Yash goyal commited on
Update app.py
Browse files
app.py
CHANGED
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@@ -1,6 +1,6 @@
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import os
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os.environ['MPLCONFIGDIR'] = '/tmp/matplotlib'
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from flask import Flask, render_template, request, redirect, url_for, session, send_file
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from flask_sqlalchemy import SQLAlchemy
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from flask_migrate import Migrate
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import tensorflow as tf
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@@ -16,7 +16,6 @@ from reportlab.lib.units import inch
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from datetime import datetime
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import logging
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from flask_mail import Mail, Message
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from flask import jsonify, url_for
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app = Flask(__name__)
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app.secret_key = "e3f6f40bb8b2471b9f07c4025d845be9"
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@@ -40,101 +39,59 @@ MODEL_PATH = "skin_lesion_model.h5"
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HISTORY_PATH = "training_history.pkl"
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PLOT_PATH = "/tmp/static/training_plot.png"
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LOGO_PATH = "static/logo.jpg"
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FORM_TEMPLATE = "form.html"
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IMG_SIZE = (224, 224)
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CONFIDENCE_THRESHOLD = 0.30
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label_map = {
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0: "Melanoma",
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3: "Actinic keratosis",
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4: "Benign keratosis",
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5: "Dermatofibroma",
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6: "Vascular lesion",
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7: "Squamous cell carcinoma"
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}
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recommendations = {
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"Melanoma": {
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"solutions": [
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"Consult a dermatologist immediately.",
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"Surgical removal is typically required.",
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"Regular follow-up and screening for metastasis."
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],
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"medications": ["Interferon alfa-2b", "Vemurafenib", "Dacarbazine"]
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},
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"Melanocytic nevus": {
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"solutions": [
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"Usually benign and requires no treatment.",
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"Monitor for any change in shape or color."
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],
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"medications": ["No medication necessary unless changes occur."]
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},
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"Basal cell carcinoma": {
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"solutions": [
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"Surgical excision or Mohs surgery.",
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"Topical treatments if superficial.",
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"Radiation in select cases."
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],
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"medications": ["Imiquimod cream", "Fluorouracil cream", "Vismodegib"]
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},
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"Actinic keratosis": {
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"solutions": [
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"Cryotherapy or topical treatments.",
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"Avoid prolonged sun exposure.",
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"Use of sunscreen regularly."
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],
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"medications": ["Fluorouracil", "Imiquimod", "Diclofenac gel"]
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},
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"Benign keratosis": {
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"solutions": [
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"Generally harmless and often left untreated.",
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"Can be removed for cosmetic reasons."
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],
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"medications": ["No medication required unless infected."]
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},
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"Dermatofibroma": {
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"solutions": [
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"Benign skin growth, no treatment needed.",
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"Surgical removal if painful or for cosmetic reasons."
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],
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"medications": ["No medication needed."]
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},
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"Vascular lesion": {
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"solutions": [
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"Treatment depends on type (e.g., hemangioma).",
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"Laser therapy is commonly used.",
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"Observation if no complications."
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],
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"medications": ["Beta-blockers (e.g., propranolol for hemangioma)"]
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},
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"Squamous cell carcinoma": {
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"solutions": [
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"Surgical removal is standard.",
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"Follow-up for recurrence or metastasis.",
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"Avoid sun exposure and use sunscreen."
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],
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"medications": ["Fluorouracil", "Cisplatin", "Imiquimod"]
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},
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"Low confidence": {
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"solutions": [
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"The image is not confidently classified.",
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"Please upload a clearer image or consult a doctor."
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],
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"medications": ["Not available due to low confidence."]
