Rename pages/d101110xflex.py to pages/ctrl_suture.py

pages/{d101110xflex.py → ctrl_suture.py}

@@ -13,7 +13,7 @@ pl.enable_string_cache(False)
 
 dash.register_page(__name__, location="sidebar")
 
-dataset = "data10xflex/d1011/10xflexd1011_umap_clusres"
+dataset = "datasuture/ctrl/sc_liu_suture_ctrl"
 
 # Set custom resolution for plots:
 config_fig = {
@@ -161,58 +161,110 @@ tab1_content = html.Div([
 tab2_content = html.Div([
     html.Div([
             html.Label("S-cycle genes"),
-            dcc.Dropdown(id='dpdn3', value="MCM5", multi=False,
+            dcc.Dropdown(id='dpdn3', value="Mcm5", multi=False,
                  options=[
-    "MCM5",
-    "PCNA",
-    "TYMS",
-    "FEN1",
-    "MCM2",
-    "MCM4",
-    "RRM1",
-    "UNG",
-    "GINS2",
-    "MCM6",
-    "CDCA7",
-    "DTL",
-    "PRIM1",
-    "UHRF1",
-    "MLF1IP",
-    "HELLS",
-    "RFC2",
-    "RPA2",
-    "NASP",
-    "RAD51AP1",
-    "GMNN",
-    "WDR76",
-    "SLBP",
-    "CCNE2",
-    "UBR7",
-    "POLD3",
-    "MSH2",
-    "ATAD2",
-    "RAD51",
-    "RRM2",
-    "CDC45",
-    "CDC6",
-    "EXO1",
-    "TIPIN",
-    "DSCC1",
-    "BLM",
-    "CASP8AP2",
-    "USP1",
-    "CLSPN",
-    "POLA1",
-    "CHAF1B",
-    "BRIP1",
-    "E2F8"
+    "Cdc45",
+    "Uhrf1",
+    "Mcm2",
+    "Slbp",
+    "Mcm5",
+    "Pola1",
+    "Gmnn",
+    "Cdc6",
+    "Rrm2",
+    "Atad2",
+    "Dscc1",
+    "Mcm4",
+    "Chaf1b",
+    "Rfc2",
+    "Msh2",
+    "Fen1",
+    "Hells",
+    "Prim1",
+    "Tyms",
+    "Mcm6",
+    "Wdr76",
+    "Rad51",
+    "Pcna",
+    "Ccne2",
+    "Casp8ap2",
+    "Usp1",
+    "Nasp",
+    "Rpa2",
+    "Ung",
+    "Rad51ap1",
+    "Blm",
+    "Pold3",
+    "Rrm1",
+    "Cenpu",
+    "Gins2",
+    "Tipin",
+    "Brip1",
+    "Dtl",
+    "Exo1",
+    "Ubr7",
+    "Clspn",
+    "E2f8",
+    "Cdca7"
 ]),
             html.Label("G2M-cycle genes"),
-            dcc.Dropdown(id='dpdn4', value="TOP2A", multi=False,
+            dcc.Dropdown(id='dpdn4', value="Top2a", multi=False,
                  options=[
-    'HMGB2', 'CDK1', 'NUSAP1', 'UBE2C', 'BIRC5', 'TPX2', 'TOP2A', 'NDC80', 'CKS2', 'NUF2', 'CKS1B', 'MKI67', 'TMPO', 'CENPF', 'TACC3', 'FAM64A', 'SMC4', 'CCNB2', 'CKAP2L', 'CKAP2', 'AURKB', 'BUB1', 'KIF11', 'ANP32E', 'TUBB4B', 'GTSE1', 'KIF20B', 'HJURP', 'CDCA3', 'HN1', 'CDC20', 'TTK', 'CDC25C', 'KIF2C', 'RANGAP1', 'NCAPD2', 'DLGAP5', 'CDCA2', 'CDCA8', 'ECT2', 'KIF23', 'HMMR', 'AURKA', 'PSRC1', 'ANLN', 'LBR', 'CKAP5', 
-                     'CENPE', 'CTCF', 'NEK2', 'G2E3', 'GAS2L3', 'CBX5', 'CENPA'
+    "Ube2c",
+    "Lbr",
+    "Ctcf",
+    "Cdc20",
+    "Cbx5",
+    "Kif11",
+    "Anp32e",
+    "Birc5",
+    "Cdk1",
+    "Tmpo",
+    "Hmmr",
+    "Pimreg",
+    "Aurkb",
+    "Top2a",
+    "Gtse1",
+    "Rangap1",
+    "Cdca3",
+    "Ndc80",
+    "Kif20b",
+    "Cenpf",
+    "Nek2",
+    "Nuf2",
+    "Nusap1",
+    "Bub1",
+    "Tpx2",
+    "Aurka",
+    "Ect2",
+    "Cks1b",
+    "Kif2c",
+    "Cdca8",
+    "Cenpa",
+    "Mki67",
+    "Ccnb2",
+    "Kif23",
+    "Smc4",
+    "G2e3",
+    "Tubb4b",
+    "Anln",
+    "Tacc3",
+    "Dlgap5",
+    "Ckap2",
+    "Ncapd2",
+    "Ttk",
+    "Ckap5",
+    "Cdc25c",
+    "Hjurp",
+    "Cenpe",
+    "Ckap2l",
+    "Cdca2",
+    "Hmgb2",
+    "Cks2",
+    "Psrc1",
+    "Gas2l3"
 ]),
+
     ]),
     html.Div([
         dcc.Graph(id='scatter-plot_db2-5', figure={}, className='three columns',config=config_fig)
@@ -261,11 +313,11 @@ tab3_content = html.Div([
 tab4_content = html.Div([
     html.Div([
             html.Label("Multi gene"),
-            dcc.Dropdown(id='dpdn7', value=["PAX6","TP63","S100A9"], multi=True,
+            dcc.Dropdown(id='dpdn7', value=["Pax6","Krt15","Trp63","Krt14","Krt5","Sox9","Cdk8","Il31ra","Gpha2","Abl1","Areg","Lars2","Calml3","Krt13","Krt19","Psca","Muc20","Muc4","Aqp5","S100a8","S100a9","Lama3","Itgb4","Itga6","Lamc2","Cd44","Cdh1","Thy1","Dcn","Scn7a","Cdh19","Mpz","Ptprc","Cd52","Cd69","Cd86","Rgs5","Des","Myh11","Cd93","Pecam1","Abcg2","Lyve1","Mki67","Top2a","Ube2c","Birc5"], multi=True,
                  options=df.columns),
 ]),
     html.Div([
-        dcc.Graph(id='scatter-plot_db2-12', figure={}, className='four columns',config=config_fig)
+        dcc.Graph(id='scatter-plot-12', figure={}, className='row',style={'width': '100vh', 'height': '90vh'}),  # px)
     ]),
 ])