CardioTrackTest / dvc.yaml
Martinacap02's picture
Init deploy branch for HF Space
f7d11f7
stages:
download_data:
cmd: uv run predicting_outcomes_in_heart_failure/data/dataset.py
deps:
- predicting_outcomes_in_heart_failure/data/dataset.py
outs:
- data/raw/heart.csv
preprocessing:
cmd: uv run predicting_outcomes_in_heart_failure/data/preprocess.py
deps:
- predicting_outcomes_in_heart_failure/data/preprocess.py
- data/raw/heart.csv
outs:
- data/interim/preprocessed.csv
- data/interim/preprocessed_female_only.csv
- data/interim/preprocessed_male_only.csv
- data/interim/preprocessed_no_sex_column.csv
- data/interim/preprocess_artifacts/scaler.joblib
split_data:
foreach: [all, female, male, nosex]
do:
cmd: >
uv run predicting_outcomes_in_heart_failure/data/split_data.py
--variant ${item}
deps:
- predicting_outcomes_in_heart_failure/data/split_data.py
- data/interim/preprocessed.csv
- data/interim/preprocessed_female_only.csv
- data/interim/preprocessed_male_only.csv
- data/interim/preprocessed_no_sex_column.csv
outs:
- data/processed/${item}
training:
foreach:
- { variant: all, model: logreg }
- { variant: all, model: random_forest }
- { variant: all, model: decision_tree }
- { variant: female, model: logreg }
- { variant: female, model: random_forest }
- { variant: female, model: decision_tree }
- { variant: male, model: logreg }
- { variant: male, model: random_forest }
- { variant: male, model: decision_tree }
- { variant: nosex, model: logreg }
- { variant: nosex, model: random_forest }
- { variant: nosex, model: decision_tree }
do:
cmd: >
uv run predicting_outcomes_in_heart_failure/modeling/train.py
--variant ${item.variant}
--model ${item.model}
deps:
- predicting_outcomes_in_heart_failure/modeling/train.py
- data/processed/${item.variant}/train.csv
outs:
- models/${item.variant}/${item.model}.joblib
- reports/${item.variant}/${item.model}
evaluation:
foreach:
- { variant: all, model: logreg }
- { variant: all, model: random_forest }
- { variant: all, model: decision_tree }
- { variant: female, model: logreg }
- { variant: female, model: random_forest }
- { variant: female, model: decision_tree }
- { variant: male, model: logreg }
- { variant: male, model: random_forest }
- { variant: male, model: decision_tree }
- { variant: nosex, model: logreg }
- { variant: nosex, model: random_forest }
- { variant: nosex, model: decision_tree }
do:
cmd: >
uv run predicting_outcomes_in_heart_failure/modeling/evaluate.py
--variant ${item.variant}
--model ${item.model}
deps:
- predicting_outcomes_in_heart_failure/modeling/evaluate.py
- models/${item.variant}/${item.model}.joblib
- data/processed/${item.variant}/test.csv
outs:
- metrics/test/${item.variant}/${item.model}.json