Spaces:
Runtime error
Runtime error
Create app.py
Browse files
app.py
ADDED
|
@@ -0,0 +1,122 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
import os
|
| 2 |
+
import torch
|
| 3 |
+
import re
|
| 4 |
+
import gradio as gr
|
| 5 |
+
from transformers import AutoModelForCausalLM, AutoTokenizer, BitsAndBytesConfig, TextIteratorStreamer
|
| 6 |
+
from peft import PeftModel
|
| 7 |
+
from threading import Thread
|
| 8 |
+
|
| 9 |
+
# ==========================================
|
| 10 |
+
# 1. SETUP & AUTHENTICATION
|
| 11 |
+
# ==========================================
|
| 12 |
+
# Mistral requires an HF token to download the base model.
|
| 13 |
+
# You must add your token in the HF Spaces "Settings" -> "Variables and secrets" as 'HF_TOKEN'
|
| 14 |
+
hf_token = os.environ.get("HF_TOKEN")
|
| 15 |
+
|
| 16 |
+
BASE_MODEL = "mistralai/Mistral-7B-Instruct-v0.2"
|
| 17 |
+
ADAPTER_REPO = "your-username/Medical-Mistral-7B-LoRA" # <--- CHANGE THIS TO YOUR REPO
|
| 18 |
+
|
| 19 |
+
print("Booting up Clinical AI Server...")
|
| 20 |
+
|
| 21 |
+
tokenizer = AutoTokenizer.from_pretrained(BASE_MODEL, token=hf_token)
|
| 22 |
+
tokenizer.pad_token = tokenizer.eos_token
|
| 23 |
+
|
| 24 |
+
# Load Base Model in 4-bit precision
|
| 25 |
+
bnb_config = BitsAndBytesConfig(
|
| 26 |
+
load_in_4bit=True,
|
| 27 |
+
bnb_4bit_quant_type="nf4",
|
| 28 |
+
bnb_4bit_compute_dtype=torch.float16
|
| 29 |
+
)
|
| 30 |
+
|
| 31 |
+
base_model = AutoModelForCausalLM.from_pretrained(
|
| 32 |
+
BASE_MODEL,
|
| 33 |
+
quantization_config=bnb_config,
|
| 34 |
+
device_map="auto",
|
| 35 |
+
token=hf_token
|
| 36 |
+
)
|
| 37 |
+
|
| 38 |
+
# Merge Base Model with your Trained LoRA Adapter
|
| 39 |
+
print("Downloading and attaching LoRA Adapter from Hub...")
|
| 40 |
+
model = PeftModel.from_pretrained(base_model, ADAPTER_REPO, token=hf_token)
|
| 41 |
+
model.eval()
|
| 42 |
+
print("✅ Model Ready!")
|
| 43 |
+
|
| 44 |
+
# ==========================================
|
| 45 |
+
# 2. FORMATTING FUNCTION
|
| 46 |
+
# ==========================================
|
| 47 |
+
def format_and_clean(text):
|
| 48 |
+
end_triggers = ["regards", "hope this", "hope i", "let me know", "dr.", "thanks for"]
|
| 49 |
+
lower_text = text.lower()
|
| 50 |
+
cutoff = len(text)
|
| 51 |
+
|
| 52 |
+
for trigger in end_triggers:
|
| 53 |
+
idx = lower_text.find(trigger)
|
| 54 |
+
if idx != -1 and idx < cutoff:
|
| 55 |
+
cutoff = idx
|
| 56 |
+
|
| 57 |
+
clean = text[:cutoff].strip().replace('*', '')
|
| 58 |
+
|
| 59 |
+
sentences = clean.split(". ")
|
| 60 |
+
capitalized = [s.capitalize() for s in sentences if s]
|
| 61 |
+
clean = ". ".join(capitalized)
|
| 62 |
+
|
| 63 |
+
clean = re.sub(r'(?i)assessment\s*:', '**Assessment:** ', clean)
|
| 64 |
+
clean = re.sub(r'(?i)analysis\s*:', '\n\n**Analysis:** ', clean)
|
| 65 |
+
clean = re.sub(r'(?i)recommended action\s*:', '\n\n**Recommended Action:** ', clean)
|
| 66 |
+
|
| 67 |
+
return clean
|
| 68 |
+
|
| 69 |
+
# ==========================================
|
| 70 |
+
# 3. CHAT ENGINE & UI
|
| 71 |
+
# ==========================================
|
| 72 |
+
def clinical_chat(message, history):
|
| 73 |
+
prompt = f"""<s>[INST] You are a highly intelligent clinical AI. The user says: "{message}"
|
| 74 |
+
|
| 75 |
+
If the user provides symptoms, diagnose them. If the user asks about a known condition, provide treatment advice.
|
| 76 |
+
|
| 77 |
+
You MUST format your response exactly like this:
|
| 78 |
+
**Assessment:** [Name of the condition]
|
| 79 |
+
**Analysis:** [Brief explanation]
|
| 80 |
+
**Recommended Action:** [Medical advice]
|
| 81 |
+
|
| 82 |
+
Do not include greetings, sign-offs, or links. [/INST]"""
|
| 83 |
+
|
| 84 |
+
inputs = tokenizer(prompt, return_tensors="pt").to("cuda")
|
| 85 |
+
streamer = TextIteratorStreamer(tokenizer, skip_prompt=True, skip_special_tokens=True, timeout=10.0)
|
| 86 |
+
|
| 87 |
+
generation_kwargs = dict(
|
| 88 |
+
**inputs,
|
| 89 |
+
streamer=streamer,
|
| 90 |
+
max_new_tokens=300,
|
| 91 |
+
temperature=0.2,
|
| 92 |
+
repetition_penalty=1.15,
|
| 93 |
+
do_sample=True,
|
| 94 |
+
pad_token_id=tokenizer.eos_token_id
|
| 95 |
+
)
|
| 96 |
+
|
| 97 |
+
thread = Thread(target=model.generate, kwargs=generation_kwargs)
|
| 98 |
+
thread.start()
|
| 99 |
+
|
| 100 |
+
partial_text = ""
|
| 101 |
+
for new_token in streamer:
|
| 102 |
+
partial_text += new_token
|
| 103 |
+
yield format_and_clean(partial_text)
|
| 104 |
+
|
| 105 |
+
# Launch UI inside Docker container
|
| 106 |
+
theme = gr.themes.Soft(primary_hue="blue", neutral_hue="slate")
|
| 107 |
+
|
| 108 |
+
demo = gr.ChatInterface(
|
| 109 |
+
fn=clinical_chat,
|
| 110 |
+
title="⚕️ Clinical AI Diagnostic Assistant",
|
| 111 |
+
description="**Enter your symptoms or medical queries below for a professional analysis.**",
|
| 112 |
+
theme=theme,
|
| 113 |
+
examples=[
|
| 114 |
+
"I am having severe headache, body pain and strain in my neck.",
|
| 115 |
+
"What medicine should I take if I have high cholesterol?",
|
| 116 |
+
"I have been sneezing and coughing for 3 days."
|
| 117 |
+
]
|
| 118 |
+
)
|
| 119 |
+
|
| 120 |
+
if __name__ == "__main__":
|
| 121 |
+
# 0.0.0.0 and port 7860 are strictly required for Docker on Hugging Face Spaces
|
| 122 |
+
demo.launch(server_name="0.0.0.0", server_port=7860)
|