Gradio app modifs
Browse files
app.py
CHANGED
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@@ -117,35 +117,43 @@ with gr.Blocks() as demo:
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# Chai1 Simulation Interface
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This interface allows you to run Chai1 simulations on a given Fasta sequence file.
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""")
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inp1 = gr.Textbox(placeholder="Fasta Sequence file", label="Input Fasta file")
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inp2 = gr.Textbox(placeholder="Config file", label="JSON Config file")
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btn = gr.Button("Run")
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out = Molecule3D(label="Molecule3D", reps=reps)
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btn.click(fn=compute_Chai1, inputs=[inp1 , inp2], outputs=[out])
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gr.
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# Launch both the Gradio web interface and the MCP server
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if __name__ == "__main__":
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# Chai1 Simulation Interface
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This interface allows you to run Chai1 simulations on a given Fasta sequence file.
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""")
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with gr.Tab("Configuration 📦"):
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text_input = gr.Textbox()
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text_output = gr.Textbox()
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text_button = gr.Button("Generate Configuration")
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text_button.click(fn=create_custom_config, inputs=[text_input], outputs=[text_output])
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gr.Markdown(
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"""
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You can input a Fasta file containing the sequence of the molecule you want to simulate.
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The output will be a 3D representation of the molecule based on the Chai1 model.
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## Instructions
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1. Upload a Fasta sequence file containing the molecule sequence.
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2. Click the "Run" button to start the simulation.
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3. The output will be a 3D visualization of the molecule.
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## Example Input
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You can use the default Fasta file provided in the inputs directory, or upload your own.
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## Output
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The output will be a 3D representation of the molecule, which you can interact with.
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## Note
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Make sure to have the necessary dependencies installed and the Chai1 model available in the specified directory.
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## Disclaimer
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This interface is for educational and research purposes only. The results may vary based on the input sequence and the Chai1 model's capabilities.
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## Contact
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For any issues or questions, please contact the developer or refer to the documentation.
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## Example Fasta File
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```
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>sp|P12345|EXAMPLE_HUMAN Example protein
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MSEQNNTEMTFQIQRIYTKDISFEAPNAPHVQKLLLQGQGQGQGQGQGQGQGQGQGQ
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""")
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with gr.Tab("Run folding simulation 🚀"):
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inp1 = gr.Textbox(placeholder="Fasta Sequence file", label="Input Fasta file")
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inp2 = gr.Textbox(placeholder="Config file", label="JSON Config file")
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btn = gr.Button("Run")
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out = Molecule3D(label="Molecule3D", reps=reps)
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btn.click(fn=compute_Chai1, inputs=[inp1 , inp2], outputs=[out])
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# Launch both the Gradio web interface and the MCP server
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if __name__ == "__main__":
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