""" Enhanced Active Learning Manager with Database Persistence This module provides a comprehensive active learning system with optional database persistence, model saving, LLM integration, and multiple query strategies including uncertainty sampling, diversity sampling, BADGE, BALD, and hybrid combinations. References: [1] Ash et al. (2020) "Deep Batch Active Learning by Diverse, Uncertain Gradient Lower Bounds" (BADGE). ICLR 2020. [2] Houlsby et al. (2011) "Bayesian Active Learning for Classification and Preference Learning" (BALD). [3] Bayer et al. (2024) "ActiveLLM: Large Language Model-Based Active Learning for Textual Few-Shot Scenarios". TACL. [4] Yuan et al. (2024) "Hide and Seek in Noise Labels: Noise-Robust Collaborative Active Learning" (NoiseAL). ACL 2024. [5] Mavromatis et al. (2024) "CoverICL: Selective Annotation for In-Context Learning via Active Graph Coverage". EMNLP 2024. """ import threading import logging import time import os import pickle import json from typing import Dict, List, Optional, Tuple, Any, Union from collections import defaultdict, Counter import dataclasses from dataclasses import dataclass, field, asdict from enum import Enum import random import queue from datetime import datetime from abc import ABC, abstractmethod from sklearn.pipeline import Pipeline from sklearn.feature_extraction.text import CountVectorizer, TfidfVectorizer from sklearn.linear_model import LogisticRegression from sklearn.ensemble import RandomForestClassifier from sklearn.svm import SVC from sklearn.metrics import accuracy_score, classification_report import numpy as np from potato.item_state_management import ItemStateManager, get_item_state_manager from potato.user_state_management import get_user_state_manager logger = logging.getLogger(__name__) class ResolutionStrategy(Enum): """Strategies for resolving multiple annotations per instance.""" MAJORITY_VOTE = "majority_vote" RANDOM = "random" CONSENSUS = "consensus" WEIGHTED_AVERAGE = "weighted_average" # --------------------------------------------------------------------------- # SentenceTransformerVectorizer # --------------------------------------------------------------------------- class SentenceTransformerVectorizer: """sklearn-compatible wrapper for sentence-transformers. Uses dense embeddings from pre-trained transformer models instead of bag-of-words features. Produces 384-dim vectors (for default model) that capture semantic meaning, enabling better classification with fewer training examples. The ``sentence-transformers`` package is an **optional** dependency and is only imported when this vectorizer is actually used. """ def __init__(self, model_name: str = "all-MiniLM-L6-v2"): self.model_name = model_name self._model = None def fit(self, X, y=None): from sentence_transformers import SentenceTransformer self._model = SentenceTransformer(self.model_name) return self def transform(self, X): if self._model is None: raise RuntimeError("SentenceTransformerVectorizer has not been fitted yet") return self._model.encode(list(X), show_progress_bar=False) def fit_transform(self, X, y=None): self.fit(X, y) return self.transform(X) # --------------------------------------------------------------------------- # Query Strategies # --------------------------------------------------------------------------- class QueryStrategy(ABC): """Base class for active learning query strategies.""" @abstractmethod def rank(self, texts: List[str], model, vectorizer, annotated_texts: Optional[List[str]] = None) -> List[Tuple[int, float]]: """Return list of (index, score) sorted by selection priority (highest first).""" class UncertaintySampling(QueryStrategy): """Select instances where classifier is least confident. Selects x* = argmax_x (1 - max_y P(y|x)), i.e., instances where the model's best guess has lowest confidence. """ def rank(self, texts, model, vectorizer, annotated_texts=None): try: features = vectorizer.transform(texts) probas = model.predict_proba(features) # Score = 1 - max_prob (higher = more uncertain = higher priority) scores = 1.0 - np.max(probas, axis=1) ranked = sorted(enumerate(scores), key=lambda x: x[1], reverse=True) return ranked except Exception as e: logger.warning(f"UncertaintySampling failed: {e}") return [(i, 0.5) for i in range(len(texts))] class DiversitySampling(QueryStrategy): """Select instances that maximize feature-space coverage. Uses cosine distance from already-annotated instances in the vectorized feature space. Ensures the training set covers the full data distribution rather than over-sampling one region. """ def rank(self, texts, model, vectorizer, annotated_texts=None): from sklearn.metrics.pairwise import cosine_distances try: features = vectorizer.transform(texts) if hasattr(features, 'toarray'): features = features.toarray() if annotated_texts: annotated_features = vectorizer.transform(annotated_texts) if hasattr(annotated_features, 'toarray'): annotated_features = annotated_features.toarray() # Score = min cosine distance to any annotated instance distances = cosine_distances(features, annotated_features) scores = np.min(distances, axis=1) else: # No annotated texts yet: use distance from centroid centroid = np.mean(features, axis=0, keepdims=True) scores = cosine_distances(features, centroid).ravel() ranked = sorted(enumerate(scores), key=lambda x: x[1], reverse=True) return ranked except Exception as e: logger.warning(f"DiversitySampling failed: {e}") return [(i, 0.5) for i in range(len(texts))] class BadgeStrategy(QueryStrategy): """BADGE approximation: uncertainty-weighted diversity. Inspired by Ash et al. (2020) [Ref 1]. Full BADGE uses gradient embeddings from neural networks. Our approximation: 1. Weight feature vectors by (1 - max_prob) as uncertainty proxy 2. Run k-means++ initialization on weighted vectors to select diverse-uncertain instances. """ def rank(self, texts, model, vectorizer, annotated_texts=None): try: features = vectorizer.transform(texts) if hasattr(features, 'toarray'): features = features.toarray() probas = model.predict_proba(features) uncertainty = 1.0 - np.max(probas, axis=1) # Weight features by uncertainty weighted = features * uncertainty[:, np.newaxis] # Use k-means++ initialization to select diverse-uncertain points from sklearn.cluster import kmeans_plusplus n_clusters = min(len(texts), max(1, len(texts) // 2)) _, indices = kmeans_plusplus(weighted, n_clusters=n_clusters, random_state=42) # Build score: selected centroids get highest scores scores = np.zeros(len(texts)) for rank_pos, idx in enumerate(indices): scores[idx] = len(indices) - rank_pos # highest for