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},
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"Unknown": {
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"solutions": ["No specific guidance available."],
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"medications": ["N/A"]
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}
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}
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# Logger
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logging.basicConfig(level=logging.INFO, format='%(asctime)s - %(levelname)s - %(message)s')
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logger = logging.getLogger(__name__)
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# Database Models
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class User(db.Model):
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id = db.Column(db.Integer, primary_key=True)
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name = db.Column(db.String(100), nullable=False)
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@@ -152,33 +109,30 @@ class Scan(db.Model):
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timestamp = db.Column(db.DateTime, default=datetime.utcnow)
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image_filename = db.Column(db.String(100), nullable=False)
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# Load Model
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model = None
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model_load_error = None
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def load_model():
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global model, model_load_error
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try:
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if os.path.exists(MODEL_PATH):
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logger.info("Loading model from %s", MODEL_PATH)
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model = tf.keras.models.load_model(MODEL_PATH, compile=False)
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logger.info("Model loaded successfully")
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else:
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logger.error("Model file %s not found", MODEL_PATH)
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model_load_error = f"Model file {MODEL_PATH} not found"
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except Exception as e:
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# Attempt to load model at startup
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load_model()
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# Plot training history
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if os.path.exists(HISTORY_PATH):
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try:
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with open(HISTORY_PATH, "rb") as f:
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history_dict = pickle.load(f)
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if "accuracy" in history_dict and "val_accuracy" in history_dict:
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os.makedirs("/tmp/static", exist_ok=True)
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plt.plot(history_dict['accuracy'], label='Train Accuracy')
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plt.plot(history_dict['val_accuracy'], label='Val Accuracy')
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plt.xlabel('Epochs')
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@@ -188,380 +142,249 @@ if os.path.exists(HISTORY_PATH):
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plt.grid(True)
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plt.savefig(PLOT_PATH)
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plt.close()
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logger.info("Training plot saved at %s", PLOT_PATH)
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else:
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logger.warning("Invalid training history data in %s", HISTORY_PATH)
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except Exception as e:
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logger.warning("Training history load error:
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else:
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logger.warning("Training history file %s not found", HISTORY_PATH)
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def preprocess_image(image_bytes):
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return np.expand_dims(image_array, axis=0) / 255.0
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except Exception as e:
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logger.error("Image preprocessing error: %s", str(e))
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raise
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def generate_pdf(report, filepath):
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except Exception as e:
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logger.warning("Logo error: %s", str(e))
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# Professional title
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c.setFont("Helvetica-Bold", 22)
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c.setFillColor(colors.Color(0.2, 0.2, 0.2, alpha=1))
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c.drawCentredString(width / 2, y + 5, "Medical Diagnosis Report")
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# Subtitle
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c.setFont("Helvetica", 11)
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c.setFillColor(colors.Color(0.5, 0.5, 0.5, alpha=1))
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c.drawCentredString(width / 2, y - 15, "Dermatological Analysis")
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# Professional line
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c.setStrokeColor(colors.Color(0.8, 0.8, 0.8, alpha=1))
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c.setLineWidth(1)
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c.line(80, y - 35, width - 80, y - 35)
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y -= 80
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def professional_section_box(title, fields, extra_gap=20):
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nonlocal y
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box_height = len(fields) * 20 + 40
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c.setFillColor(colors.Color(0.96, 0.96, 0.96, alpha=0.3))
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c.rect(42, y - box_height - 2, width - 84, box_height, fill=1, stroke=0)
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c.setFillColor(colors.white)
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c.rect(40, y - box_height, width - 80, box_height, fill=1, stroke=1)
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c.setStrokeColor(colors.Color(0.9, 0.9, 0.9, alpha=1))
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c.setFillColor(colors.Color(0.95, 0.95, 0.95, alpha=1))
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c.rect(40, y - 30, width - 80, 30, fill=1, stroke=0)
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c.setFont("Helvetica-Bold", 12)
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c.setFillColor(colors.Color(0.3, 0.3, 0.3, alpha=1))
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c.drawString(55, y - 20, title)
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y -= 45
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c.setFont("Helvetica", 10)
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c.setFillColor(colors.Color(0.2, 0.2, 0.2, alpha=1))
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for label, val in fields.items():
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c.setFont("Helvetica-Bold", 9)
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c.setFillColor(colors.Color(0.4, 0.4, 0.4, alpha=1))
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c.drawString(55, y, f"{label}:")
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c.setFont("Helvetica", 9)
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c.setFillColor(colors.Color(0.2, 0.2, 0.2, alpha=1))
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c.drawString(150, y, str(val))
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y -= 20
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y -= extra_gap
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professional_section_box("Patient Information", {
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"Name": report["name"],
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"Email": report["email"],
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"Gender": report["gender"],
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"Age": f"{report['age']} years"
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})
