Update app_good.py

app_good.py

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+import gradio as gr
+import librosa
+import numpy as np
+import pandas as pd
+from sklearn.cluster import KMeans, AgglomerativeClustering, DBSCAN
+from sklearn.preprocessing import StandardScaler
+from sklearn.metrics.pairwise import cosine_similarity
+from scipy import signal
+from scipy.signal import get_window as scipy_get_window
+import plotly.express as px
+import plotly.graph_objects as go
+import os
+import tempfile
+
+# ----------------------------
+# 1. Signal Alignment & Preprocessing
+# ----------------------------
+def align_signals(ref, target):
+    """Aligns target signal to reference signal using Cross-Correlation."""
+    ref_norm = librosa.util.normalize(ref)
+    target_norm = librosa.util.normalize(target)
+    
+    correlation = signal.fftconvolve(target_norm, ref_norm[::-1], mode='full')
+    lags = signal.correlation_lags(len(target_norm), len(ref_norm), mode='full')
+    lag = lags[np.argmax(correlation)]
+    
+    if lag > 0:
+        aligned_target = target[lag:]
+        aligned_ref = ref
+    else:
+        aligned_target = target
+        aligned_ref = ref[abs(lag):]
+
+    min_len = min(len(aligned_ref), len(aligned_target))
+    return aligned_ref[:min_len], aligned_target[:min_len]
+
+# ----------------------------
+# 2. Segment Audio
+# ----------------------------
+def segment_audio(y, sr, frame_length_ms, hop_length_ms, window_type="hann"):
+    frame_length = int(frame_length_ms * sr / 1000)
+    hop_length = int(hop_length_ms * sr / 1000)
+    window = scipy_get_window(window_type if window_type != "rectangular" else "boxcar", frame_length)
+    frames = []
+    y_padded = np.pad(y, (0, frame_length), mode='constant')
+    
+    for i in range(0, len(y) - frame_length + 1, hop_length):
+        frame = y[i:i + frame_length] * window
+        frames.append(frame)
+        
+    if frames:
+        frames = np.array(frames).T
+    else:
+        frames = np.zeros((frame_length, 1))
+    return frames, frame_length
+
+# ----------------------------
+# 3. Feature Extraction
+# ----------------------------
+def extract_features_with_spectrum(frames, sr):
+    features = []
+    n_mfcc = 13
+    n_fft = min(2048, frames.shape[0])
+    
+    for i in range(frames.shape[1]):
+        frame = frames[:, i]
+        if len(frame) < n_fft or np.max(np.abs(frame)) < 1e-10:
+            feat = {k: 0.0 for k in ["rms", "spectral_centroid", "zcr", "spectral_flatness", 
+                                     "low_freq_energy", "mid_freq_energy", "high_freq_energy"]}
+            for j in range(n_mfcc): feat[f"mfcc_{j+1}"] = 0.0
+            feat["spectrum"] = np.zeros((n_fft // 2 + 1, 1))
+            features.append(feat)
+            continue
+
+        feat = {}
+        feat["rms"] = float(np.mean(librosa.feature.rms(y=frame)[0]))
+        feat["zcr"] = float(np.mean(librosa.feature.zero_crossing_rate(frame)[0]))
+        
+        try: feat["spectral_centroid"] = float(np.mean(librosa.feature.spectral_centroid(y=frame, sr=sr)[0]))
+        except: feat["spectral_centroid"] = 0.0
+            
+        try: feat["spectral_flatness"] = float(np.mean(librosa.feature.spectral_flatness(y=frame)[0]))
+        except: feat["spectral_flatness"] = 0.0
+
+        try:
+            mfccs = librosa.feature.mfcc(y=frame, sr=sr, n_mfcc=n_mfcc, n_fft=n_fft)
+            for j in range(n_mfcc): feat[f"mfcc_{j+1}"] = float(np.mean(mfccs[j]))
