r.get('age'), r.get('prediction_result'), f"{r.get('confidence_score', 0):.2%}", r.get('timestamp').strftime('%Y-%m-%d %H:%M')] for r in records] if records else []
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return gr.update(value=data)
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@@ -58,6 +53,10 @@ css = """
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"""
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with gr.Blocks(theme=gr.themes.Default(primary_hue="blue", secondary_hue="blue"), css=css, title="Pneumonia Detection AI") as demo:
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with gr.Column() as main_app:
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# ... (Main page layout is the same)
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with gr.Column(elem_id="app_header"):
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@@ -85,9 +84,7 @@ with gr.Blocks(theme=gr.themes.Default(primary_hue="blue", secondary_hue="blue")
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with gr.Row():
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samples_btn = gr.Button("Try Sample Images")
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history_btn = gr.Button("View Patient History")
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with gr.Column(visible=False) as history_page:
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# ... (History page layout is the same)
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gr.Markdown("# 📜 Patient Record History", elem_classes="app_title")
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with gr.Row():
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back_to_main_btn_hist = gr.Button("⬅️ Back to Main App")
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@@ -97,54 +94,95 @@ with gr.Blocks(theme=gr.themes.Default(primary_hue="blue", secondary_hue="blue")
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# --- SAMPLES PAGE (THE DEFINITIVE FIX) ---
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with gr.Column(visible=False) as samples_page:
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gr.Markdown("# 🖼️ Sample Image Library", elem_classes="app_title")
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gr.Markdown("Select up to 3 images, then click 'Analyze'.")
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#
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label="Sample Images",
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type="value",
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elem_id="sample_gallery" # Use the gallery CSS
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)
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with gr.Row():
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analyze_samples_btn = gr.Button("Analyze Selected Samples", variant="primary")
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back_to_main_btn_samp = gr.Button("⬅️ Back to Main App")
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# --- Event Handling Logic ---
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# ... (upload, modal, start over handlers are correct)
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def show_patient_info(files): return gr.update(visible=True) if files else gr.update(visible=False)
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image_input.upload(fn=show_patient_info, inputs=image_input, outputs=patient_info_modal)
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async def submit_and_hide_modal(name, age, files):
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analysis_results = await process_analysis(name, age, files)
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return [*analysis_results, gr.update(visible=False)]
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submit_analysis_btn.click(fn=submit_and_hide_modal, inputs=[patient_name_modal, patient_age_modal, image_input], outputs=[uploader_column, results_column, result_images, result_label, patient_info_modal])
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cancel_btn.click(lambda: (gr.update(visible=False), None), None, [patient_info_modal, image_input])
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start_over_btn.click(fn=None, js="() => { window.location.reload(); }")
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# --- SAMPLE PAGE LOGIC (THE FIX) ---
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if not selected_images: raise gr.Error("Please select at least one sample image.")
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if len(selected_images) > 3: raise gr.Error("Please select no more than 3 sample images.")
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analysis_results = await process_analysis("Sample User", 0, selected_images, is_sample=True)
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gr.update(visible=
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# ... (Page Navigation is correct)
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all_pages = [main_app, history_page, samples_page]
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async def show_history_page_and_refresh():
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records_update = await refresh_history_table()
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return [gr.update(visible=False), gr.update(visible=True), gr.update(visible=False), records_update]
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def show_samples_page(): return [gr.update(visible=False), gr.update(visible=False), gr.update(visible=True)]
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def show_main_page(): return [gr.update(visible=True), gr.update(visible=False), gr.update(visible=False)]
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history_btn.click(fn=show_history_page_and_refresh, outputs=all_pages + [history_df])
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# app.py (Final Version with Working Sample Gallery)
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import gradio as gr
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from pathlib import Path
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from huggingface_hub import snapshot_download
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import asyncio
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from app.prediction import PredictionPipeline
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from app.database import add_patient_record, get_all_records
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# --- Initialization ---
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prediction_pipeline = PredictionPipeline()
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HF_DATASET_REPO = "ALYYAN/chest-xray-pneumonia-samples"
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try:
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SAMPLE_IMAGE_DIR = Path(snapshot_download(repo_id=HF_DATASET_REPO, repo_type="dataset"))
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SAMPLE_IMAGES = [str(p) for p in sorted(list(SAMPLE_IMAGE_DIR.glob('*/*.jpeg')))]
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except Exception as e:
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print(f"Could not download sample images: {e}")
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SAMPLE_IMAGES = []
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# --- Core Logic Functions (Unchanged and Correct) ---
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# ... (process_analysis and refresh_history_table are the same as the last working version)
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async def process_analysis(patient_name, patient_age, image_list, is_sample=False):
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if not is_sample and (not patient_name or patient_age is None): raise gr.Error("Patient Name and Age are required.")
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if not image_list: raise gr.Error("At least one image is required.")