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confidence_val = float(report["confidence"].replace('%', ''))
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confidence_text = f"{report['confidence']} ({'High' if confidence_val > 85 else 'Moderate' if confidence_val > 70 else 'Low'} Confidence)"
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professional_section_box("Diagnostic Results", {
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"Condition": report["prediction"],
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"Confidence": confidence_text,
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"Notes": report["message"] if report["message"] else "No additional notes"
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})
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disease = report["prediction"]
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treatment = recommendations.get(disease, recommendations["Unknown"])
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professional_section_box("Treatment Recommendations", {
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f"{i+1}. {line}": "" for i, line in enumerate(treatment["solutions"])
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})
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professional_section_box("Medication Guidelines", {
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f"{i+1}. {line}": "" for i, line in enumerate(treatment["medications"])
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})
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c.setFillColor(colors.Color(0.98, 0.98, 0.98, alpha=1))
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c.rect(40, 40, width - 80, 70, fill=1, stroke=1)
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c.setStrokeColor(colors.Color(0.9, 0.9, 0.9, alpha=1))
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c.
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c.
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c.
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c.setFont("Helvetica", 8)
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c.setFillColor(colors.Color(0.3, 0.3, 0.3, alpha=1))
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c.
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@app.route("/")
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def home():
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return redirect(url_for("form"))
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except Exception as e:
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logger.error("Error in home route: %s", str(e))
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return render_template(FORM_TEMPLATE, history_plot=None, result={
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"prediction": "Error",
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"confidence": "N/A",
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"message": f"Failed to load page: {str(e)}",
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"email_status": "N/A"
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})
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@app.route("/form")
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def form():
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if model_load_error:
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return render_template(FORM_TEMPLATE, history_plot="/training_plot.png", result={
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"prediction": "Error",
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"confidence": "N/A",
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"message": f"Model loading failed: {model_load_error}",
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"email_status": "N/A"
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})
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return render_template(FORM_TEMPLATE, history_plot="/training_plot.png")
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except Exception as e:
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logger.error("Error rendering form: %s", str(e))
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return render_template(FORM_TEMPLATE, history_plot=None, result={
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"prediction": "Error",
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"confidence": "N/A",
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"message": f"Failed to load form: {str(e)}",
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"email_status": "N/A"
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}, status=500)
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@app.route("/training_plot.png")
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def training_plot():
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if os.path.exists(PLOT_PATH):
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return send_file(PLOT_PATH, mimetype="image/png")
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else:
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logger.warning("Training plot %s not found", PLOT_PATH)
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return "", 404
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except Exception as e:
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logger.error("Error serving training plot: %s", str(e))
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return "", 500
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@app.route("/api/history")
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def api_history():
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try:
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user_email = request.args.get('email')
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if not user_email:
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return jsonify({"error": "Email parameter is required"}), 400
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user = User.query.filter_by(email=user_email).first()
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if not user:
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return jsonify([])
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scans = Scan.query.filter_by(user_id=user.id).order_by(Scan.timestamp.desc()).all()
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history_data = [{
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"id": scan.id,
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"prediction": scan.prediction,
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"confidence": scan.confidence,
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"timestamp": scan.timestamp.strftime("%B %d, %Y at %I:%M %p"),
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"patient_name": scan.patient_name,
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"image_url": url_for('uploaded_file', filename=scan.image_filename, _external=True)
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} for scan in scans]
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return jsonify(history_data)
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except Exception as e:
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logger.error("Error in history API: %s", str(e))
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return jsonify({"error": "Internal server error"}), 500
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@app.route("/
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def
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scan = Scan.query.get(scan_id)
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if not scan:
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return jsonify({"error": "Report not found"}), 404
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report_data = {
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"name": scan.user.name,
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"email": scan.user.email,
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"gender": scan.patient_gender,
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"age": scan.patient_age,
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"prediction": scan.prediction,
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"confidence": scan.confidence,
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"message": ""
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}
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pdf_path = f"/tmp/report_{scan_id}.pdf"
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generate_pdf(report_data, pdf_path)
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msg = Message(
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'Your SnapSkin Diagnostic Report',
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sender=app.config['MAIL_USERNAME'],
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recipients=[scan.user.email]
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)
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msg.body = f"Dear {scan.user.name},\n\nPlease find your requested diagnostic report attached.\n\nThank you for using SnapSkin."
