removal of creds

app.py

@@ -41,7 +41,8 @@ if "experiment" not in st.session_state:
         "growth_rate_calculating": False, 
         "stirring": False, 
         "od_reading": False, 
-        "led_automation": False
+        "led_automation": False,
+        "dosing_automation": False
     }
     st.session_state["client"] = None
 
@@ -59,11 +60,11 @@ if use_custom_credentials:
         # hivemq_port = st.number_input("HiveMQ Port", min_value=1, max_value=65535, step=1, value=8883)
         # reactor = st.text_input("PioReactor")
 
-        hivemq_host = st.text_input("HiveMQ Host", "9bb69fc9bf6b4092abc4c92d76e602cd.s1.eu.hivemq.cloud",type="password")
-        hivemq_username = st.text_input("HiveMQ Username", "Website",type="password")
-        hivemq_password = st.text_input("HiveMQ Password", "Abcabcabc1",type="password")
+        hivemq_host = st.text_input("HiveMQ Host", type="password")
+        hivemq_username = st.text_input("HiveMQ Username", type="password")
+        hivemq_password = st.text_input("HiveMQ Password", type="password")
         hivemq_port = st.number_input("HiveMQ Port", min_value=1, max_value=65535, step=1, value=8883)
-        reactor = st.text_input("PioReactor", "pio1")
+        reactor = st.text_input("PioReactor")
 
         submit_button = st.form_submit_button("Connect")
 else:
@@ -277,11 +278,12 @@ if submit_button:
         if st.session_state["jobs"]["stirring"]:
             print(rpm_mqtt)
             st.session_state["stirring_speed"] = rpm_mqtt
-        
-        st.session_state["channel_a"] = int(led_mqtt.get("A", 0))
-        st.session_state["channel_b"] = int(led_mqtt.get("B", 0))
-        st.session_state["channel_c"] = int(led_mqtt.get("C", 0))   
-        st.session_state["channel_d"] = int(led_mqtt.get("D", 0))
+
+        if led_mqtt is not None:
+            st.session_state["channel_a"] = int(led_mqtt.get("A", 0))
+            st.session_state["channel_b"] = int(led_mqtt.get("B", 0))
+            st.session_state["channel_c"] = int(led_mqtt.get("C", 0))   
+            st.session_state["channel_d"] = int(led_mqtt.get("D", 0))
 
         st.session_state["experiments"] = experiments
     
@@ -293,6 +295,36 @@ if submit_button:
 if st.session_state["experiment"] is not None:
     st.title(f"Experiment: {st.session_state['experiment']}")
 
+    st.header("Running Jobs")
+        
+    cols = st.columns(6)
+
+    with cols[0]:
+        st.write("Temperature")
+        st.write(st.session_state["jobs"]["temperature_automation"])
+
+    with cols[1]:
+        st.write("Growth Rate")
+        st.write(st.session_state["jobs"]["growth_rate_calculating"])
+
+    with cols[2]:
+        st.write("Stirring")
+        st.write(st.session_state["jobs"]["stirring"])
+
+    with cols[3]:
+        st.write("OD Reading")
+        st.write(st.session_state["jobs"]["od_reading"])
+
+    with cols[4]:
+        st.write("LED")
+        st.write(st.session_state["jobs"]["led_automation"])
+
+    with cols[5]:
+        st.write("Dosing")
+        st.write(st.session_state["jobs"]["dosing_automation"])
+
+    st.divider()
+
     with st.form("experiment_form"):
         new_name = st.text_input("New Experiment Name")
         submit_new_experiment = st.form_submit_button("Create New Experiment")
@@ -389,30 +421,6 @@ if st.session_state["experiment"] is not None:
         time.sleep(3)
         st.rerun()
 
-    st.header("Running Jobs")
-        
-    cols = st.columns(5)
-
-    with cols[0]:
-        st.write("Temperature")
-        st.write(st.session_state["jobs"]["temperature_automation"])
-
-    with cols[1]:
-        st.write("Growth Rate")
-        st.write(st.session_state["jobs"]["growth_rate_calculating"])
-
-    with cols[2]:
-        st.write("Stirring")
-        st.write(st.session_state["jobs"]["stirring"])
-
-    with cols[3]:
-        st.write("OD Reading")
-        st.write(st.session_state["jobs"]["od_reading"])
-
-    with cols[4]:
-        st.write("LED")
-        st.write(st.session_state["jobs"]["led_automation"])
-
     st.divider()
 
     # Display the job details
@@ -773,7 +781,7 @@ if st.session_state["experiment"] is not None:
         st.session_state["client"].loop_start()
         st.session_state["client"].publish("pioreactor/control", payload_str, qos=1)
 
-        time.sleep(1)
+        time.sleep(2)
 
         # Check if the OD reading job is running
         get_running_jobs(st.session_state["client"], reactor)
@@ -1265,11 +1273,11 @@ if st.session_state["experiment"] is not None:
             "reactor": reactor,
             "filter_mod": 1,
             "lookback": 100000,
-            "filter_mod2": 188,
+            "filter_mod2": 1,
             "lookback2": 100000,
-            "filter_mod3": 188,
+            "filter_mod3": 1,
             "lookback3": 100000,
-            "filter_mod4": 188,
+            "filter_mod4": 1,
             "lookback4": 100000,
             "amount": amount_of_data,
             "amount2": amount_of_data2,