Spaces:
Sleeping
Sleeping
Ashkan Taghipour (The University of Western Australia) commited on
Commit ·
c62c4d1
1
Parent(s): 2fb0b9f
UI update: Minimalistic diagnosis bars and sample info
Browse files
app.py
CHANGED
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@@ -49,6 +49,22 @@ SAMPLE_DESCRIPTIONS = {
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"Sample 3": "Ventricular Tachycardia - A fast heart rhythm originating from the ventricles, potentially life-threatening.",
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}
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def load_inference_engine():
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"""Load the inference engine on startup."""
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@@ -83,13 +99,14 @@ def get_sample_ecgs():
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return samples
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def analyze_ecg(ecg_signal: np.ndarray, filename: str = "ECG Analysis"):
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"""
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Analyze an ECG signal and return all visualizations.
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Args:
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ecg_signal: ECG signal array
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filename: Name to display
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Returns:
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Tuple of (ecg_plot, diagnosis_plot, risk_plot, summary_text)
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@@ -137,23 +154,44 @@ def analyze_ecg(ecg_signal: np.ndarray, filename: str = "ECG Analysis"):
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else:
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severity_class = "severity-high"
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diagnosis_html += f"""
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-
<div class="diagnosis-
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<
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<
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<
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</div>
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</div>
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"""
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summary = f"""
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<div style="padding: 10px; font-family: 'Inter', -apple-system, BlinkMacSystemFont, sans-serif;">
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<h2 style="margin: 0 0
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<div style="display: inline-block; background: linear-gradient(135deg, #667eea 0%, #764ba2 100%); color: white; padding: 8px 16px; border-radius: 20px; font-size: 0.9em; margin-bottom: 20px;">
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Inference Time: {inference_time:.1f} ms
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@@ -222,7 +260,9 @@ def analyze_sample_by_name(sample_name: str):
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if sample["name"] == sample_name:
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try:
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ecg_signal = np.load(sample["path"])
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-
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except Exception as e:
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logger.error(f"Error loading sample: {e}")
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return None, None, None, f"<p style='color: #dc3545;'>Error loading sample: {str(e)}</p>"
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@@ -371,81 +411,121 @@ def create_demo_interface():
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box-shadow: 0 2px 8px rgba(76, 175, 80, 0.15);
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}
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/*
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.diagnosis-dashboard {
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padding:
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}
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.diagnosis-
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background: linear-gradient(135deg, #ffffff 0%, #f8f9fa 100%);
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border-radius: 16px;
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padding: 20px;
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margin: 12px 0;
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box-shadow: 0 4px 20px rgba(0,0,0,0.08);
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border: 1px solid rgba(0,0,0,0.05);
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transition: transform 0.2s ease, box-shadow 0.2s ease;
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}
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.diagnosis-card:hover {
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transform: translateY(-2px);
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box-shadow: 0 8px 30px rgba(0,0,0,0.12);
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}
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.diagnosis-header {
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display: flex;
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justify-content: space-between;
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align-items: center;
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-
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}
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.diagnosis-rank {
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font-size: 0.
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font-weight: 600;
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color: #
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border-radius: 20px;
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}
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.diagnosis-name {
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font-size:
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font-weight:
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color: #333;
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-
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}
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.diagnosis-
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-
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}
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overflow: hidden;
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}
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height: 100%;
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border-radius:
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}
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background:
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}
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}
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.severity-
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}
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/* Footer Styles */
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@@ -539,11 +619,6 @@ def create_demo_interface():
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info="Click on a sample to select it"
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)
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# Sample descriptions
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gr.Markdown("**Sample Descriptions:**")
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for sample in samples:
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gr.Markdown(f"- **{sample['name']}**: {sample['description']}")
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analyze_sample_btn = gr.Button(
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"🔍 Analyze Selected ECG",
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variant="primary",
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"Sample 3": "Ventricular Tachycardia - A fast heart rhythm originating from the ventricles, potentially life-threatening.",
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}
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# Reverse mapping: display name to real condition info for analysis results
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DISPLAY_TO_CONDITION = {
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"Sample 1": {
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"name": "Atrial Flutter",
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"description": "A rapid but regular atrial rhythm, typically around 250-350 bpm in the atria."
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},
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"Sample 2": {
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"name": "Normal Sinus Rhythm",
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"description": "A healthy heart rhythm with regular beats originating from the sinus node."
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},
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"Sample 3": {
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"name": "Ventricular Tachycardia",
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"description": "A fast heart rhythm originating from the ventricles, potentially life-threatening."
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},
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}
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def load_inference_engine():
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"""Load the inference engine on startup."""
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return samples
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def analyze_ecg(ecg_signal: np.ndarray, filename: str = "ECG Analysis", condition_info: dict = None):
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"""
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Analyze an ECG signal and return all visualizations.