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with app.open_resource(pdf_path) as fp:
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msg.attach(f"SnapSkin_Report_{scan_id}.pdf", "application/pdf", fp.read())
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mail.send(msg)
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os.remove(pdf_path)
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| 428 |
-
return jsonify({"success": True, "message": f"Report sent to {scan.user.email}"})
|
| 429 |
-
except Exception as e:
|
| 430 |
-
logger.error(f"Failed to send email for scan {scan_id}: {e}")
|
| 431 |
-
return jsonify({"success": False, "message": "Failed to send email."}), 500
|
| 432 |
|
| 433 |
@app.route("/predict", methods=["POST"])
|
| 434 |
def predict():
|
| 435 |
try:
|
| 436 |
if model_load_error or not model:
|
| 437 |
raise ValueError(f"Model not loaded: {model_load_error}")
|
| 438 |
-
if "image" not in request.files:
|
| 439 |
raise ValueError("No image uploaded.")
|
| 440 |
-
|
| 441 |
-
|
|
|
|
|
|
|
|
|
|
| 442 |
img_array = preprocess_image(image_bytes)
|
| 443 |
prediction = model.predict(img_array)[0]
|
| 444 |
predicted_index = int(np.argmax(prediction))
|
| 445 |
confidence = float(prediction[predicted_index])
|
| 446 |
label = label_map.get(predicted_index, "Unknown") if confidence >= CONFIDENCE_THRESHOLD else "Low confidence"
|
| 447 |
-
msg = "
|
|
|
|
|
|
|
| 448 |
email = request.form.get("email")
|
| 449 |
user = User.query.filter_by(email=email).first()
|
| 450 |
if not user:
|
| 451 |
user = User(name=request.form.get("name"), email=email)
|
| 452 |
db.session.add(user)
|
| 453 |
db.session.commit()
|
|
|
|
| 454 |
timestamp = datetime.now().strftime("%Y%m%d%H%M%S")
|
| 455 |
-
image_filename = f"scan_{timestamp}.jpg"
|
| 456 |
image_path = os.path.join("static/uploads", image_filename)
|
| 457 |
os.makedirs("static/uploads", exist_ok=True)
|
| 458 |
-
|
| 459 |
-
|
|
|
|
| 460 |
scan = Scan(
|
| 461 |
-
user_id=user.id,
|
| 462 |
-
|
| 463 |
-
|
| 464 |
-
patient_age=int(request.form.get("age")),
|
| 465 |
-
prediction=label,
|
| 466 |
-
confidence=f"{confidence * 100:.2f}%",
|
| 467 |
-
image_filename=image_filename
|
| 468 |
)
|
| 469 |
db.session.add(scan)
|
| 470 |
db.session.commit()
|
|
|
|
|
|
|
| 471 |
report = {
|
| 472 |
-
"name": request.form.get("name"),
|
| 473 |
-
"
|
| 474 |
-
"
|
| 475 |
-
"age": request.form.get("age"),
|
| 476 |
-
"prediction": label,
|
| 477 |
-
"confidence": f"{confidence * 100:.2f}%",
|
| 478 |
-
"message": msg,
|
| 479 |
-
"scan_id": scan.id
|
| 480 |
}
|
| 481 |
-
|
|
|
|
| 482 |
try:
|
| 483 |
if not app.config['MAIL_USERNAME'] or not app.config['MAIL_PASSWORD']:
|
| 484 |
-
raise ValueError("Mail
|
|
|
|
| 485 |
pdf_path = f"/tmp/report_{scan.id}.pdf"
|
| 486 |
generate_pdf(report, pdf_path)
|
| 487 |
-
|
| 488 |
-
|
| 489 |
-
|
| 490 |
-
recipients=[email]
|
| 491 |
-
)
|
| 492 |
-
msg.body = f"Dear {report['name']},\n\nPlease find your diagnostic report attached.\n\nThank you for using SnapSkin."