+        except:
+            for j in range(n_mfcc): feat[f"mfcc_{j+1}"] = 0.0
+
+        try:
+            S = np.abs(librosa.stft(frame, n_fft=n_fft))
+            S_db = librosa.amplitude_to_db(S, ref=np.max)
+            freqs = librosa.fft_frequencies(sr=sr, n_fft=n_fft)
+            low_mask = freqs <= 2000
+            mid_mask = (freqs > 2000) & (freqs <= 4000)
+            high_mask = freqs > 4000
+            feat["low_freq_energy"] = float(np.mean(S_db[low_mask])) if np.any(low_mask) else -80.0
+            feat["mid_freq_energy"] = float(np.mean(S_db[mid_mask])) if np.any(mid_mask) else -80.0
+            feat["high_freq_energy"] = float(np.mean(S_db[high_mask])) if np.any(high_mask) else -80.0
+            feat["spectrum"] = S_db
+        except:
+            feat["low_freq_energy"] = feat["mid_freq_energy"] = feat["high_freq_energy"] = -80.0
+            feat["spectrum"] = np.zeros((n_fft // 2 + 1, 1))
+            
+        features.append(feat)
+    return features
+
+# ----------------------------
+# 4. Frame Comparison
+# ----------------------------
+def compare_frames_enhanced(near_feats, far_feats, metrics):
+    min_len = min(len(near_feats), len(far_feats))
+    if min_len == 0: return pd.DataFrame({"frame_index": []})
+
+    results = {"frame_index": list(range(min_len))}
+    near_df = pd.DataFrame(near_feats[:min_len])
+    far_df = pd.DataFrame(far_feats[:min_len])
+    
+    drop_cols = ["spectrum"]
+    near_vec = near_df.drop(columns=drop_cols, errors="ignore").select_dtypes(include=[np.number]).values
+    far_vec = far_df.drop(columns=drop_cols, errors="ignore").select_dtypes(include=[np.number]).values
+
+    if "Euclidean Distance" in metrics:
+        results["euclidean_dist"] = np.linalg.norm(near_vec - far_vec, axis=1).tolist()
+
+    if "Cosine Similarity" in metrics:
+        cos_vals = []
+        for i in range(min_len):
+            a, b = near_vec[i].reshape(1, -1), far_vec[i].reshape(1, -1)
+            if np.all(a == 0) or np.all(b == 0): cos_vals.append(0.0)
+            else: cos_vals.append(float(cosine_similarity(a, b)[0][0]))
+        results["cosine_similarity"] = cos_vals
+
+    if "High-Freq Loss Ratio" in metrics:
+        loss_ratios = []
+        for i in range(min_len):
+            loss_ratios.append(float(near_feats[i]["high_freq_energy"] - far_feats[i]["high_freq_energy"]))
+        results["high_freq_loss_db"] = loss_ratios
+
+    overlap_scores = []
+    for i in range(min_len):
+        near_spec = near_feats[i]["spectrum"].flatten()
+        far_spec = far_feats[i]["spectrum"].flatten()
+        if np.all(near_spec == 0) or np.all(far_spec == 0): overlap_scores.append(0.0)
+        else: overlap_scores.append(float(cosine_similarity(near_spec.reshape(1, -1), far_spec.reshape(1, -1))[0][0]))
+    results["spectral_overlap"] = overlap_scores
+
+    combined = []
+    for i in range(min_len):
+        score = (results["spectral_overlap"][i] * 0.5) 
+        if "cosine_similarity" in results: score += (results["cosine_similarity"][i] * 0.5)
+        combined.append(score)
+    results["combined_match_score"] = combined
+    
+    return pd.DataFrame(results)
+
+# ----------------------------
+# 5. Dual Clustering Logic
+# ----------------------------
+def perform_dual_clustering(near_df, far_df, cluster_features, algo, n_clusters, eps):
+    """
+    Fits clustering on Near Field (clean), then predicts on Far Field (noisy).
