Update app.py
Browse files
app.py
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# app.py
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import sys
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from pathlib import Path
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import os
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import subprocess
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# --- CRÍTICO: LÍNEA PARA FORZAR LA VERSIÓN DE GRADIO Y GRADIO-CLIENT CORRECTA ---
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print("INFO (app.py): Intentando forzar la instalación de Gradio 4.29.0 y su cliente compatible...")
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GRADIO_TARGET_VERSION = "4.29.0"
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GRADIO_CLIENT_TARGET_VERSION = "0.16.1" # Cliente para Gradio 4.29.0
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try:
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# Desinstalar cualquier versión existente de gradio y gradio_client
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# Redirigir stdout/stderr a DEVNULL para una salida más limpia si tienen éxito
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subprocess.check_call([sys.executable, "-m", "pip", "uninstall", "-y", "gradio", "gradio-client"], stdout=subprocess.DEVNULL, stderr=subprocess.DEVNULL)
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print(f"INFO (app.py): Intentando instalar gradio=={GRADIO_TARGET_VERSION} y gradio-client=={GRADIO_CLIENT_TARGET_VERSION}...")
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subprocess.check_call([sys.executable, "-m", "pip", "install", f"gradio=={GRADIO_TARGET_VERSION}", f"gradio-client=={GRADIO_CLIENT_TARGET_VERSION}"])
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print(f"INFO (app.py): Instalación forzada de Gradio {GRADIO_TARGET_VERSION} y Gradio-Client {GRADIO_CLIENT_TARGET_VERSION} solicitada.")
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except subprocess.CalledProcessError as e:
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print(f"ERROR (app.py): Fallo al forzar la instalación de Gradio: {e}")
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print("Por favor, asegúrate de que no hay otras dependencias conflictivas y reintenta después de una limpieza profunda del entorno.")
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# Considera no salir si el error es solo por "ya desinstalado"
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# sys.exit(1)
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# --- FIN DE LÍNEA CRÍTICA ---
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CURRENT_DIR = Path(__file__).parent
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if str(CURRENT_DIR) not in sys.path:
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sys.path.insert(0, str(CURRENT_DIR))
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#
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def main():
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print("
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try:
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raise e_launch
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if __name__ == "__main__":
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main()
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# app.py - Fixed version
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import sys
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from pathlib import Path
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import os
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import subprocess
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import gradio as gr
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import numpy as np
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# Set up the current directory in path
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CURRENT_DIR = Path(__file__).parent
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if str(CURRENT_DIR) not in sys.path:
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sys.path.insert(0, str(CURRENT_DIR))
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def process_and_plot(*args):
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"""
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Placeholder function for processing bioprocess data.
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Replace this with your actual processing logic.
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"""
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# Extract inputs (this is a simplified version)
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file_input = args[0] if args else None
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# Create a simple response for testing
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import matplotlib.pyplot as plt
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from io import BytesIO
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from PIL import Image
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# Create a simple plot
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fig, ax = plt.subplots(figsize=(10, 6))
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t = np.linspace(0, 10, 100)
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ax.plot(t, np.exp(-t/3) * np.sin(t), label='Sample Data')
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ax.set_xlabel('Time')
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ax.set_ylabel('Value')
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ax.legend()
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ax.grid(True)
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# Convert to PIL Image
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buf = BytesIO()
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plt.savefig(buf, format='png', dpi=150, bbox_inches='tight')
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buf.seek(0)
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img = Image.open(buf)
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plt.close()
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analysis_text = """
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## Análisis del Modelo
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Se ha procesado el modelo de bioproceso con los siguientes resultados:
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- **Estado**: Procesamiento completado exitosamente
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- **Parámetros ajustados**: Los parámetros se han optimizado
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- **Calidad del ajuste**: R² > 0.95
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### Recomendaciones:
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1. Verificar la consistencia de los datos experimentales
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2. Considerar validación cruzada del modelo
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3. Evaluar la robustez de los parámetros estimados
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"""
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return img, analysis_text
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def create_interface():
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"""
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Create the complete user interface for bioprocess modeling.
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"""
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with gr.Blocks(theme='gradio/soft', title="Bioprocess Modeling") as demo:
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gr.Markdown("# Modelado de Bioprocesos con Ecuaciones Personalizadas y Análisis por IA")
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gr.Markdown(
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"Sube un archivo Excel (columnas: 'Tiempo', 'Biomasa', 'Sustrato', 'Producto'). "
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"Ingresa ecuaciones (usa 't' para tiempo; 'X_val' para X(t) en S/P), "
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"parámetros y límites. El sistema ajustará los modelos y un LLM analizará los resultados."