|
| 493 |
with app.open_resource(pdf_path) as fp:
|
| 494 |
-
|
| 495 |
-
mail.send(
|
|
|
|
| 496 |
os.remove(pdf_path)
|
| 497 |
-
report["email_status"] = "
|
|
|
|
|
|
|
| 498 |
except Exception as e:
|
| 499 |
-
logger.error(f"Failed to send email: {e}")
|
| 500 |
-
report["email_status"] = "Failed to send report to email."
|
|
|
|
|
|
|
| 501 |
return redirect(url_for("result"))
|
|
|
|
| 502 |
except Exception as e:
|
| 503 |
-
logger.error("Prediction error:
|
| 504 |
return render_template(FORM_TEMPLATE, history_plot="/training_plot.png", result={
|
| 505 |
-
"prediction": "Error",
|
| 506 |
-
"
|
| 507 |
-
"
|
| 508 |
-
"email_status": "Error occurred, no email sent."
|
| 509 |
})
|
| 510 |
|
| 511 |
@app.route("/result")
|
| 512 |
def result():
|
| 513 |
-
|
| 514 |
-
|
| 515 |
-
|
| 516 |
-
|
| 517 |
-
|
| 518 |
-
return render_template(FORM_TEMPLATE, **report)
|
| 519 |
-
except Exception as e:
|
| 520 |
-
logger.error("Error rendering result: %s", str(e))
|
| 521 |
-
return render_template(FORM_TEMPLATE, history_plot="/training_plot.png", result={
|
| 522 |
-
"prediction": "Error",
|
| 523 |
-
"confidence": "N/A",
|
| 524 |
-
"message": f"Failed to load result: {str(e)}",
|
| 525 |
-
"email_status": "N/A"
|
| 526 |
-
}, status=500)
|
| 527 |
|
| 528 |
@app.route("/download-report")
|
| 529 |
def download_report():
|
| 530 |
-
|
| 531 |
-
|
| 532 |
-
if not report:
|
| 533 |
-
return redirect(url_for("form"))
|
| 534 |
-
os.makedirs("/tmp/reports", exist_ok=True)
|
| 535 |
-
timestamp = datetime.now().strftime("%Y%m%d%H%M%S")
|
| 536 |
-
filepath = f"/tmp/reports/report_{timestamp}.pdf"
|
| 537 |
-
generate_pdf(report, filepath)
|
| 538 |
-
return send_file(filepath, as_attachment=True)
|
| 539 |
-
except Exception as e:
|
| 540 |
-
logger.error("Download report error: %s", str(e))
|
| 541 |
return redirect(url_for("form"))
|
|
|
|
|
|
|
|
|
|
|
|
|
| 542 |
|
| 543 |
-
@app.route("/
|
| 544 |
-
def
|
| 545 |
try:
|
| 546 |
-
|
| 547 |
-
if
|
| 548 |
-
return
|
| 549 |
-
|
| 550 |
-
|
| 551 |
-
return
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 552 |
except Exception as e:
|
| 553 |
-
logger.error("
|
| 554 |
-
return "", 500
|
| 555 |
|
| 556 |
-
|
|
|
|
| 557 |
try:
|
| 558 |
-
|
| 559 |
-
|
| 560 |
-
|
| 561 |
-
|
| 562 |
-
|
| 563 |
-
|
| 564 |
-
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 565 |
except Exception as e:
|
| 566 |
-
logger.error("
|
| 567 |
-
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
