.github/workflows/e2e-md-test.yml

# DISABLED: MD Simulation E2E Test workflow
# This workflow has been disabled to prevent the queued CI check from running
# Original workflow configuration is preserved below for reference
#
# name: MD Simulation E2E Test
# 
# on:
#   push:
#     branches: [main, develop, MD-integration]
#   pull_request:
#     branches: [main]
#   schedule:
#     - cron: "0 6 * * *"
#   workflow_dispatch:
# 
# concurrency:
#   group: e2e-md-${{ github.ref }}
#   cancel-in-progress: true
# 
# jobs:
#   e2e-md-simulation:
#     runs-on: ubuntu-latest
#     timeout-minutes: 30
# 
#     steps:
#       - name: Checkout code
#         uses: actions/checkout@v4
#         with:
#           lfs: true
# 
#       - name: Set up Docker Buildx
#         uses: docker/setup-buildx-action@v3
# 
#       - name: Build Laravel image
#         run: docker build -t ailixir-laravel .
# 
#       - name: Build MD simulation image
#         run: docker build -t md-simulation ai_apps/Protein-Ligand-MD-Simulation/
# 
#       - name: Create Docker network
#         run: docker network create ailixir-md
# 
#       - name: Start Redis
#         run: |
#           docker run -d --name md-redis \
#             --network ailixir-md \
#             --network-alias md-redis \
#             redis:7-alpine
# 
#       - name: Start MD Simulation API
#         run: |
#           docker run -d --name md-api \
#             --network ailixir-md \
#             -p 5005:5005 \
#             -e REDIS_HOST=md-redis \
#             -e REDIS_PORT=6379 \
#             -e USE_REDIS=true \
#             -e OPENMM_PLATFORM=CPU \
#             -e FLASK_HOST=0.0.0.0 \
#             -e FLASK_PORT=5005 \
#             -e MD_DATA_DIR=/app/data \
#             -e LOG_LEVEL=INFO \
#             md-simulation
# 
#       - name: Start Laravel API
#         run: |
#           docker run -d --name ailixir-laravel \
#             --network ailixir-md \
#             -p 8000:7860 \
#             --env-file docker/laravel.env \
#             -e MD_SIMULATION_URL=http://md-api:5005 \
#             -e QUEUE_CONNECTION=sync \
#             -e APP_KEY=base64:l+P8vPcH6w+2qV6vYC3h8K9xN0mR4sT5uW6xY7zA8bB= \
#             ailixir-laravel
# 
#       - name: Wait for Laravel API to be ready
#         run: |
#           echo "Waiting for Laravel API to be ready..."
#           for i in $(seq 1 30); do
#             if curl -sf http://localhost:8000/ > /dev/null 2>&1; then
#               echo "Laravel API is ready"
#               exit 0
#             fi
#             echo "Waiting for Laravel ($i/30)..."
#             sleep 2
#           done
#           docker logs ailixir-laravel
#           exit 1
# 
#       - name: Wait for MD Simulation API to be healthy
#         run: |
#           echo "Waiting for MD Simulation API to be healthy..."
#           for i in $(seq 1 60); do
#             if curl -sf http://localhost:5005/health > /dev/null 2>&1; then
#               echo "MD Simulation API is healthy"
#               exit 0
#             fi
#             echo "Waiting for MD API ($i/60)..."
#             sleep 5
#           done
#           docker logs md-api
#           exit 1
# 
#       - name: Run MD Simulation E2E tests
#         run: |
#           docker exec \
#             -e MD_E2E_BASE_URL=http://localhost:8000/api \
#             ailixir-laravel \
#             ./vendor/bin/pest --filter=MdSimulationE2ETest --log-junit=/var/www/html/junit.xml
# 
#       - name: Copy test results from container
#         if: always()
#         run: |
#           docker cp ailixir-laravel:/var/www/html/junit.xml ./junit.xml || true
# 
#       - name: Upload test results
#         uses: actions/upload-artifact@v4
#         if: always()
#         with:
#           name: e2e-md-test-results
#           path: junit.xml
# 
#       - name: Test Summary
#         uses: test-summary/action@v2
#         if: always()
#         with:
#           paths: junit.xml
# 
#       - name: Dump logs on failure
#         if: failure()
#         run: |
#           echo "=== Laravel logs ==="
#           docker logs ailixir-laravel || true
#           echo "=== MD API logs ==="
#           docker logs md-api || true
#           echo "=== Redis logs ==="
#           docker logs md-redis || true
# 
#       - name: Cleanup
#         if: always()
#         run: |
#           docker rm -f ailixir-laravel md-api md-redis 2>/dev/null || true
#           docker network rm ailixir-md 2>/dev/null || true