+    This ensures Cluster 0 in Near corresponds to the same physical sound in Far.
+    """
+    if not cluster_features:
+        return near_df, far_df
+
+    valid_features = [f for f in cluster_features if f in near_df.columns]
+    if not valid_features:
+        return near_df, far_df
+
+    X_near = near_df[valid_features].values
+    X_near = np.nan_to_num(X_near)
+    
+    X_far = far_df[valid_features].values
+    X_far = np.nan_to_num(X_far)
+
+    # We use a Scaler to ensure features are comparable
+    scaler = StandardScaler()
+    X_near_scaled = scaler.fit_transform(X_near)
+    X_far_scaled = scaler.transform(X_far) # Use same scaler for Far
+
+    if algo == "KMeans":
+        model = KMeans(n_clusters=min(n_clusters, len(X_near)), random_state=42, n_init=10)
+        near_labels = model.fit_predict(X_near_scaled)
+        far_labels = model.predict(X_far_scaled) # Predict using Near model
+    elif algo == "Agglomerative":
+        # Agglomerative cannot "predict" on new data easily, so we cluster independently
+        # This is a limitation, but acceptable fallback
+        model = AgglomerativeClustering(n_clusters=min(n_clusters, len(X_near)))
+        near_labels = model.fit_predict(X_near_scaled)
+        far_model = AgglomerativeClustering(n_clusters=min(n_clusters, len(X_far)))
+        far_labels = far_model.fit_predict(X_far_scaled) 
+    elif algo == "DBSCAN":
+        # DBSCAN also cannot "predict", must fit_predict.
+        model = DBSCAN(eps=eps, min_samples=3)
+        near_labels = model.fit_predict(X_near_scaled)
+        far_labels = model.fit_predict(X_far_scaled)
+    else:
+        near_labels = np.zeros(len(X_near))
+        far_labels = np.zeros(len(X_far))
+        
+    near_df = near_df.copy()
+    near_df["cluster"] = near_labels
+    near_df["cluster"] = near_df["cluster"].astype(str) # For categorical coloring
+    
+    far_df = far_df.copy()
+    far_df["cluster"] = far_labels
+    far_df["cluster"] = far_df["cluster"].astype(str)
+
+    return near_df, far_df
+
+# ----------------------------
+# 6. Plotting Helpers
+# ----------------------------
+def generate_cluster_plot(df, x_attr, y_attr, title_suffix):
+    if len(df) == 0 or x_attr not in df.columns or y_attr not in df.columns:
+        return px.scatter(title="No Data")
+    
+    fig = px.scatter(
+        df, x=x_attr, y=y_attr, color="cluster",
+        title=f"Clustering Analysis ({title_suffix}): {x_attr} vs {y_attr}",
+        color_discrete_sequence=px.colors.qualitative.Bold # Consistent colors
+    )
+    return fig
+
+def update_cluster_view(view_mode, near_df, far_df, cluster_features):
+    if near_df is None or far_df is None:
+        return px.scatter(title="Run Analysis First")
+    
+    if len(cluster_features) < 2:
+         return px.scatter(title="Select at least 2 features")
+
+    x_attr, y_attr = cluster_features[0], cluster_features[1]
+    
+    if view_mode == "Near Field":
+        return generate_cluster_plot(near_df, x_attr, y_attr, "Near Field")
+    else:
+        return generate_cluster_plot(far_df, x_attr, y_attr, "Far Field")
+
+# ----------------------------
+# 7. Main Analysis
+# ----------------------------
+def analyze_audio_pair(
+    near_file, far_file,
+    frame_length_ms, hop_length_ms, window_type,
+    comparison_metrics, cluster_features, clustering_algo, n_clusters, dbscan_eps
+):
+    if not near_file or not far_file: raise gr.Error("Upload both files.")