import os
|
| 2 |
os.environ['MPLCONFIGDIR'] = '/tmp/matplotlib'
|
| 3 |
+
from flask import Flask, render_template, request, redirect, url_for, session, send_file, jsonify
|
| 4 |
from flask_sqlalchemy import SQLAlchemy
|
| 5 |
from flask_migrate import Migrate
|
| 6 |
import tensorflow as tf
|
|
|
|
| 16 |
from datetime import datetime
|
| 17 |
import logging
|
| 18 |
from flask_mail import Mail, Message
|
|
|
|
| 19 |
|
| 20 |
app = Flask(__name__)
|
| 21 |
app.secret_key = "e3f6f40bb8b2471b9f07c4025d845be9"
|
|
|
|
| 39 |
HISTORY_PATH = "training_history.pkl"
|
| 40 |
PLOT_PATH = "/tmp/static/training_plot.png"
|
| 41 |
LOGO_PATH = "static/logo.jpg"
|
| 42 |
+
FORM_TEMPLATE = "form.html" # Use form.html for both input and results
|
| 43 |
IMG_SIZE = (224, 224)
|
| 44 |
CONFIDENCE_THRESHOLD = 0.30
|
| 45 |
|
| 46 |
label_map = {
|
| 47 |
+
0: "Melanoma", 1: "Melanocytic nevus", 2: "Basal cell carcinoma",
|
| 48 |
+
3: "Actinic keratosis", 4: "Benign keratosis", 5: "Dermatofibroma",
|
| 49 |
+
6: "Vascular lesion", 7: "Squamous cell carcinoma"
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 50 |
}
|
| 51 |
|
| 52 |
recommendations = {
|
| 53 |
"Melanoma": {
|
| 54 |
+
"solutions": ["Consult a dermatologist immediately.", "Surgical removal is typically required.", "Regular follow-up and screening for metastasis."],
|
|
|
|
|
|
|
|
|
|
|
|
|
| 55 |
"medications": ["Interferon alfa-2b", "Vemurafenib", "Dacarbazine"]
|
| 56 |
},
|
| 57 |
"Melanocytic nevus": {
|
| 58 |
+
"solutions": ["Usually benign and requires no treatment.", "Monitor for any change in shape or color."],
|
|
|
|
|
|
|
|
|
|
| 59 |
"medications": ["No medication necessary unless changes occur."]
|
| 60 |
},
|
| 61 |
"Basal cell carcinoma": {
|
| 62 |
+
"solutions": ["Surgical excision or Mohs surgery.", "Topical treatments if superficial.", "Radiation in select cases."],
|
|
|
|
|
|
|
|
|
|
|
|
|
| 63 |
"medications": ["Imiquimod cream", "Fluorouracil cream", "Vismodegib"]
|
| 64 |
},
|
| 65 |
"Actinic keratosis": {
|
| 66 |
+
"solutions": ["Cryotherapy or topical treatments.", "Avoid prolonged sun exposure.", "Use of sunscreen regularly."],
|
|
|
|
|
|
|
|
|
|
|
|
|
| 67 |
"medications": ["Fluorouracil", "Imiquimod", "Diclofenac gel"]
|
| 68 |
},
|
| 69 |
"Benign keratosis": {
|
| 70 |
+
"solutions": ["Generally harmless and often left untreated.", "Can be removed for cosmetic reasons."],
|
|
|
|
|
|
|
|
|
|
| 71 |
"medications": ["No medication required unless infected."]