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result = prediction_pipeline.predict(image_list)
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if not is_sample: await add_patient_record(str(patient_name), int(patient_age), final_pred, final_conf)
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confidences = {"NORMAL": 0.0, "PNEUMONIA": 0.0}; confidences[final_pred] = final_conf; confidences["NORMAL" if final_pred == "PNEUMONIA" else "PNEUMONIA"] = 1 - final_conf
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return [gr.update(visible=False), gr.update(visible=True), gr.update(value=result["watermarked_images"]), gr.update(value=confidences)]
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async def refresh_history_table():
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records = await get_all_records()
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data = [[r.get('name'), r.get('age'), r.get('prediction_result'), f"{r.get('confidence_score', 0):.2%}", r.get('timestamp').strftime('%Y-%m-%d %H:%M')] for r in records] if records else []
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return gr.update(value=data)
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"""
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with gr.Blocks(theme=gr.themes.Default(primary_hue="blue", secondary_hue="blue"), css=css, title="Pneumonia Detection AI") as demo:
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# --- State to track selected sample images ---
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selected_samples = gr.State([])
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# --- UI LAYOUT (Unchanged) ---
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with gr.Column() as main_app:
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# ... (Main page layout is the same)
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with gr.Column(elem_id="app_header"):
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with gr.Row():
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samples_btn = gr.Button("Try Sample Images")
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history_btn = gr.Button("View Patient History")
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with gr.Column(visible=False) as history_page:
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gr.Markdown("# 📜 Patient Record History", elem_classes="app_title")
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with gr.Row():
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back_to_main_btn_hist = gr.Button("⬅️ Back to Main App")
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# --- SAMPLES PAGE (THE DEFINITIVE FIX) ---
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with gr.Column(visible=False) as samples_page:
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gr.Markdown("# 🖼️ Sample Image Library", elem_classes="app_title")
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gr.Markdown("Select up to 3 images by clicking on them, then click 'Analyze'.")
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# This gallery will show the images
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sample_gallery = gr.Gallery(
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value=SAMPLE_IMAGES,
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label="Sample Images",
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columns=5, height=400,
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elem_id="sample_gallery"
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)
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# This hidden textbox will store the list of selected file paths
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selected_samples_textbox = gr.Textbox(visible=False)
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with gr.Row():
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analyze_samples_btn = gr.Button("Analyze Selected Samples", variant="primary")
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back_to_main_btn_samp = gr.Button("⬅️ Back to Main App")
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# --- Event Handling Logic ---
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# ... (handlers for main upload workflow are correct)
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def show_patient_info(files): return gr.update(visible=True) if files else gr.update(visible=False)
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image_input.upload(fn=show_patient_info, inputs=image_input, outputs=patient_info_modal)
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async def submit_and_hide_modal(name, age, files):
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analysis_results = await process_analysis(name, age, files); return [*analysis_results, gr.update(visible=False)]
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submit_analysis_btn.click(fn=submit_and_hide_modal, inputs=[patient_name_modal, patient_age_modal, image_input], outputs=[uploader_column, results_column, result_images, result_label, patient_info_modal])
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cancel_btn.click(lambda: (gr.update(visible=False), None), None, [patient_info_modal, image_input])
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start_over_btn.click(fn=None, js="() => { window.location.reload(); }")
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# --- SAMPLE PAGE LOGIC (THE FIX) ---
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# JavaScript to handle multi-select on the gallery
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# When an image is clicked, this JS will add/remove its path from the hidden textbox
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# and add/remove a 'selected' class for a visual border.
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select_js = """
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(evt) => {
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const gallery = document.querySelector('#sample_gallery .grid-container');
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const clicked_img = gallery.children[evt.index];
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const selected_paths_input = document.querySelector('#selected_samples_textbox textarea');
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let selected_paths = selected_paths_input.value ? selected_paths_input.value.split(',') : [];
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const current_path = clicked_img.querySelector('img').alt;
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if (clicked_img.classList.contains('selected')) {
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clicked_img.classList.remove('selected');
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selected_paths = selected_paths.filter(p => p !== current_path);
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} else {
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if (selected_paths.length < 3) {
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clicked_img.classList.add('selected');
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selected_paths.push(current_path);
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} else {
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// This is a simple browser alert. Gradio's gr.Warning is better for the final check.
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alert("You can select a maximum of 3 images.");
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}
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}
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// Return the updated list of paths to the hidden textbox
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return selected_paths.join(',');
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}
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"""
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# We need to add a little CSS for the selection border
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demo.css += "#sample_gallery .gallery-item.selected { border: 4px solid var(--primary-500) !important; }"
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# Hidden textbox to store the paths
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selected_samples_textbox = gr.Textbox(value="", visible=False, elem_id="selected_samples_textbox")
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sample_gallery.select(fn=None, _js=select_js, outputs=[selected_samples_textbox])
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async def handle_sample_analysis(selected_paths_str: str):
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# The input is now a comma-separated string of paths from our hidden textbox
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selected_images = selected_paths_str.split(',') if selected_paths_str else []
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if not selected_images: raise gr.Error("Please select at least one sample image.")
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if len(selected_images) > 3: raise gr.Error("Please select no more than 3 sample images.")
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analysis_results = await process_analysis("Sample User", 0, selected_images, is_sample=True)
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return {
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main_app: gr.update(visible=True),
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samples_page: gr.update(visible=False),
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# Unpack dictionary updates for specific components
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uploader_column: analysis_results[0],
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results_column: analysis_results[1],
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result_images: analysis_results[2],
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result_label: analysis_results[3],
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}
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analyze_samples_btn.click(fn=handle_sample_analysis, inputs=[selected_samples_textbox], outputs=[main_app, samples_page, uploader_column, results_column, result_images, result_label])
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# ... (Page Navigation is correct)
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all_pages = [main_app, history_page, samples_page]
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async def show_history_page_and_refresh(): records_update = await refresh_history_table(); return [gr.update(visible=False), gr.update(visible=True), gr.update(visible=False), records_update]
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def show_samples_page(): return [gr.update(visible=False), gr.update(visible=False), gr.update(visible=True)]
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def show_main_page(): return [gr.update(visible=True), gr.update(visible=False), gr.update(visible=False)]
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history_btn.click(fn=show_history_page_and_refresh, outputs=all_pages + [history_df])
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