+
+    # Load & Align
+    y_near, sr = librosa.load(near_file.name, sr=None)
+    y_far, _ = librosa.load(far_file.name, sr=sr)
+    
+    y_near = librosa.util.normalize(y_near)
+    y_far = librosa.util.normalize(y_far)
+    y_near, y_far = align_signals(y_near, y_far)
+    
+    # Process
+    frames_near, _ = segment_audio(y_near, sr, frame_length_ms, hop_length_ms, window_type)
+    frames_far, _ = segment_audio(y_far, sr, frame_length_ms, hop_length_ms, window_type)
+    
+    near_feats = extract_features_with_spectrum(frames_near, sr)
+    far_feats = extract_features_with_spectrum(frames_far, sr)
+    
+    # Comparison Data
+    comparison_df = compare_frames_enhanced(near_feats, far_feats, comparison_metrics)
+    
+    # Clustering Data
+    near_df_raw = pd.DataFrame(near_feats).drop(columns=["spectrum"], errors="ignore")
+    far_df_raw = pd.DataFrame(far_feats).drop(columns=["spectrum"], errors="ignore")
+    
+    # Perform Dual Clustering
+    near_clustered, far_clustered = perform_dual_clustering(
+        near_df_raw, far_df_raw, cluster_features, clustering_algo, n_clusters, dbscan_eps
+    )
+
+    # 1. Comparison Plot (Dual Axis)
+    plot_comparison = go.Figure()
+    # Axis 1: Similarity (0-1)
+    for col in ["cosine_similarity", "spectral_overlap", "combined_match_score"]:
+        if col in comparison_df.columns:
+            plot_comparison.add_trace(go.Scatter(x=comparison_df["frame_index"], y=comparison_df[col], name=col, yaxis="y1"))
+    # Axis 2: dB Loss
+    if "high_freq_loss_db" in comparison_df.columns:
+        plot_comparison.add_trace(go.Scatter(x=comparison_df["frame_index"], y=comparison_df["high_freq_loss_db"], 
+                                             name="High Freq Loss (dB)", line=dict(color="red", width=1), yaxis="y2"))
+    
+    plot_comparison.update_layout(
+        title="Comparison Metrics (Dual Axis)",
+        yaxis=dict(title="Similarity (0-1)", range=[0, 1.1]),
+        yaxis2=dict(title="Energy Diff (dB)", overlaying="y", side="right"),
+        legend=dict(x=1.1, y=1)
+    )
+
+    # 2. Initial Cluster Plot (Near Field)
+    init_cluster_plot = update_cluster_view("Near Field", near_clustered, far_clustered, cluster_features)
+
+    # 3. Spectral Heatmap
+    safe_idx = int(len(near_feats)/2)
+    diff = near_feats[safe_idx]["spectrum"] - far_feats[safe_idx]["spectrum"]
+    spec_heatmap = go.Figure(data=go.Heatmap(z=diff, colorscale='RdBu', zmid=0))
+    spec_heatmap.update_layout(title=f"Spectral Diff (Frame {safe_idx})", height=350)
+    
+    # 4. Overlay Plot (Simple)
+    near_clustered["match_quality"] = comparison_df["combined_match_score"]
+    if len(cluster_features) > 0:
+        overlay_fig = px.scatter(near_clustered, x=cluster_features[0], y="match_quality", color="cluster", 
+                                 title="Cluster vs Quality (Near Field)")
+    else:
+        overlay_fig = px.scatter(title="No features")
+
+    # Return: Plots + Dataframes for State + Raw Tables
+    return (plot_comparison, comparison_df, 
+            init_cluster_plot, near_clustered, # Table 
+            spec_heatmap, overlay_fig, 
+            near_clustered, far_clustered) # States
+
+def export_results(comparison_df, near_df, far_df):
+    temp_dir = tempfile.mkdtemp()
+    p1 = os.path.join(temp_dir, "comparison.csv")
+    p2 = os.path.join(temp_dir, "near_clusters.csv")
+    p3 = os.path.join(temp_dir, "far_clusters.csv")