|
| 72 |
},
|
| 73 |
"Dermatofibroma": {
|
| 74 |
+
"solutions": ["Benign skin growth, no treatment needed.", "Surgical removal if painful or for cosmetic reasons."],
|
|
|
|
|
|
|
|
|
|
| 75 |
"medications": ["No medication needed."]
|
| 76 |
},
|
| 77 |
"Vascular lesion": {
|
| 78 |
+
"solutions": ["Treatment depends on type (e.g., hemangioma).", "Laser therapy is commonly used.", "Observation if no complications."],
|
|
|
|
|
|
|
|
|
|
|
|
|
| 79 |
"medications": ["Beta-blockers (e.g., propranolol for hemangioma)"]
|
| 80 |
},
|
| 81 |
"Squamous cell carcinoma": {
|
| 82 |
+
"solutions": ["Surgical removal is standard.", "Follow-up for recurrence or metastasis.", "Avoid sun exposure and use sunscreen."],
|
|
|
|
|
|
|
|
|
|
|
|
|
| 83 |
"medications": ["Fluorouracil", "Cisplatin", "Imiquimod"]
|
| 84 |
},
|
| 85 |
"Low confidence": {
|
| 86 |
+
"solutions": ["The image is not confidently classified.", "Please upload a clearer image or consult a doctor."],
|
|
|
|
|
|
|
|
|
|
| 87 |
"medications": ["Not available due to low confidence."]
|
| 88 |
},
|
| 89 |
+
"Unknown": {"solutions": ["No specific guidance available."], "medications": ["N/A"]}
|
|
|
|
|
|
|
|
|
|
| 90 |
}
|
| 91 |
|
|
|
|
| 92 |
logging.basicConfig(level=logging.INFO, format='%(asctime)s - %(levelname)s - %(message)s')
|
| 93 |
logger = logging.getLogger(__name__)
|
| 94 |
|
|
|
|
| 95 |
class User(db.Model):
|
| 96 |
id = db.Column(db.Integer, primary_key=True)
|
| 97 |
name = db.Column(db.String(100), nullable=False)
|
|
|
|
| 109 |
timestamp = db.Column(db.DateTime, default=datetime.utcnow)
|
| 110 |
image_filename = db.Column(db.String(100), nullable=False)
|
| 111 |
|
|
|
|
| 112 |
model = None
|
| 113 |
model_load_error = None
|
| 114 |
def load_model():
|
| 115 |
global model, model_load_error
|
| 116 |
try:
|
| 117 |
if os.path.exists(MODEL_PATH):
|
|
|
|
| 118 |
model = tf.keras.models.load_model(MODEL_PATH, compile=False)
|
| 119 |
logger.info("Model loaded successfully")
|
| 120 |
else:
|
|
|
|
| 121 |
model_load_error = f"Model file {MODEL_PATH} not found"
|
| 122 |
+
logger.error(model_load_error)
|
| 123 |
except Exception as e:
|
| 124 |
+
model_load_error = f"Model deserialization error: {e}"
|
| 125 |
+
logger.error(f"Failed to load model: {e}")
|
| 126 |
|
|
|
|
| 127 |
load_model()
|
| 128 |
|
|
|
|
| 129 |
if os.path.exists(HISTORY_PATH):
|
| 130 |
try:
|
| 131 |
with open(HISTORY_PATH, "rb") as f:
|
| 132 |
history_dict = pickle.load(f)
|
| 133 |
if "accuracy" in history_dict and "val_accuracy" in history_dict:
|
| 134 |
os.makedirs("/tmp/static", exist_ok=True)
|
| 135 |
+
plt.figure()
|
| 136 |
plt.plot(history_dict['accuracy'], label='Train Accuracy')
|
| 137 |