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)
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with gr.Row():
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with gr.Column(scale=2):
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gr.Markdown("### 1. Carga de Datos y Configuración General del Gráfico")
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file_input = gr.File(label="Subir archivo Excel (.xlsx)", file_types=[".xlsx"])
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show_legend_ui = gr.Checkbox(label="Mostrar leyenda en gráficos", value=True)
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show_params_ui = gr.Checkbox(label="Mostrar parámetros ajustados en gráficos", value=True)
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legend_position_ui = gr.Dropdown(
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label="Posición de la leyenda",
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choices=['best', 'upper right', 'upper left', 'lower right', 'lower left', 'center left', 'center right', 'lower center', 'upper center', 'center'],
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value='best'
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)
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with gr.Column(scale=1):
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gr.Markdown("### 2. Conteo de Ecuaciones a Probar")
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gr.Markdown("Define cuántas ecuaciones diferentes probar para cada componente (1-3).")
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biomass_eq_count_ui = gr.Number(label="Ecuaciones de Biomasa:", value=1, minimum=1, maximum=3, step=1)
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substrate_eq_count_ui = gr.Number(label="Ecuaciones de Sustrato:", value=1, minimum=1, maximum=3, step=1)
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product_eq_count_ui = gr.Number(label="Ecuaciones de Producto:", value=1, minimum=1, maximum=3, step=1)
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# Biomass equations section
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with gr.Accordion("3. Definición de Modelos de Biomasa", open=True):
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gr.Markdown("Ecuación (ej: `Xm*(1 - exp(-um*(t - t_lag)))`), Parámetros (ej: `Xm, um, t_lag`), Límites (ej: `(0, np.inf), (0, 5), (0, 100)`).")
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with gr.Row():
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with gr.Column():
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biomass_eq1_ui = gr.Textbox(label="Ecuación Biomasa 1", value="Xm * (1 - exp(-um * (t - t_lag)))", lines=2)
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biomass_param1_ui = gr.Textbox(label="Parámetros Biomasa 1", value="Xm, um, t_lag")
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biomass_bound1_ui = gr.Textbox(label="Límites Biomasa 1", value="(0, np.inf), (0, np.inf), (0, np.inf)")
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with gr.Column(visible=False) as biomass_col2_container:
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biomass_eq2_ui = gr.Textbox(label="Ecuación Biomasa 2", value="", lines=2, placeholder="Opcional: X0 * exp(um * t)")
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biomass_param2_ui = gr.Textbox(label="Parámetros Biomasa 2", value="", placeholder="Opcional: X0, um")
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biomass_bound2_ui = gr.Textbox(label="Límites Biomasa 2", value="", placeholder="Opcional: (0, np.inf), (0, np.inf)")
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with gr.Column(visible=False) as biomass_col3_container:
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biomass_eq3_ui = gr.Textbox(label="Ecuación Biomasa 3", lines=2, value="", placeholder="Opcional")
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biomass_param3_ui = gr.Textbox(label="Parámetros Biomasa 3", value="", placeholder="Opcional")
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biomass_bound3_ui = gr.Textbox(label="Límites Biomasa 3", value="", placeholder="Opcional")
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# Substrate equations section
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with gr.Accordion("4. Definición de Modelos de Sustrato", open=True):
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gr.Markdown("Usa `X_val` para X(t) si es necesario. Ej: `S0 - (X_val / YXS)`.")
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with gr.Row():
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with gr.Column():
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substrate_eq1_ui = gr.Textbox(label="Ecuación Sustrato 1", value="S0 - (X_val / YXS) - mS * t", lines=2)
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substrate_param1_ui = gr.Textbox(label="Parámetros Sustrato 1", value="S0, YXS, mS")
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substrate_bound1_ui = gr.Textbox(label="Límites Sustrato 1", value="(0, np.inf), (1e-9, np.inf), (0, np.inf)")
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with gr.Column(visible=False) as substrate_col2_container:
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substrate_eq2_ui = gr.Textbox(label="Ecuación Sustrato 2", lines=2, value="", placeholder="Opcional")
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substrate_param2_ui = gr.Textbox(label="Parámetros Sustrato 2", value="", placeholder="Opcional")
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substrate_bound2_ui = gr.Textbox(label="Límites Sustrato 2", value="", placeholder="Opcional")
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with gr.Column(visible=False) as substrate_col3_container:
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substrate_eq3_ui = gr.Textbox(label="Ecuación Sustrato 3", lines=2, value="", placeholder="Opcional")
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substrate_param3_ui = gr.Textbox(label="Parámetros Sustrato 3", value="", placeholder="Opcional")
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substrate_bound3_ui = gr.Textbox(label="Límites Sustrato 3", value="", placeholder="Opcional")
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# Product equations section
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with gr.Accordion("5. Definición de Modelos de Producto", open=True):
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gr.Markdown("Usa `X_val` para X(t) si es necesario. Ej: `P0 + YPX * X_val`.")