first-selected # For non-selected, use uncertainty as tiebreaker for i in range(len(texts)): if scores[i] == 0: scores[i] = uncertainty[i] * 0.01 ranked = sorted(enumerate(scores), key=lambda x: x[1], reverse=True) return ranked except Exception as e: logger.warning(f"BadgeStrategy failed, falling back to uncertainty: {e}") return UncertaintySampling().rank(texts, model, vectorizer, annotated_texts) class BaldStrategy(QueryStrategy): """BALD: Bayesian Active Learning by Disagreement. Based on Houlsby et al. (2011) [Ref 2]. Trains an ensemble of classifiers with different random seeds/bootstrap samples. Selects instances with highest mutual information: H[y|x] - E_theta[H[y|x,theta]], i.e., where the ensemble disagrees most. """ def __init__(self, n_estimators: int = 5, bootstrap_fraction: float = 0.8): self.n_estimators = n_estimators self.bootstrap_fraction = bootstrap_fraction def rank(self, texts, model, vectorizer, annotated_texts=None): try: features = vectorizer.transform(texts) if hasattr(features, 'toarray'): features = features.toarray() probas = model.predict_proba(features) # Average entropy avg_proba = probas entropy_avg = -np.sum(avg_proba * np.log(avg_proba + 1e-10), axis=1) # For a single model, we approximate BALD by using dropout-like noise # or by comparing with uniform. Since we store the ensemble models # on the manager, we just use the single model's entropy here and # the ensemble version is handled in ActiveLearningManager._train_bald_ensemble scores = entropy_avg ranked = sorted(enumerate(scores), key=lambda x: x[1], reverse=True) return ranked except Exception as e: logger.warning(f"BaldStrategy failed: {e}") return [(i, 0.5) for i in range(len(texts))] def rank_with_ensemble(self, texts, ensemble_models, vectorizer): """Rank using actual ensemble disagreement (mutual information).""" try: features = vectorizer.transform(texts) if hasattr(features, 'toarray'): features = features.toarray() all_probas = [] for m in ensemble_models: all_probas.append(m.predict_proba(features)) all_probas = np.array(all_probas) # (n_estimators, n_samples, n_classes) # Mean prediction across ensemble mean_proba = np.mean(all_probas, axis=0) # (n_samples, n_classes) # H[y|x] - entropy of mean prediction entropy_mean = -np.sum(mean_proba * np.log(mean_proba + 1e-10), axis=1) # E_theta[H[y|x,theta]] - mean of individual entropies individual_entropies = -np.sum(all_probas * np.log(all_probas + 1e-10), axis=2) mean_entropy = np.mean(individual_entropies, axis=0) # Mutual information = H[y|x] - E[H[y|x,theta]] mutual_info = entropy_mean - mean_entropy ranked = sorted(enumerate(mutual_info), key=lambda x: x[1], reverse=True) return ranked except Exception as e: logger.warning(f"BaldStrategy ensemble ranking failed: {e}") return [(i, 0.5) for i in range(len(texts))] class HybridStrategy(QueryStrategy): """Weighted combination of uncertainty and diversity scores. Combines strategies with configurable weights. Default: 0.7 uncertainty + 0.3 diversity. """ def __init__(self, weights: Optional[Dict[str, float]] = None): self.weights = weights or {"uncertainty": 0.7, "diversity": 0.3} def rank(self, texts, model, vectorizer, annotated_texts=None): try: strategies = {} if self.weights.get("uncertainty", 0) > 0: strategies["uncertainty"] = UncertaintySampling() if self.weights.get("diversity", 0) > 0: strategies["diversity"] = DiversitySampling() # Collect raw scores from each strategy all_scores = {} for name, strategy in strategies.items(): rankings = strategy.rank(texts, model, vectorizer, annotated_texts) score_map = {idx: score for idx, score in rankings} all_scores[name] = score_map # Normalize each strategy's scores to [0, 1] for name in all_scores: vals = list(all_scores[name].values()) min_val, max_val = min(vals), max(vals) rng = max_val - min_val if max_val > min_val else 1.0 all_scores[name] = { idx: (s - min_val) / rng for idx, s in all_scores[name].items() } # Weighted combination combined = {} for i in range(len(texts)): combined[i] = sum( self.weights.get(name, 0) * all_scores.get(name, {}).get(i, 0) for name in self.weights ) ranked = sorted(combined.items(), key=lambda x: x[1], reverse=True) return ranked except Exception as e: logger.warning(f"HybridStrategy failed: {e}") return UncertaintySampling().rank(texts, model, vectorizer, annotated_texts) # Strategy registry STRATEGY_REGISTRY = { "uncertainty": UncertaintySampling, "diversity": DiversitySampling, "badge": BadgeStrategy, "bald": BaldStrategy, "hybrid": HybridStrategy, } def create_query_strategy(config: 'ActiveLearningConfig') -> QueryStrategy: """Create a query strategy from config.""" strategy_name = config.query_strategy if strategy_name == "hybrid": return HybridStrategy(weights=config.hybrid_weights) elif strategy_name == "bald": params = config.bald_params return BaldStrategy( n_estimators=params.get("n_estimators", 5), bootstrap_fraction=params.get("bootstrap_fraction", 0.8), ) elif strategy_name in STRATEGY_REGISTRY: return STRATEGY_REGISTRY[strategy_name]() else: logger.warning(f"Unknown strategy '{strategy_name}', falling back to uncertainty") return UncertaintySampling() # --------------------------------------------------------------------------- # ICLClassifier wrapper (Phase 5A) # --------------------------------------------------------------------------- class ICLClassifier: """Wraps ICLLabeler as an sklearn-compatible classifier for ensemble use. Enables combining LLM-based ICL predictions with traditional classifier predictions in a hybrid ensemble for active learning scoring. """ def __init__(self, icl_labeler, schema_name: str, label_names: List[str]): self.icl_labeler = icl_labeler self.schema_name = schema_name self.label_names = label_names self.classes_ = np.array(label_names) def predict_proba(self, texts: List[str]) -> np.ndarray: """Get label probabilities from LLM via ICL.""" n_classes = len(self.label_names) probas = np.full((len(texts), n_classes), 1.0 / n_classes) for i, text in enumerate(texts): try: prediction = self.icl_labeler.label_instance( instance_id=f"_al_query_{i}", schema_name=self.schema_name, instance_text=text, ) if prediction and prediction.predicted_label in self.label_names: idx = self.label_names.index(prediction.predicted_label) conf = prediction.confidence_score # Distribute: conf to predicted label, (1-conf)/(n-1) to others remaining = (1.0 - conf) / max(1, n_classes - 1) probas[i] = remaining probas[i, idx] = conf except Exception: pass # Keep uniform distribution return probas # --------------------------------------------------------------------------- # Configuration # --------------------------------------------------------------------------- @dataclass class ActiveLearningConfig: """Enhanced configuration for active learning.""" enabled: bool = False classifier_name: str = "sklearn.linear_model.LogisticRegression" classifier_kwargs: Dict[str, Any] = None vectorizer_name: str = "sklearn.feature_extraction.text.TfidfVectorizer" vectorizer_kwargs: Dict[str, Any] = None min_annotations_per_instance: int = 1 min_instances_for_training: int = 10 max_instances_to_reorder: Optional[int] = None resolution_strategy: ResolutionStrategy = ResolutionStrategy.MAJORITY_VOTE random_sample_percent: float = 0.2 update_frequency: int = 5 schema_names: List[str] = None # Classifier/vectorizer passthrough params (Phase 1C) classifier_params: Dict[str, Any] = field(default_factory=dict) vectorizer_params: Dict[str, Any] = field(default_factory=dict) # Probability calibration (Phase 1D) calibrate_probabilities: bool = True # Query strategy (Phase 2) query_strategy: str = "uncertainty" hybrid_weights: Dict[str, float] = field( default_factory=lambda: {"uncertainty": 0.7, "diversity": 0.3} ) bald_params: Dict[str, Any] = field( default_factory=lambda: {"n_estimators": 5, "bootstrap_fraction": 0.8} ) # Cold-start (Phase 3) cold_start_strategy: str = "random" cold_start_batch_size: int = 20 # ICL ensemble (Phase 5) use_icl_ensemble: bool = False icl_ensemble_params: Dict[str, Any] = field(default_factory=lambda: { "initial_icl_weight": 0.7, "final_icl_weight": 0.2, "transition_instances": 100, }) # Annotation routing (Phase 5D) annotation_routing: bool = False routing_thresholds: Dict[str, float] = field(default_factory=lambda: { "auto_label_min_confidence": 0.9, "show_suggestion_below": 0.5, }) verification_sample_rate: float = 0.2 # Database persistence database_enabled: bool = False database_config: Dict[str, Any] = None # Model persistence model_persistence_enabled: bool = False model_save_directory: Optional[str] = None model_retention_count: int = 2 # LLM integration llm_enabled: bool = False llm_config: Dict[str, Any] = None def __post_init__(self): if self.classifier_kwargs is None: self.classifier_kwargs = {} if self.vectorizer_kwargs is None: self.vectorizer_kwargs = {} if self.schema_names is None: self.schema_names = [] if self.database_config is None: self.database_config = {} if self.llm_config is None: self.llm_config = {} # Merge classifier_params into classifier_kwargs if self.classifier_params: self.classifier_kwargs.update(self.classifier_params) # Merge vectorizer_params into vectorizer_kwargs if self.vectorizer_params: self.vectorizer_kwargs.update(self.vectorizer_params) @dataclass class TrainingMetrics: """Metrics for a training run.""" schema_name: str training_time: float accuracy: float instance_count: int timestamp: datetime model_file_path: Optional[str] = None confidence_distribution: Dict[str, float] = None error_message: Optional[str] = None class ModelPersistence: """Handles model saving and loading with metadata.""" def __init__(self, save_directory: str, retention_count: int = 2): self.save_directory = save_directory self.retention_count = retention_count self.logger = logging.getLogger(__name__) # Ensure directory exists os.makedirs(save_directory, exist_ok=True) def save_model(self, model: Pipeline, schema_name: str, instance_count: int) -> str: """Save a trained model with metadata.""" timestamp = datetime.now().strftime("%Y%m%d_%H%M%S") filename = f"{schema_name}_{instance_count}_{timestamp}.pkl" filepath = os.path.join(self.save_directory, filename) try: # Save the complete model (including vectorizer) with open(filepath, 'wb') as f: pickle.dump(model, f) self.logger.info(f"Saved model to {filepath}") # Clean up old models self._cleanup_old_models(schema_name) return filepath except Exception as e: self.logger.error(f"Failed to save model: {e}") raise def load_model(self, filepath: str) -> Optional[Pipeline]: """Load a saved model.""" try: with open(filepath, 'rb') as f: model = pickle.load(f) # TODO: Add schema validation here in the future # This is a placeholder for future schema validation enhancement self.logger.info(f"Loaded model from {filepath}") return model except Exception as e: self.logger.error(f"Failed to load model from {filepath}: {e}") return None def _cleanup_old_models(self, schema_name: str): """Clean up old models based on retention policy.""" try: # Find all model files for this schema model_files = [] for filename in os.listdir(self.save_directory): if filename.startswith(f"{schema_name}_") and filename.endswith(".pkl"): filepath = os.path.join(self.save_directory, filename) model_files.append((filepath, os.path.getmtime(filepath))) # Sort by modification time (newest first) model_files.sort(key=lambda x: x[1], reverse=True) # Remove old models beyond retention count for filepath, _ in model_files[self.retention_count:]: try: os.remove(filepath) self.logger.info(f"Removed old model: {filepath}") except Exception as e: self.logger.warning(f"Failed to remove old model {filepath}: {e}") except Exception as e: self.logger.error(f"Error during model cleanup: {e}") class DatabaseStateManager: """Manages database persistence for active learning state.""" def __init__(self, config: Dict[str, Any]): self.config = config self.logger = logging.getLogger(__name__) self.connection = None self._initialize_database() def _initialize_database(self): """Initialize database connection and create tables.""" try: # Use the same database system as main Potato application if self.config.get('type') == 'mysql': self._init_mysql_connection() else: self._init_file_based_connection() self._create_tables() self.logger.info("Active learning database initialized successfully") except Exception as e: self.logger.error(f"Failed to initialize database: {e}") raise def _init_mysql_connection(self): """Initialize MySQL connection.""" # TODO: Implement MySQL connection pass def _init_file_based_connection(self): """Initialize file-based database connection.""" # TODO: Implement file-based database pass def _create_tables(self): """Create database tables for active learning.""" # TODO: Implement table creation pass def save_training_metrics(self, metrics: TrainingMetrics): """Save training metrics to database.""" # TODO: Implement metrics saving pass def get_training_history(self, schema_name: Optional[str] = None) -> List[TrainingMetrics]: """Get training history from database.""" # TODO: Implement history retrieval return [] def save_schema_cycling_state(self, current_schema: str, schema_order: List[str]): """Save current schema cycling state.""" # TODO: Implement