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Args:
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ecg_signal: ECG signal array
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filename: Name to display
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condition_info: Optional dict with 'name' and 'description' for the condition
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Returns:
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Tuple of (ecg_plot, diagnosis_plot, risk_plot, summary_text)
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else:
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severity_class = "severity-high"
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# Create segmented bar with 10 segments
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total_segments = 10
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filled_segments = int(prob_pct / 10)
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segments_html = ""
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for s in range(total_segments):
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if s < filled_segments:
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segments_html += '<div class="bar-segment"></div>'
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else:
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segments_html += '<div class="bar-segment empty"></div>'
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diagnosis_html += f"""
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<div class="diagnosis-row {severity_class}">
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<span class="diagnosis-rank">#{i}</span>
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<span class="diagnosis-name" title="{class_names[idx]}">{class_names[idx]}</span>
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<div class="diagnosis-bar-container">
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<div class="diagnosis-bar-segments">{segments_html}</div>
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<div class="diagnosis-bar-track">
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<div class="diagnosis-bar-fill" style="width: {prob_pct}%;"></div>
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</div>
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</div>
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<span class="diagnosis-percent">{prob_pct:.1f}%</span>
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</div>
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"""
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# Determine display title and description
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if condition_info:
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display_title = condition_info.get("name", filename)
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condition_desc = condition_info.get("description", "")
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condition_html = f'<p style="color: #666; font-size: 0.95em; margin: 8px 0 16px 0; font-style: italic;">{condition_desc}</p>' if condition_desc else ""
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else:
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display_title = filename
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condition_html = ""
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summary = f"""
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<div style="padding: 10px; font-family: 'Inter', -apple-system, BlinkMacSystemFont, sans-serif;">
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<h2 style="margin: 0 0 8px 0; color: #333;">Analysis Results: {display_title}</h2>
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{condition_html}
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<div style="display: inline-block; background: linear-gradient(135deg, #667eea 0%, #764ba2 100%); color: white; padding: 8px 16px; border-radius: 20px; font-size: 0.9em; margin-bottom: 20px;">
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Inference Time: {inference_time:.1f} ms
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if sample["name"] == sample_name:
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try:
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ecg_signal = np.load(sample["path"])
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# Get the real condition info for display
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condition_info = DISPLAY_TO_CONDITION.get(sample_name)
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return analyze_ecg(ecg_signal, sample["name"], condition_info)
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except Exception as e:
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logger.error(f"Error loading sample: {e}")
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return None, None, None, f"<p style='color: #dc3545;'>Error loading sample: {str(e)}</p>"
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box-shadow: 0 2px 8px rgba(76, 175, 80, 0.15);
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}
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/* Minimalistic Diagnosis Styles */
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.diagnosis-dashboard {
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padding: 12px 0;
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font-family: 'SF Mono', 'Monaco', 'Inconsolata', 'Roboto Mono', monospace;
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}
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.diagnosis-row {
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display: flex;
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align-items: center;
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padding: 8px 12px;
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margin: 4px 0;
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background: #fafafa;
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border-radius: 6px;
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transition: background 0.15s ease;
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}
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.diagnosis-row:hover {
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background: #f0f0f0;
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}
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.diagnosis-rank {
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font-size: 0.8em;
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font-weight: 600;
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color: #888;
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width: 28px;
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flex-shrink: 0;
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}
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.diagnosis-name {
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font-size: 0.9em;
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font-weight: 500;
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color: #333;
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width: 160px;
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flex-shrink: 0;
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white-space: nowrap;
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overflow: hidden;
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text-overflow: ellipsis;
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}
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.diagnosis-bar-container {
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flex: 1;
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display: flex;
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align-items: center;
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margin: 0 12px;
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height: 16px;
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position: relative;
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}
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.diagnosis-bar-track {
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width: 100%;
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height: 3px;
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background: #e0e0e0;
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border-radius: 2px;
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position: relative;
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overflow: hidden;
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}
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.diagnosis-bar-fill {
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height: 100%;
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border-radius: 2px;
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transition: width 0.5s ease;
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}
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.diagnosis-bar-segments {
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position: absolute;
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top: 0;
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left: 0;
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height: 100%;
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display: flex;
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gap: 2px;
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}
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.bar-segment {
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width: 3px;
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height: 100%;
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border-radius: 1px;
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opacity: 0.9;
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}
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.bar-segment.empty {
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background: #e0e0e0;
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opacity: 0.5;
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}
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.diagnosis-percent {
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font-size: 0.85em;
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font-weight: 600;
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width: 55px;
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text-align: right;
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flex-shrink: 0;
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}
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/* Color classes for severity */
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.severity-low .bar-segment:not(.empty),
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.severity-low .diagnosis-bar-fill {
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background: #20c997;
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}
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.severity-low .diagnosis-percent {
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color: #20c997;
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}
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.severity-medium .bar-segment:not(.empty),
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.severity-medium .diagnosis-bar-fill {
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background: #f0ad4e;
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}
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.severity-medium .diagnosis-percent {
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color: #e09000;
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}
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.severity-high .bar-segment:not(.empty),
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.severity-high .diagnosis-bar-fill {
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background: #e74c3c;
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}
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.severity-high .diagnosis-percent {
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color: #e74c3c;
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}
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/* Footer Styles */
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info="Click on a sample to select it"
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)
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analyze_sample_btn = gr.Button(
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"🔍 Analyze Selected ECG",
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variant="primary",
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