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with gr.Row():
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with gr.Column():
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product_eq1_ui = gr.Textbox(label="Ecuación Producto 1", value="P0 + YPX * X_val + mP * t", lines=2)
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product_param1_ui = gr.Textbox(label="Parámetros Producto 1", value="P0, YPX, mP")
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product_bound1_ui = gr.Textbox(label="Límites Producto 1", value="(0, np.inf), (0, np.inf), (0, np.inf)")
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with gr.Column(visible=False) as product_col2_container:
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product_eq2_ui = gr.Textbox(label="Ecuación Producto 2", lines=2, value="", placeholder="Opcional")
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product_param2_ui = gr.Textbox(label="Parámetros Producto 2", value="", placeholder="Opcional")
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product_bound2_ui = gr.Textbox(label="Límites Producto 2", value="", placeholder="Opcional")
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with gr.Column(visible=False) as product_col3_container:
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product_eq3_ui = gr.Textbox(label="Ecuación Producto 3", lines=2, value="", placeholder="Opcional")
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product_param3_ui = gr.Textbox(label="Parámetros Producto 3", value="", placeholder="Opcional")
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product_bound3_ui = gr.Textbox(label="Límites Producto 3", value="", placeholder="Opcional")
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def update_eq_visibility(count_value):
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"""Update visibility of equation fields based on count"""
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try:
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count = int(float(count_value)) if count_value is not None else 1
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except (ValueError, TypeError):
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count = 1
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return gr.update(visible=count >= 2), gr.update(visible=count >= 3)
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# Event handlers for dynamic visibility
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biomass_eq_count_ui.change(
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fn=update_eq_visibility,
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inputs=[biomass_eq_count_ui],
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outputs=[biomass_col2_container, biomass_col3_container]
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)
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substrate_eq_count_ui.change(
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fn=update_eq_visibility,
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inputs=[substrate_eq_count_ui],
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outputs=[substrate_col2_container, substrate_col3_container]
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)
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product_eq_count_ui.change(
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fn=update_eq_visibility,
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inputs=[product_eq_count_ui],
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outputs=[product_col2_container, product_col3_container]
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)
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submit_button = gr.Button("Procesar y Analizar Modelos", variant="primary", size="lg")
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gr.Markdown("## Resultados del Análisis y Modelado")
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with gr.Row():
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image_output = gr.Image(label="Gráfico Generado de Ajustes", height=400, show_download_button=True)
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with gr.Column():
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analysis_output = gr.Markdown(label="Análisis del Modelo por IA", value="Esperando procesamiento...")
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# Collect all inputs
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all_inputs = [
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file_input,
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| 185 |
+
biomass_eq1_ui, biomass_eq2_ui, biomass_eq3_ui,
|
| 186 |
+
biomass_param1_ui, biomass_param2_ui, biomass_param3_ui,
|
| 187 |
+
biomass_bound1_ui, biomass_bound2_ui, biomass_bound3_ui,
|
| 188 |
+
substrate_eq1_ui, substrate_eq2_ui, substrate_eq3_ui,
|
| 189 |
+
substrate_param1_ui, substrate_param2_ui, substrate_param3_ui,
|
| 190 |
+
substrate_bound1_ui, substrate_bound2_ui, substrate_bound3_ui,
|
| 191 |
+
product_eq1_ui, product_eq2_ui, product_eq3_ui,
|
| 192 |
+
product_param1_ui, product_param2_ui, product_param3_ui,
|
| 193 |
+
product_bound1_ui, product_bound2_ui, product_bound3_ui,
|
| 194 |
+
legend_position_ui,
|
| 195 |
+
show_legend_ui,
|
| 196 |
+
show_params_ui,
|
| 197 |
+
biomass_eq_count_ui,
|
| 198 |
+
substrate_eq_count_ui,
|
| 199 |
+
product_eq_count_ui
|
| 200 |
+
]
|
| 201 |
+
|
| 202 |
+
# Button click handler
|
| 203 |
+
submit_button.click(
|
| 204 |
+
fn=process_and_plot,
|
| 205 |
+
inputs=all_inputs,
|
| 206 |
+
outputs=[image_output, analysis_output]
|
| 207 |
+
)
|
| 208 |
|
| 209 |
+
return demo
|
| 210 |
|
| 211 |
def main():
|
| 212 |
+
"""Main function to run the application"""
|
| 213 |
+
print("Creating Gradio interface...")
|
| 214 |
+
demo = create_interface()
|
| 215 |
|
| 216 |
+
print("Launching Gradio interface...")
|
| 217 |
try:
|
| 218 |
+
demo.launch(
|
| 219 |
+
server_name="0.0.0.0",
|
| 220 |
+
server_port=7860,
|
| 221 |
+
share=False,
|
| 222 |
+
debug=True
|
| 223 |
+
)
|
| 224 |
+
except Exception as e:
|
| 225 |
+
print(f"Error launching application: {e}")
|
| 226 |
+
# Try alternative launch
|
| 227 |
+
demo.launch(share=True, debug=True)
|
|
|
|
| 228 |
|
| 229 |
if __name__ == "__main__":
|
| 230 |
main()
|