state saving pass def get_schema_cycling_state(self) -> Tuple[str, List[str]]: """Get current schema cycling state.""" # TODO: Implement state retrieval return "", [] class SchemaCycler: """Manages cycling through multiple annotation schemes.""" def __init__(self, schema_names: List[str], database_manager: Optional[DatabaseStateManager] = None): self.schema_names = self._validate_schemas(schema_names) self.database_manager = database_manager self.current_index = 0 self.logger = logging.getLogger(__name__) self._lock = threading.Lock() # Load state from database if available if self.database_manager: self._load_state() def _validate_schemas(self, schema_names: List[str]) -> List[str]: """Validate and filter schema names.""" valid_schemas = [] for schema in schema_names: # Exclude text and span annotation schemes if schema in ['text', 'span']: raise ValueError(f"Text and span annotation schemes are not supported for active learning: {schema}") valid_schemas.append(schema) return valid_schemas def _load_state(self): """Load cycling state from database.""" try: current_schema, schema_order = self.database_manager.get_schema_cycling_state() with self._lock: if current_schema in self.schema_names: self.current_index = self.schema_names.index(current_schema) except Exception as e: self.logger.warning(f"Failed to load schema cycling state: {e}") def get_current_schema(self) -> Optional[str]: """Get the current schema for training.""" if not self.schema_names: return None with self._lock: return self.schema_names[self.current_index] def advance_schema(self): """Advance to the next schema in the cycle.""" if not self.schema_names: return with self._lock: self.current_index = (self.current_index + 1) % len(self.schema_names) current_schema = self.schema_names[self.current_index] # Save state to database if available if self.database_manager: try: self.database_manager.save_schema_cycling_state( current_schema, self.schema_names ) except Exception as e: self.logger.warning(f"Failed to save schema cycling state: {e}") def get_schema_order(self) -> List[str]: """Get the current schema cycling order.""" return self.schema_names.copy() class ActiveLearningManager: """ Manages active learning operations including classifier training and instance reordering. This class provides thread-safe operations for: - Training classifiers on annotated data - Predicting confidence scores for unlabeled instances - Reordering instances based on configurable query strategies - Cold-start LLM-based instance selection - ICL/classifier ensemble for improved ranking - Noise-aware annotation routing - Managing training state and progress - Database persistence and model saving """ def __init__(self, config: ActiveLearningConfig): self.config = config self.logger = logging.getLogger(__name__) # Thread safety self._lock = threading.RLock() self._training_queue = queue.Queue() self._training_thread = None self._stop_training = threading.Event() # State tracking self._last_training_time = 0 self._training_count = 0 self._models = {} # schema_name -> trained_model self._vectorizers = {} # schema_name -> fitted vectorizer self._bald_ensembles = {} # schema_name -> list of classifiers self._last_annotation_count = 0 self._training_metrics = [] # List of TrainingMetrics self._annotated_texts = {} # schema_name -> list of annotated texts # Query strategy self._query_strategy = create_query_strategy(config) # Database and persistence self.database_manager = None self.model_persistence = None self.schema_cycler = None # Initialize components self._initialize_components() # Start training thread if enabled if self.config.enabled: self._start_training_thread() def _initialize_components(self): """Initialize database, model persistence, and schema cycler.""" # Initialize database manager if enabled if self.config.database_enabled: try: self.database_manager = DatabaseStateManager(self.config.database_config) except Exception as e: self.logger.error(f"Failed to initialize database manager: {e}") # Continue without database persistence # Initialize model persistence if enabled if self.config.model_persistence_enabled and self.config.model_save_directory: try: self.model_persistence = ModelPersistence( self.config.model_save_directory, self.config.model_retention_count ) except Exception as e: self.logger.error(f"Failed to initialize model persistence: {e}") # Continue without model persistence # Initialize schema cycler try: self.schema_cycler = SchemaCycler(self.config.schema_names, self.database_manager) except Exception as e: self.logger.error(f"Failed to initialize schema cycler: {e}") raise # Schema cycler is critical def _start_training_thread(self): """Start the background training thread.""" if self._training_thread is None or not self._training_thread.is_alive(): self._training_thread = threading.Thread(target=self._training_worker, daemon=True) self._training_thread.start() self.logger.info("Active learning training thread started") def _training_worker(self): """Background worker for training classifiers.""" while not self._stop_training.is_set(): try: # Wait for training request training_request = self._training_queue.get(timeout=1.0) if training_request is None: # Shutdown signal break self._perform_training() self._training_queue.task_done() except queue.Empty: continue except Exception as e: self.logger.error(f"Error in training worker: {e}") def _perform_training(self): """Perform the actual classifier training.""" with self._lock: try: self.logger.info("Starting active learning classifier training") start_time = time.time() # Get current schema for training current_schema = self.schema_cycler.get_current_schema() if not current_schema: self.logger.warning("No schema available for training") return # Get current annotation state item_manager = get_item_state_manager() user_manager = get_user_state_manager() # Collect training data training_data = self._collect_training_data(item_manager, user_manager, current_schema) if not training_data: self.logger.warning(f"No training data available for schema {current_schema}") # If in cold-start phase, try LLM-based reordering if self.config.cold_start_strategy == "llm" and self.config.llm_enabled: self._cold_start_reorder(item_manager) return # Train classifier model, metrics = self._train_classifier(training_data, current_schema) if model: self._models[current_schema] = model self._annotated_texts[current_schema] = training_data["texts"] # Save model if persistence is enabled if self.model_persistence: try: model_path = self.model_persistence.save_model( model, current_schema, len(training_data["texts"]) ) metrics.model_file_path = model_path except Exception as e: self.logger.error(f"Failed to save model: {e}") # Save metrics to database if available if self.database_manager: try: self.database_manager.save_training_metrics(metrics) except Exception as e: self.logger.error(f"Failed to save metrics: {e}") # Reorder instances self._reorder_instances(item_manager, current_schema) # Advance to next schema self.schema_cycler.advance_schema() self._training_count += 1 self._last_training_time = time.time() training_duration = time.time() - start_time self.logger.info(f"Active learning training completed for schema {current_schema} " f"(run #{self._training_count}, duration: {training_duration:.2f}s)") else: self.logger.warning(f"Failed to train model for schema {current_schema}") # Try cold-start if not enough data if (self.config.cold_start_strategy == "llm" and self.config.llm_enabled and len(training_data.get("texts", [])) < self.config.min_instances_for_training): self._cold_start_reorder(item_manager) except Exception as e: self.logger.error(f"Error during training: {e}") # Continue without failing the entire system def _collect_training_data(self, item_manager: ItemStateManager, user_manager, schema_name: str) -> Dict: """Collect training data for a specific schema.""" training_data = {"texts": [], "labels": [], "instance_ids": []} # Get all user states user_states = user_manager.get_all_users() self.logger.debug(f"Found {len(user_states)} user states") # Collect annotations per instance instance_annotations = defaultdict(list) for user_state in user_states: user_annotations = user_state.get_all_annotations() self.logger.debug(f"User {user_state.user_id} has {len(user_annotations)} annotations") for instance_id, annotations in user_annotations.items(): # Check if the schema exists in the labels section if 'labels' in annotations: labels_dict = annotations['labels'] # Handle Label objects as keys for label_obj, value in labels_dict.items(): if hasattr(label_obj, 'get_schema') and label_obj.get_schema() == schema_name: instance_annotations[instance_id].append({ "label": label_obj.get_name(), "value": value, "user": user_state.user_id }) self.logger.debug(f"Collected annotations for {len(instance_annotations)} instances") # Filter instances with sufficient annotations for instance_id, annotations in instance_annotations.items(): if len(annotations) >= self.config.min_annotations_per_instance: # Resolve multiple annotations resolved_label = self._resolve_annotations(annotations) if resolved_label: item = item_manager.get_item(instance_id) if item: text = item.get_text() training_data["texts"].append(text) training_data["labels"].append(resolved_label) training_data["instance_ids"].append(instance_id) self.logger.debug(f"Training data collected: {len(training_data['texts'])} texts, {len(training_data['labels'])} labels") return training_data def _resolve_annotations(self, annotations: List[Dict]) -> Optional[str]: """Resolve multiple annotations using the configured strategy.""" if not annotations: return None if self.config.resolution_strategy == ResolutionStrategy.MAJORITY_VOTE: return self._majority_vote(annotations) elif self.config.resolution_strategy == ResolutionStrategy.RANDOM: return self._random_selection(annotations) elif self.config.resolution_strategy == ResolutionStrategy.CONSENSUS: return self._consensus_resolution(annotations) else: return self._majority_vote(annotations) # Default fallback def _majority_vote(self, annotations: List[Dict]) -> str: """Resolve annotations using majority vote with random tie-breaking.""" label_counts = Counter(ann["label"] for ann in annotations) max_count = max(label_counts.values()) # Find all labels with the maximum count (handles ties) tied_labels = [label for label, count in label_counts.items() if count == max_count] # Break ties randomly return random.choice(tied_labels) def _random_selection(self, annotations: List[Dict]) -> str: """Resolve annotations by random selection.""" return random.choice(annotations)["label"] def _consensus_resolution(self, annotations: List[Dict]) -> Optional[str]: """Resolve annotations by consensus (all must agree).""" labels = [ann["label"] for ann in annotations] if len(set(labels)) == 1: return labels[0] return None def _train_classifier(self, training_data: Dict, schema_name: str) -> Tuple[Optional[Pipeline], TrainingMetrics]: """Train a classifier for a specific schema.""" start_time = time.time() if len(training_data["texts"]) < self.config.min_instances_for_training: error_msg = f"Insufficient training data for schema {schema_name}: {len(training_data['texts'])} < {self.config.min_instances_for_training}" self.logger.warning(error_msg) return None, TrainingMetrics( schema_name=schema_name, training_time=time.time() - start_time, accuracy=0.0, instance_count=len(training_data["texts"]), timestamp=datetime.now(), error_message=error_msg ) # Check for sufficient label diversity unique_labels = set(training_data["labels"]) if len(unique_labels) < 2: error_msg = f"Insufficient label diversity for schema {schema_name}: {len(unique_labels)} unique labels" self.logger.warning(error_msg) return None, TrainingMetrics( schema_name=schema_name, training_time=time.time() - start_time, accuracy=0.0, instance_count=len(training_data["texts"]), timestamp=datetime.now(), error_message=error_msg ) try: # Create and train classifier classifier = self._create_classifier() vectorizer = self._create_vectorizer() pipeline = Pipeline([ ("vectorizer", vectorizer), ("classifier", classifier) ]) pipeline.fit(training_data["texts"], training_data["labels"]) # Apply probability calibration if enabled if self.config.calibrate_probabilities and hasattr(classifier, 'predict_proba'): num_samples = len(training_data["texts"]) if num_samples >= 5: try: from sklearn.calibration import CalibratedClassifierCV cv_folds = min(3, num_samples // 2) if cv_folds >= 2: calibrated = CalibratedClassifierCV( pipeline, cv=cv_folds, method='isotonic' ) calibrated.fit(training_data["texts"], training_data["labels"]) pipeline = calibrated self.logger.debug(f"Applied probability calibration with {cv_folds}-fold CV") except Exception as e: self.logger.warning(f"Calibration failed, using uncalibrated model: {e}") # Store vectorizer separately for strategy use self._vectorizers[schema_name] = pipeline.named_steps.get("vectorizer", vectorizer) if hasattr(pipeline, 'named_steps') else vectorizer # Train BALD ensemble if needed if self.config.query_strategy == "bald": self._train_bald_ensemble(training_data, schema_name) # Calculate accuracy predictions = pipeline.predict(training_data["texts"]) accuracy = accuracy_score(training_data["labels"], predictions) # Calculate confidence distribution confidence_distribution = self._calculate_confidence_distribution(pipeline, training_data["texts"]) training_time = time.time() - start_time metrics = TrainingMetrics( schema_name=schema_name, training_time=training_time, accuracy=accuracy, instance_count=len(training_data["texts"]), timestamp=datetime.now(), confidence_distribution=confidence_distribution ) self.logger.info(f"Trained classifier for schema {schema_name} with {len(training_data['texts'])} instances, " f"accuracy: {accuracy:.3f}, time: {training_time:.2f}s") return pipeline, metrics except Exception as e: error_msg = f"Error training classifier for schema {schema_name}: {e}" self.logger.error(error_msg) return None, TrainingMetrics( schema_name=schema_name, training_time=time.time() - start_time, accuracy=0.0, instance_count=len(training_data["texts"]), timestamp=datetime.now(), error_message=error_msg ) def _train_bald_ensemble(self, training_data: Dict, schema_name: str): """Train an ensemble of classifiers for BALD strategy.""" params = self.config.bald_params n_estimators = params.get("n_estimators", 5) bootstrap_fraction = params.get("bootstrap_fraction", 0.8) texts = training_data["texts"] labels = training_data["labels"] n_samples = len(texts) bootstrap_size = max(2, int(n_samples * bootstrap_fraction)) ensemble = [] for i in range(n_estimators): indices = np.random.choice(n_samples, size=bootstrap_size, replace=True) boot_texts = [texts[j] for j in indices] boot_labels = [labels[j] for j in indices] # Need at least 2 classes if len(set(boot_labels)) < 2: continue clf = self._create_classifier() vec = self._create_vectorizer() pipe = Pipeline([("vectorizer", vec), ("classifier", clf)]) pipe.fit(boot_texts, boot_labels) ensemble.append(pipe) if ensemble: self._bald_ensembles[schema_name] = ensemble self.logger.info(f"Trained BALD ensemble with {len(ensemble)} models for {schema_name}") def _calculate_confidence_distribution(self, pipeline, texts: List[str]) -> Dict[str, float]: """Calculate confidence score distribution.""" try: probas = pipeline.predict_proba(texts) max_confidences = np.max(probas, axis=1) # Create histogram bins bins = [0.0, 0.2, 0.4, 0.6, 0.8, 1.0] hist, _ = np.histogram(max_confidences, bins=bins) # Convert to percentages total = len(max_confidences) distribution = {} for i, count in enumerate(hist): bin_label = f"{bins[i]:.1f}-{bins[i+1]:.1f}" distribution[bin_label] = (count / total) * 100 if total > 0 else 0 return distribution except Exception as e: self.logger.warning(f"Failed to calculate confidence distribution: {e}") return {} def _create_classifier(self): """Create classifier instance based on configuration.""" kwargs = dict(self.config.classifier_kwargs) if self.config.classifier_name == "sklearn.linear_model.LogisticRegression": return LogisticRegression(**kwargs) elif self.config.classifier_name == "sklearn.ensemble.RandomForestClassifier": return RandomForestClassifier(**kwargs) elif self.config.classifier_name == "sklearn.svm.SVC": kwargs.setdefault("probability", True) return SVC(**kwargs) else: # Try to import dynamically try: module_name, class_name = self.config.classifier_name.rsplit('.', 1) module = __import__(module_name, fromlist=[class_name]) classifier_class = getattr(module, class_name) return classifier_class(**kwargs) except Exception as e: self.logger.error(f"Failed to create classifier {self.config.classifier_name}: {e}") return LogisticRegression() # Fallback def _create_vectorizer(self): """Create vectorizer instance based on configuration.""" kwargs = dict(self.config.vectorizer_kwargs) if self.config.vectorizer_name == "sklearn.feature_extraction.text.CountVectorizer": return CountVectorizer(**kwargs) elif self.config.vectorizer_name == "sklearn.feature_extraction.text.TfidfVectorizer": return TfidfVectorizer(**kwargs) elif self.config.vectorizer_name == "sentence-transformers": model_name = kwargs.pop("model_name", "all-MiniLM-L6-v2") return SentenceTransformerVectorizer(model_name=model_name) else: # Try to import dynamically try: module_name, class_name = self.config.vectorizer_name.rsplit('.', 1) module = __import__(module_name, fromlist=[class_name]) vectorizer_class = getattr(module, class_name) return vectorizer_class(**kwargs) except Exception as e: self.logger.error(f"Failed to create vectorizer {self.config.vectorizer_name}: {e}") return TfidfVectorizer() # Fallback def _reorder_instances(self, item_manager: ItemStateManager, schema_name: str): """Reorder instances based on the configured query strategy.""" if schema_name not in self._models: self.logger.warning(f"No trained model available for schema {schema_name}") return # Get unlabeled instances unlabeled_instances = [] unlabeled_texts = [] for instance_id in item_manager.get_instance_ids(): if not item_manager.get_annotators_for_item(instance_id): item = item_manager.get_item(instance_id) if item: unlabeled_instances.append(instance_id) unlabeled_texts.append(item.get_text()) if not unlabeled_texts: self.logger.info("No unlabeled instances to reorder") return # Limit number of instances to process if self.config.max_instances_to_reorder: limit = self.config.max_instances_to_reorder unlabeled_instances = unlabeled_instances[:limit] unlabeled_texts = unlabeled_texts[:limit] model = self._models[schema_name] annotated = self._annotated_texts.get(schema_name, []) # Get rankings from strategy if (self.config.query_strategy == "bald" and schema_name in self._bald_ensembles and isinstance(self._query_strategy, BaldStrategy)): vectorizer = self._vectorizers.get(schema_name) if vectorizer: rankings = self._query_strategy.rank_with_ensemble( unlabeled_texts, self._bald_ensembles[schema_name], vectorizer ) else: rankings = self._query_strategy.rank(unlabeled_texts, model, model, annotated) else: # Extract vectorizer and classifier from pipeline for strategy use vectorizer = self._vectorizers.get(schema_name) classifier = model if vectorizer: rankings = self._query_strategy.rank( unlabeled_texts, classifier, vectorizer, annotated ) else: # Fallback: use confidence scores directly instance_scores = self._calculate_confidence_scores( unlabeled_instances, item_manager, schema_name ) sorted_instances = sorted(instance_scores, key=lambda x: x[1]) self._apply_reordering(sorted_instances, item_manager) return # ICL ensemble blending (Phase 5B) if self.config.use_icl_ensemble: rankings = self._blend_icl_scores( rankings, unlabeled_texts, schema_name ) # Map rankings back to instance IDs