.github/workflows/integration-test-hf.yml

name: HF Spaces Integration Test

on:
  push:
    branches: [main, develop, "feature/**"]
  pull_request:
    branches: [main, develop]
  workflow_dispatch:

concurrency:
  group: hf-integration-${{ github.ref }}
  cancel-in-progress: true

jobs:
  core-ai-proxy:
    runs-on: ubuntu-latest
    timeout-minutes: 30

    steps:
      - name: Checkout
        uses: actions/checkout@v4

      - name: Warm up ailixir-api Space
        run: |
          echo "Waiting for ailixir-api HF Space..."
          for i in $(seq 1 60); do
            if curl -sf https://Ailixir-AI-Team-ailixir-api.hf.space/ > /dev/null 2>&1; then
              echo "ailixir-api is up"
              sleep 5
              exit 0
            fi
            echo "Attempt $i/60..."
            sleep 5
          done
          exit 1

      - name: Warm up ailixir-drug-repurposing Space
        run: |
          echo "Waiting for ailixir-drug-repurposing HF Space..."
          for i in $(seq 1 60); do
            if curl -sf https://RottenShadow-ailixir-drug-repurposing.hf.space/health > /dev/null 2>&1; then
              echo "ailixir-drug-repurposing is up"
              sleep 3
              exit 0
            fi
            echo "Attempt $i/60..."
            sleep 5
          done
          exit 1

      - name: Warm up ailixir-admet Space
        run: |
          echo "Waiting for ailixir-admet HF Space..."
          for i in $(seq 1 60); do
            if curl -sf https://shdwRow-ailixir-admet.hf.space/health > /dev/null 2>&1; then
              echo "ailixir-admet is up"
              sleep 3
              exit 0
            fi
            echo "Attempt $i/60..."
            sleep 5
          done
          exit 1

      - name: Warm up ailixir-chemical-rag Space
        run: |
          echo "Waiting for ailixir-chemical-rag HF Space..."
          for i in $(seq 1 60); do
            if curl -sf https://RottenShadow-ailixir-chemical-rag.hf.space/health > /dev/null 2>&1; then
              echo "ailixir-chemical-rag is up"
              sleep 3
              exit 0
            fi
            echo "Attempt $i/60..."
            sleep 5
          done
          exit 1

      - name: Login and get Bearer token
        run: |
          echo "POST /api/user/login"
          HTTP_CODE=$(curl -s -o login.json -w "%{http_code}" -X POST https://Ailixir-AI-Team-ailixir-api.hf.space/api/user/login \
            -H "Content-Type: application/json" \
            -d '{"email":"salehyasmeen080@gmail.com","password":"123456789"}')
          echo "HTTP Status: $HTTP_CODE"
          cat login.json
          echo ""

          if [ "$HTTP_CODE" != "200" ]; then
            echo "Login failed with HTTP $HTTP_CODE"
            exit 1
          fi

          python3 - <<'PY'
          import json, sys
          try:
              data = json.load(open("login.json"))
          except json.JSONDecodeError as e:
              print("Invalid JSON response:", e)
              with open("login.json") as f:
                  print("Raw response:", f.read())
              sys.exit(1)

          if not data.get("success"):
              print("Login failed:", json.dumps(data, indent=2))
              sys.exit(1)

          token = data.get("data", {}).get("token")
          if not token:
              print("No token in response:", json.dumps(data, indent=2))
              sys.exit(1)

          with open("token.txt", "w") as f:
              f.write(token)
          print("Login OK - token saved")
          PY

      - name: Test aggregated AI health via Laravel
        run: |
          TOKEN=$(cat token.txt)
          echo "GET /api/ai-services/health"
          HTTP_CODE=$(curl -s -o health.json -w "%{http_code}" https://Ailixir-AI-Team-ailixir-api.hf.space/api/ai-services/health \
            -H "Authorization: Bearer $TOKEN")
          echo "HTTP Status: $HTTP_CODE"
          cat health.json
          echo ""
          python3 - <<'PY'
          import json, sys
          data = json.load(open("health.json"))
          if not data.get("success"):
              print("AI services health check failed:", json.dumps(data, indent=2))
              sys.exit(1)
          print("All AI services healthy via Laravel proxy")
          PY

