Commit History

Drop the top-level copies; they live in cell_fm/apps/condenseq now
b52b2a8
Running
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BoHuangLab commited on

Import the CondenSeq app modules from cell_fm.apps.condenseq; add vit_cls
a46a831
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Lead the noise section with pairing; a paired single-residue change is resolvable
0f4badf
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Correct the reference values (they were unseeded) and state the seed noise; document the numpy<2 constraint
9992a87
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Use the supplied flow diagram artwork; drop the generated figure
2a0a28d
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Diagram: ViT label, larger in-box type, AUC/AAC anchored in their regions
2b3e69d
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Trim the section text to one line; let the flow diagram carry the explanation
0167225
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Replace the explainer with a pipeline flow diagram
48261ce
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Add a schematic explaining the pipeline and what AUC and AAC measure
3642b56
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Label the input 'IDP sequence'
e3b797d
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Drop the preset dropdown; label the box IDP sequence (66 aa)
9494da9
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Sequence is the only input, fixed at 66 aa; sampling settings pinned
09d5e2c
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Say Intrinsically Disordered Peptide (IDP) rather than region/IDR
d6e8796
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Reword the model description
7bc588d
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Rename to CELL-FM; make Condensate Titration the first of several app sections
6ef271b
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Add MIT license
75c241d
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Fix 500 on /gradio_api/info: handle bool additionalProperties schemas
485fb8a
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Let Spaces install gradio from sdk_version (5.9.1); fixes 500 on /
060ee97
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Do not pass share= on Spaces; it aborts launch when localhost is unreachable
5e7868c
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BoHuangLab commited on

Pin gradio/gradio_client together to fix the startup schema crash
5827da8
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Add loguru/tqdm/torchdiffeq; make wandb optional
6e7dc7d
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Pin torch 2.8.0 for ZeroGPU; build models on CPU at startup
7fb4074
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CELL-FM CondenSeq demo: sequence -> titration curve, AUC and AAC
e794567
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BoHuangLab commited on

initial commit
1b8a37e
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BoHuangLab commited on