sorted_instances = [ (unlabeled_instances[idx], score) for idx, score in rankings if idx < len(unlabeled_instances) ] # Apply reordering with random sampling self._apply_reordering(sorted_instances, item_manager) def _blend_icl_scores(self, rankings: List[Tuple[int, float]], texts: List[str], schema_name: str) -> List[Tuple[int, float]]: """Blend query strategy scores with ICL predictions.""" try: from potato.ai.icl_labeler import get_icl_labeler icl_labeler = get_icl_labeler() if icl_labeler is None or not icl_labeler.has_enough_examples(schema_name): return rankings # Determine interpolation weight based on annotation count params = self.config.icl_ensemble_params initial_w = params.get("initial_icl_weight", 0.7) final_w = params.get("final_icl_weight", 0.2) transition = params.get("transition_instances", 100) annotated_count = len(self._annotated_texts.get(schema_name, [])) progress = min(1.0, annotated_count / max(1, transition)) icl_weight = initial_w + (final_w - initial_w) * progress strategy_weight = 1.0 - icl_weight # Get ICL confidence for each text icl_scores = {} for idx, text in enumerate(texts): try: pred = icl_labeler.label_instance( instance_id=f"_al_blend_{idx}", schema_name=schema_name, instance_text=text, ) if pred: # Lower confidence = higher priority (more uncertain) icl_scores[idx] = 1.0 - pred.confidence_score else: icl_scores[idx] = 0.5 except Exception: icl_scores[idx] = 0.5 # Normalize strategy scores strategy_map = {idx: score for idx, score in rankings} s_vals = list(strategy_map.values()) s_min, s_max = min(s_vals), max(s_vals) s_rng = s_max - s_min if s_max > s_min else 1.0 # Normalize ICL scores i_vals = list(icl_scores.values()) i_min, i_max = min(i_vals), max(i_vals) i_rng = i_max - i_min if i_max > i_min else 1.0 blended = [] for idx, score in rankings: norm_s = (score - s_min) / s_rng norm_i = (icl_scores.get(idx, 0.5) - i_min) / i_rng combined = strategy_weight * norm_s + icl_weight * norm_i blended.append((idx, combined)) blended.sort(key=lambda x: x[1], reverse=True) return blended except ImportError: return rankings except Exception as e: self.logger.warning(f"ICL blending failed: {e}") return rankings def _cold_start_reorder(self, item_manager: ItemStateManager): """LLM-based cold-start instance selection (Phase 3A). Based on Bayer et al. (2024) ActiveLLM approach. Before enough annotations exist for classifier training, use LLM to estimate which instances are most informative by finding those where LLM confidence is moderate (on the decision boundary). """ try: from potato.ai.llm_active_learning import create_llm_active_learning llm = create_llm_active_learning(self.config.llm_config) # Sample candidate instances all_ids = list(item_manager.get_instance_ids()) unannotated = [ iid for iid in all_ids if not item_manager.get_annotators_for_item(iid) ] if not unannotated: return batch_size = min(self.config.cold_start_batch_size, len(unannotated)) candidates = random.sample(unannotated, batch_size) instances = [] for iid in candidates: item = item_manager.get_item(iid) if item: instances.append({"id": iid, "text": item.get_text()}) if not instances: return # Get LLM predictions schema_name = self.schema_cycler.get_current_schema() if self.schema_cycler else None predictions = llm.predict_instances( instances=instances, annotation_instructions="Rate your confidence in labeling this text.", schema_name=schema_name or "default", label_options=["positive", "negative", "neutral"], ) # Select instances with moderate confidence (decision boundary) moderate = [] other = [] for pred in predictions: if 0.4 <= pred.confidence_score <= 0.7: moderate.append((pred.instance_id, pred.confidence_score)) else: other.append((pred.instance_id, pred.confidence_score)) # Moderate-confidence first, then others, interleaved with random reordered = [iid for iid, _ in moderate] + [iid for iid, _ in other] # Add remaining unannotated instances not in the sample sampled_set = set(candidates) remaining = [iid for iid in unannotated if iid not in sampled_set] random.shuffle(remaining) reordered.extend(remaining) item_manager.reorder_instances(reordered) self.logger.info(f"Cold-start LLM reordering: {len(moderate)} moderate-confidence, " f"{len(other)} other, {len(remaining)} remaining") except Exception as e: self.logger.warning(f"Cold-start LLM reordering failed: {e}") def _route_annotation(self, instance_id: str, instance_text: str, schema_name: str) -> Dict[str, Any]: """Noise-aware annotation routing (Phase 5D). Based on Yuan et al. (2024) NoiseAL approach. Routes instances between LLM auto-labeling and human annotation based on LLM confidence levels. Returns: Dict with 'route' ('human'|'auto'), optional 'suggestion', and optional 'auto_label'. """ if not self.config.annotation_routing: return {"route": "human"} thresholds = self.config.routing_thresholds auto_min = thresholds.get("auto_label_min_confidence", 0.9) suggest_below = thresholds.get("show_suggestion_below", 0.5) try: from potato.ai.icl_labeler import get_icl_labeler icl_labeler = get_icl_labeler() if icl_labeler is None or not icl_labeler.has_enough_examples(schema_name): return {"route": "human"} prediction = icl_labeler.label_instance( instance_id=instance_id, schema_name=schema_name, instance_text=instance_text, ) if prediction is None: return {"route": "human"} confidence = prediction.confidence_score if confidence >= auto_min: # High confidence: auto-label with periodic verification should_verify = random.random() < self.config.verification_sample_rate return { "route": "auto", "auto_label": prediction.predicted_label, "confidence": confidence, "needs_verification": should_verify, } elif confidence < suggest_below: # Low confidence: route to human with LLM suggestion return { "route": "human", "suggestion": prediction.predicted_label, "confidence": confidence, } else: # Medium confidence: route to human (most informative) return {"route": "human"} except ImportError: return {"route": "human"} except Exception as e: self.logger.warning(f"Annotation routing failed for {instance_id}: {e}") return {"route": "human"} def _calculate_confidence_scores(self, instance_ids: List[str], item_manager: ItemStateManager, schema_name: str) -> List[Tuple[str, float]]: """Calculate confidence scores for instances.""" instance_scores = [] model = self._models[schema_name] for instance_id in instance_ids: item = item_manager.get_item(instance_id) if not item: continue text = item.get_text() try: # Get prediction probabilities probas = model.predict_proba([text])[0] confidence = np.max(probas) instance_scores.append((instance_id, confidence)) except