      - name: Test ADMET prediction via Laravel proxy
        run: |
          TOKEN=$(cat token.txt)
          echo "POST /api/admet/predict"
          HTTP_CODE=$(curl -s -o admet.json -w "%{http_code}" -X POST https://Ailixir-AI-Team-ailixir-api.hf.space/api/admet/predict \
            -H "Authorization: Bearer $TOKEN" \
            -H "Content-Type: application/json" \
            -d '{"smiles": "c1ccccc1, CCO, CCC"}')
          echo "HTTP Status: $HTTP_CODE"
          cat admet.json
          echo ""

          if [ "$HTTP_CODE" != "200" ]; then
            echo "ADMET prediction failed with HTTP $HTTP_CODE"
            exit 1
          fi

          python3 - <<'PY'
          import json, sys
          try:
              data = json.load(open("admet.json"))
          except json.JSONDecodeError as e:
              print("Invalid JSON response:", e)
              with open("admet.json") as f:
                  print("Raw response:", f.read())
              sys.exit(1)

          if not data.get("success"):
              print("ADMET prediction test failed:", json.dumps(data, indent=2))
              sys.exit(1)

          results = data.get("data", {}).get("results", [])
          if len(results) < 3:
              print(f"Expected at least 3 results, got {len(results)}")
              sys.exit(1)

          print(f"ADMET prediction OK - {len(results)} compounds processed")
          PY

      - name: Test Chemical RAG proxy via Laravel
        run: |
          TOKEN=$(cat token.txt)
          echo "POST /api/ai-services/test/chemical-search"
          HTTP_CODE=$(curl -s -o chemical.json -w "%{http_code}" -X POST https://Ailixir-AI-Team-ailixir-api.hf.space/api/ai-services/test/chemical-search \
            -H "Authorization: Bearer $TOKEN" \
            -H "Content-Type: application/json" \
            -d '{"query": "malaria drug"}')
          echo "HTTP Status: $HTTP_CODE"
          cat chemical.json
          echo ""
          python3 - <<'PY'
          import json, sys
          data = json.load(open("chemical.json"))
          if not data.get("success"):
              print("Chemical RAG proxy test failed:", json.dumps(data, indent=2))
              sys.exit(1)
          print("Chemical RAG proxy OK")
          PY

      - name: Test Drug Repurposing proxy via Laravel
        run: |
          TOKEN=$(cat token.txt)
          echo "GET /api/ai-services/test/drug-repurposing"
          HTTP_CODE=$(curl -s -o drug.json -w "%{http_code}" https://Ailixir-AI-Team-ailixir-api.hf.space/api/ai-services/test/drug-repurposing \
            -H "Authorization: Bearer $TOKEN")
          echo "HTTP Status: $HTTP_CODE"
          cat drug.json
          echo ""
          python3 - <<'PY'
          import json, sys
          data = json.load(open("drug.json"))
          if not data.get("success"):
              print("Drug Repurposing proxy test failed:", json.dumps(data, indent=2))
              sys.exit(1)
          print("Drug Repurposing proxy OK")
          PY

  chemical-search:
    runs-on: ubuntu-latest
    timeout-minutes: 15

    steps:
      - name: Checkout
        uses: actions/checkout@v4

      - name: Warm up ailixir-api Space
        run: |
          for i in $(seq 1 60); do
            if curl -sf https://Ailixir-AI-Team-ailixir-api.hf.space/ > /dev/null 2>&1; then
              echo "ailixir-api is up"
              sleep 5
              exit 0
            fi
            echo "Waiting ($i/60)..."
            sleep 5
          done
          exit 1

      - name: Login and get Bearer token
        run: |
          HTTP_CODE=$(curl -s -o login.json -w "%{http_code}" -X POST https://Ailixir-AI-Team-ailixir-api.hf.space/api/user/login \
            -H "Content-Type: application/json" \
            -d '{"email":"salehyasmeen080@gmail.com","password":"123456789"}')
          if [ "$HTTP_CODE" != "200" ]; then exit 1; fi
          python3 - <<'PY'
          import json
          with open('login.json') as f: data = json.load(f)
          token = data.get('data', {}).get('token')
          if not token: exit(1)
          with open('token.txt','w') as f: f.write(token)
          print('Login OK')
          PY

      - name: Test retrieval-only chemical search
        run: |
          TOKEN=$(cat token.txt)
          echo "POST /api/chemical-search (retrieval-only)"
          HTTP_CODE=$(curl -s -o search.json -w "%{http_code}" -X POST https://Ailixir-AI-Team-ailixir-api.hf.space/api/chemical-search \
            -H "Authorization: Bearer $TOKEN" \
            -H "Content-Type: application/json" \
            -d '{"smiles":"CC(=O)O"}')
          echo "HTTP Status: $HTTP_CODE"
          cat search.json
          echo ""
          python3 - <<'PY'
          import json, sys
          data = json.load(open("search.json"))
          if not data.get("success"):
              print("Chemical search (retrieval-only) failed:", json.dumps(data, indent=2))
              sys.exit(1)
          if not isinstance(data.get("compounds"), list):
              print("Missing 'compounds' array in response")
              sys.exit(1)
          if data.get("metadata", {}).get("source") != "retrieval":
              print("Expected source='retrieval', got:", data.get("metadata", {}).get("source"))
              sys.exit(1)
          print("Chemical search (retrieval-only) OK - found", len(data["compounds"]), "compounds")
          PY