+    comparison_df.to_csv(p1, index=False)
+    near_df.to_csv(p2, index=False)
+    far_df.to_csv(p3, index=False)
+    return [p1, p2, p3]
+
+# ----------------------------
+# 8. Gradio UI
+# ----------------------------
+feature_list = ["rms", "spectral_centroid", "zcr", "spectral_flatness", 
+                "low_freq_energy", "mid_freq_energy", "high_freq_energy"] + [f"mfcc_{i}" for i in range(1, 14)]
+
+with gr.Blocks(title="Audio Field Analyzer", theme=gr.themes.Soft()) as demo:
+    # State storage for interactivity
+    state_near_df = gr.State()
+    state_far_df = gr.State()
+
+    gr.Markdown("# 🎙️ Near vs Far Field Analyzer (Dual-Clustering)")
+    
+    with gr.Row():
+        near_file = gr.File(label="Near-Field (Ref)", file_types=[".wav"])
+        far_file = gr.File(label="Far-Field (Target)", file_types=[".wav"])
+
+    with gr.Accordion("⚙️ Settings", open=False):
+        frame_length_ms = gr.Slider(10, 200, value=30, label="Frame Length (ms)")
+        hop_length_ms = gr.Slider(5, 100, value=15, label="Hop Length (ms)")
+        window_type = gr.Dropdown(["hann", "hamming"], value="hann", label="Window")
+        
+        comparison_metrics = gr.CheckboxGroup(["Cosine Similarity", "High-Freq Loss Ratio"], 
+                                              value=["Cosine Similarity", "High-Freq Loss Ratio"], label="Metrics")
+        
+        cluster_features = gr.CheckboxGroup(feature_list, value=["spectral_centroid", "spectral_flatness"], 
+                                            label="Clustering Features")
+        
+        clustering_algo = gr.Dropdown(["KMeans", "Agglomerative"], value="KMeans", label="Algorithm")
+        n_clusters = gr.Slider(2, 10, value=4, step=1, label="Clusters")
+        dbscan_eps = gr.Slider(0.1, 5.0, value=0.5, visible=False)
+
+    btn = gr.Button("🚀 Analyze", variant="primary")
+
+    with gr.Tabs():
+        with gr.Tab("📈 Comparison"):
+            comp_plot = gr.Plot()
+            comp_table = gr.Dataframe()
+        
+        with gr.Tab("🧩 Phoneme Clustering"):
+            with gr.Row():
+                # TOGGLE SWITCH
+                view_toggle = gr.Radio(["Near Field", "Far Field"], value="Near Field", label="View Mode")
+            cluster_plot = gr.Plot()
+            cluster_table = gr.Dataframe()
+            
+        with gr.Tab("🔍 Spectral"):
+            spec_heatmap = gr.Plot()
+        with gr.Tab("🧭 Overlay"):
+            overlay_plot = gr.Plot()
+
+    with gr.Tab("📤 Export"):
+        export_btn = gr.Button("Download CSVs")
+        export_files = gr.Files()
+
+    # Main Analysis Event
+    btn.click(
+        fn=analyze_audio_pair,
+        inputs=[near_file, far_file, frame_length_ms, hop_length_ms, window_type,
+                comparison_metrics, cluster_features, clustering_algo, n_clusters, dbscan_eps],
+        outputs=[comp_plot, comp_table, 
+                 cluster_plot, cluster_table, 
+                 spec_heatmap, overlay_plot, 
+                 state_near_df, state_far_df] # Save to State
+    )
+
+    # Toggle Event (Updates plot without re-running analysis)
+    view_toggle.change(
+        fn=update_cluster_view,
+        inputs=[view_toggle, state_near_df, state_far_df, cluster_features],
+        outputs=[cluster_plot]
+    )
+
+    export_btn.click(fn=export_results, inputs=[comp_table, state_near_df, state_far_df], outputs=export_files)
+
+if __name__ == "__main__":
+    demo.launch()