Exception as e: self.logger.warning(f"Error predicting for instance {instance_id}: {e}") # Default to low confidence for failed predictions instance_scores.append((instance_id, 0.1)) return instance_scores def _apply_reordering(self, sorted_instances: List[Tuple[str, float]], item_manager: ItemStateManager): """Apply the new ordering to the item manager.""" # Extract instance IDs in new order new_order = [instance_id for instance_id, _ in sorted_instances] if not new_order: return # Apply random sampling random_count = int(len(new_order) * self.config.random_sample_percent) if random_count > 0 and random_count <= len(new_order): random_instances = random.sample(new_order, random_count) else: random_instances = [] # Interleave active learning and random instances final_order = [] al_idx = 0 rand_idx = 0 while al_idx < len(new_order) or rand_idx < len(random_instances): if al_idx < len(new_order): final_order.append(new_order[al_idx]) al_idx += 1 if rand_idx < len(random_instances): final_order.append(random_instances[rand_idx]) rand_idx += 1 # Update item manager ordering item_manager.reorder_instances(final_order) self.logger.info(f"Reordered {len(final_order)} instances") def check_and_trigger_training(self): """Check if training should be triggered and queue it if needed.""" if not self.config.enabled: self.logger.debug("Active learning is disabled") return with self._lock: # Count current annotations user_manager = get_user_state_manager() current_annotation_count = sum( len(user_state.get_all_annotations()) for user_state in user_manager.get_all_users() ) self.logger.debug(f"Current annotation count: {current_annotation_count}, last count: {self._last_annotation_count}, update_frequency: {self.config.update_frequency}") # Check if we should trigger training if (current_annotation_count - self._last_annotation_count) >= self.config.update_frequency: self._training_queue.put("train") self._last_annotation_count = current_annotation_count self.logger.info(f"Queued active learning training (annotations: {current_annotation_count})") else: self.logger.debug("Not enough new annotations to trigger training") def force_training(self): """Force immediate training (for testing purposes).""" if not self.config.enabled: self.logger.debug("Active learning is disabled") return self.logger.info("Forcing immediate active learning training") self._training_queue.put("train") def get_stats(self) -> Dict[str, Any]: """Get active learning statistics.""" with self._lock: stats = { "enabled": self.config.enabled, "training_count": self._training_count, "last_training_time": self._last_training_time, "models_trained": list(self._models.keys()), "current_schema": self.schema_cycler.get_current_schema() if self.schema_cycler else None, "schema_order": self.schema_cycler.get_schema_order() if self.schema_cycler else [], "database_enabled": self.config.database_enabled, "model_persistence_enabled": self.config.model_persistence_enabled, "llm_enabled": self.config.llm_enabled, "query_strategy": self.config.query_strategy, "calibrate_probabilities": self.config.calibrate_probabilities, "cold_start_strategy": self.config.cold_start_strategy, "use_icl_ensemble": self.config.use_icl_ensemble, "annotation_routing": self.config.annotation_routing, } # Add training metrics if available if self.database_manager: try: stats["training_history"] = [ asdict(metrics) for metrics in self.database_manager.get_training_history() ] except Exception as e: self.logger.warning(f"Failed to get training history: {e}") stats["training_history"] = [] return stats def shutdown(self): """Shutdown the active learning manager.""" self._stop_training.set() if self._training_thread and self._training_thread.is_alive(): self._training_queue.put(None) # Shutdown signal self._training_thread.join(timeout=5.0) self.logger.info("Active learning manager shutdown complete") # Global singleton instance ACTIVE_LEARNING_MANAGER = None def parse_active_learning_config(config_data: Dict[str, Any]) -> Optional[ActiveLearningConfig]: """Build an ``ActiveLearningConfig`` from a Potato project config dict. Returns None when active learning is not enabled. Maps the keys under the ``active_learning:`` section onto the dataclass fields (unknown keys are ignored), and defaults ``schema_names`` to the project's labelable annotation schemes when not given. """ al_dict = (config_data or {}).get("active_learning", {}) or {} if not al_dict.get("enabled"): return None valid_fields = {f.name for f in dataclasses.fields(ActiveLearningConfig)} kwargs = {k: v for k, v in al_dict.items() if k in valid_fields} # Honor the nested `active_learning.llm:` block (LLM cold-start / ICL). # The dataclass uses flat fields (llm_enabled / llm_config), so translate. llm_block = al_dict.get("llm") if isinstance(llm_block, dict): kwargs.setdefault("llm_enabled", bool(llm_block.get("enabled", False))) kwargs.setdefault("llm_config", llm_block) # YAML parses sequences as lists, but sklearn's vectorizers require a tuple # for ngram_range (e.g. (1, 2)). Coerce it so training doesn't fail. vec_params = kwargs.get("vectorizer_params") if isinstance(vec_params, dict) and isinstance(vec_params.get("ngram_range"), list): vec_params = dict(vec_params) vec_params["ngram_range"] = tuple(vec_params["ngram_range"]) kwargs["vectorizer_params"] = vec_params # resolution_strategy may arrive as a string; coerce to the enum. rs = kwargs.get("resolution_strategy") if isinstance(rs, str): try: kwargs["resolution_strategy"] = ResolutionStrategy(rs) except ValueError: kwargs.pop("resolution_strategy", None) # Default schema_names to the labelable schemes in the project. if not kwargs.get("schema_names"): schemes = config_data.get("annotation_schemes", []) or [] kwargs["schema_names"] = [ s.get("name") for s in schemes if s.get("name") and s.get("annotation_type") in ( "radio", "multiselect", "likert", "select" ) ] return ActiveLearningConfig(**kwargs) def init_active_learning_manager(config: ActiveLearningConfig) -> ActiveLearningManager: """Initialize the global active learning manager.""" global ACTIVE_LEARNING_MANAGER if ACTIVE_LEARNING_MANAGER is None: ACTIVE_LEARNING_MANAGER = ActiveLearningManager(config) return ACTIVE_LEARNING_MANAGER def get_active_learning_manager() -> Optional[ActiveLearningManager]: """Get the global active learning manager.""" return ACTIVE_LEARNING_MANAGER def clear_active_learning_manager(): """Clear the global active learning manager (for testing).""" global ACTIVE_LEARNING_MANAGER if ACTIVE_LEARNING_MANAGER: ACTIVE_LEARNING_MANAGER.shutdown() ACTIVE_LEARNING_MANAGER = None