      - name: Test full RAG chemical search
        run: |
          TOKEN=$(cat token.txt)
          echo "POST /api/chemical-search/full-rag"
          HTTP_CODE=$(curl -s -o rag.json -w "%{http_code}" -X POST https://Ailixir-AI-Team-ailixir-api.hf.space/api/chemical-search/full-rag \
            -H "Authorization: Bearer $TOKEN" \
            -H "Content-Type: application/json" \
            -d '{"smiles":"CC(=O)O"}')
          echo "HTTP Status: $HTTP_CODE"
          cat rag.json
          echo ""
          python3 - <<'PY'
          import json, sys
          data = json.load(open("rag.json"))
          if not data.get("success"):
              print("Chemical search (full RAG) failed:", json.dumps(data, indent=2))
              sys.exit(1)
          if not isinstance(data.get("compounds"), list):
              print("Missing 'compounds' array in response")
              sys.exit(1)
          if data.get("metadata", {}).get("source") != "full_rag":
              print("Expected source='full_rag', got:", data.get("metadata", {}).get("source"))
              sys.exit(1)
          for compound in data["compounds"]:
              if not compound.get("explanation"):
                  print("Missing explanation for compound:", compound.get("name"))
                  sys.exit(1)
          print("Chemical search (full RAG) OK - found", len(data["compounds"]), "compounds with explanations")
          PY

  drug-repurposing-integration:
    runs-on: ubuntu-latest
    timeout-minutes: 30

    steps:
      - name: Checkout
        uses: actions/checkout@v4

      - name: Warm up ailixir-api Space
        run: |
          for i in $(seq 1 60); do
            if curl -sf https://Ailixir-AI-Team-ailixir-api.hf.space/ > /dev/null 2>&1; then
              echo "ailixir-api is up"
              sleep 5
              exit 0
            fi
            echo "Waiting ($i/60)..."
            sleep 5
          done
          exit 1

      - name: Login and get Bearer token
        run: |
          HTTP_CODE=$(curl -s -o login.json -w "%{http_code}" -X POST https://Ailixir-AI-Team-ailixir-api.hf.space/api/user/login \
            -H "Content-Type: application/json" \
            -d '{"email":"salehyasmeen080@gmail.com","password":"123456789"}')
          if [ "$HTTP_CODE" != "200" ]; then exit 1; fi
          python3 - <<'PY'
          import json
          with open('login.json') as f: data = json.load(f)
          token = data.get('data', {}).get('token')
          if not token: exit(1)
          with open('token.txt','w') as f: f.write(token)
          print('Login OK')
          PY

      - name: Test unauthenticated DR request is rejected
        run: |
          echo "POST /api/drug-repurposing/targets (no auth)"
          HTTP_CODE=$(curl -s -o dr_unauth.json -w "%{http_code}" -X POST https://Ailixir-AI-Team-ailixir-api.hf.space/api/drug-repurposing/targets \
            -H "Content-Type: application/json" \
            -d '{"disease_name":"Type 2 Diabetes"}')
          if [ "$HTTP_CODE" != "401" ]; then
            echo "Expected 401, got $HTTP_CODE"
            exit 1
          fi
          python3 - <<'PY'
          import json
          with open('dr_unauth.json') as f: data = json.load(f)
          assert not data.get('success', True), 'Expected success=false'
          print('Unauthenticated DR request correctly rejected')
          PY

      - name: Test DR target lookup requires disease_name
        run: |
          TOKEN=$(cat token.txt)
          echo "POST /api/drug-repurposing/targets (missing disease_name)"
          HTTP_CODE=$(curl -s -o dr_validation.json -w "%{http_code}" -X POST https://Ailixir-AI-Team-ailixir-api.hf.space/api/drug-repurposing/targets \
            -H "Authorization: Bearer $TOKEN" \
            -H "Content-Type: application/json" \
            -d '{"top_n": 2}')
          if [ "$HTTP_CODE" != "422" ]; then
            echo "Expected 422, got $HTTP_CODE"
            exit 1
          fi
          echo "Missing disease_name correctly rejected"

      - name: Test DR target lookup via Laravel proxy
        run: |
          TOKEN=$(cat token.txt)
          echo "POST /api/drug-repurposing/targets"
          HTTP_CODE=$(curl -s -o dr_targets.json -w "%{http_code}" -X POST https://Ailixir-AI-Team-ailixir-api.hf.space/api/drug-repurposing/targets \
            -H "Authorization: Bearer $TOKEN" \
            -H "Content-Type: application/json" \
            -d '{"disease_name":"Type 2 Diabetes","top_n":2}')
          echo "HTTP Status: $HTTP_CODE"
          cat dr_targets.json
          echo ""

          if [ "$HTTP_CODE" != "200" ]; then
            echo "DR target lookup failed with HTTP $HTTP_CODE"
            exit 1
          fi

          python3 - <<'PY'
          import json, sys, time, urllib.request

          data = json.load(open("dr_targets.json"))
          if not data.get("success"):
              print("DR target lookup failed:", json.dumps(data, indent=2))
              sys.exit(1)

          job_id = data.get("data", {}).get("job_id")
          status = data.get("data", {}).get("status")
          print(f"DR target lookup OK - job_id={job_id}, status={status}")

          # Poll for completion with exponential backoff
          base = "https://Ailixir-AI-Team-ailixir-api.hf.space/api/drug-repurposing/targets"
          with open("token.txt") as f: token = f.read().strip()

          max_attempts = 30
          backoff_base = 5  # Start with 5 second delay
          retry_count = 0
          max_retries = 3

          for i in range(max_attempts):
              try:
                  req = urllib.request.Request(f"{base}/{job_id}")
                  req.add_header("Authorization", f"Bearer {token}")
                  resp = urllib.request.urlopen(req)
                  status_data = json.loads(resp.read())
                  retry_count = 0  # Reset retry count on success

                  s = status_data.get("data", {}).get("status")
                  if s == "completed":
                      output = status_data.get("data", {}).get("output", {})
                      assert len(output.get("targets", [])) > 0, "No targets found"
                      print(f"DR targets completed - {len(output['targets'])} targets found")
                      sys.exit(0)
                  elif s == "failed":
                      print("DR target lookup failed:", json.dumps(status_data, indent=2))
                      sys.exit(1)

                  print(f"  Polling... attempt {i+1}/{max_attempts}, status={s}")
                  time.sleep(backoff_base)

              except urllib.error.HTTPError as e:
                  if e.code == 429 and retry_count < max_retries:
                      # Rate limited - exponential backoff
                      retry_count += 1
                      wait_time = backoff_base * (2 ** retry_count)
                      print(f"  Rate limited (429). Retry {retry_count}/{max_retries}, waiting {wait_time}s...")
                      time.sleep(wait_time)
                  else:
                      print(f"HTTP Error {e.code}: {e.reason}")
                      sys.exit(1)

          print("DR target lookup did not complete in time")
          sys.exit(1)
          PY

  docking-integration:
    runs-on: ubuntu-latest
    timeout-minutes: 15

    steps:
      - name: Checkout
        uses: actions/checkout@v4

      - name: Warm up ailixir-api Space
        run: |
          for i in $(seq 1 60); do
            if curl -sf https://Ailixir-AI-Team-ailixir-api.hf.space/ > /dev/null 2>&1; then
              echo "ailixir-api is up"
              sleep 5
              exit 0
            fi
            echo "Waiting ($i/60)..."
            sleep 5
          done
          exit 1

      - name: Login and get Bearer token
        run: |
          HTTP_CODE=$(curl -s -o login.json -w "%{http_code}" -X POST https://Ailixir-AI-Team-ailixir-api.hf.space/api/user/login \
            -H "Content-Type: application/json" \
            -d '{"email":"salehyasmeen080@gmail.com","password":"123456789"}')
          if [ "$HTTP_CODE" != "200" ]; then exit 1; fi
          python3 - <<'PY'
          import json
          with open('login.json') as f: data = json.load(f)
          token = data.get('data', {}).get('token')
          if not token: exit(1)
          with open('token.txt','w') as f: f.write(token)
          print('Login OK')
          PY

      - name: Test docking submit
        run: |
          TOKEN=$(cat token.txt)
          echo "POST /api/docking/submit"
          HTTP_CODE=$(curl -s -o docking.json -w "%{http_code}" -X POST https://Ailixir-AI-Team-ailixir-api.hf.space/api/docking/submit \
            -H "Authorization: Bearer $TOKEN" \
            -F "protein_name=EGFR" \
            -F "protein_file=@tests/Fixtures/docking/egfr_clean.pdbqt" \
            -F "ligand_name=Erlotinib" \
            -F "ligand_file=@tests/Fixtures/docking/ligand.pdbqt" \
            -F "center_x=10.0" \
            -F "center_y=15.0" \
            -F "center_z=20.0" \
            -F "box_size_x=25.0" \
            -F "box_size_y=25.0" \
            -F "box_size_z=25.0" \
            -F "exhaustiveness=8")
          echo "HTTP Status: $HTTP_CODE"
          cat docking.json
          echo ""

          if [ "$HTTP_CODE" != "200" ]; then
            echo "Docking submit failed with HTTP $HTTP_CODE"
            exit 1
          fi

          python3 - <<'PY'
          import json, sys
          data = json.load(open("docking.json"))
          if not data.get("success"):
              print("Docking submit failed:", json.dumps(data, indent=2))
              sys.exit(1)
          print("Docking submit OK - job created")
          PY