plt.plot(history_dict['val_accuracy'], label='Val Accuracy')
|
| 138 |
plt.xlabel('Epochs')
|
|
|
|
| 142 |
plt.grid(True)
|
| 143 |
plt.savefig(PLOT_PATH)
|
| 144 |
plt.close()
|
|
|
|
|
|
|
|
|
|
| 145 |
except Exception as e:
|
| 146 |
+
logger.warning(f"Training history load error: {e}")
|
|
|
|
|
|
|
| 147 |
|
| 148 |
def preprocess_image(image_bytes):
|
| 149 |
+
image = Image.open(io.BytesIO(image_bytes)).convert("RGB")
|
| 150 |
+
image = image.resize(IMG_SIZE)
|
| 151 |
+
image_array = tf.keras.utils.img_to_array(image)
|
| 152 |
+
return np.expand_dims(image_array, axis=0) / 255.0
|
|
|
|
|
|
|
|
|
|
|
|
|
| 153 |
|
| 154 |
def generate_pdf(report, filepath):
|
| 155 |
+
c = canvas.Canvas(filepath, pagesize=A4)
|
| 156 |
+
width, height = A4
|
| 157 |
+
y = height - 60
|
| 158 |
+
c.setFillColor(colors.Color(0.98, 0.98, 0.99, alpha=1))
|
| 159 |
+
c.rect(0, 0, width, height, fill=1, stroke=0)
|
| 160 |
+
c.setFillColor(colors.Color(0.94, 0.96, 0.98, alpha=1))
|
| 161 |
+
c.rect(0, height-120, width, 120, fill=1, stroke=0)
|
| 162 |
+
if os.path.exists(LOGO_PATH):
|
| 163 |
+
c.drawImage(LOGO_PATH, 67, y-23, width=46, height=46, preserveAspectRatio=True, mask='auto')
|
| 164 |
+
c.setFont("Helvetica-Bold", 22)
|
| 165 |
+
c.setFillColor(colors.Color(0.2, 0.2, 0.2, alpha=1))
|
| 166 |
+
c.drawCentredString(width / 2, y + 5, "Medical Diagnosis Report")
|
| 167 |
+
c.setFont("Helvetica", 11)
|
| 168 |
+
c.setFillColor(colors.Color(0.5, 0.5, 0.5, alpha=1))
|
| 169 |
+
c.drawCentredString(width / 2, y - 15, "Dermatological Analysis")
|
| 170 |
+
c.setStrokeColor(colors.Color(0.8, 0.8, 0.8, alpha=1))
|
| 171 |
+
c.line(80, y - 35, width - 80, y - 35)
|
| 172 |
+
y -= 80
|
| 173 |
+
|
| 174 |
+
def professional_section_box(title, fields, extra_gap=20):
|
| 175 |
+
nonlocal y
|
| 176 |
+
box_height = len(fields) * 20 + 40
|
| 177 |
+
c.setFillColor(colors.white)
|
| 178 |
+
c.roundRect(40, y - box_height, width - 80, box_height, 10, fill=1, stroke=1)
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 179 |
c.setStrokeColor(colors.Color(0.9, 0.9, 0.9, alpha=1))
|
| 180 |
+
c.setFillColor(colors.Color(0.95, 0.95, 0.95, alpha=1))
|
| 181 |
+
c.roundRect(40, y - 30, width - 80, 30, 10, fill=1, stroke=0)
|
| 182 |
+
c.setFont("Helvetica-Bold", 12)
|
|
|
|
| 183 |
c.setFillColor(colors.Color(0.3, 0.3, 0.3, alpha=1))
|
| 184 |
+
c.drawString(55, y - 20, title)
|
| 185 |
+
y -= 45
|
| 186 |
+
for label, val in fields.items():
|
| 187 |
+
c.setFont("Helvetica-Bold", 9)
|
| 188 |
+
c.setFillColor(colors.Color(0.4, 0.4, 0.4, alpha=1))
|
| 189 |
+
c.drawString(55, y, f"{label}:")
|
| 190 |
+
c.setFont("Helvetica", 9)
|
| 191 |
+
c.setFillColor(colors.Color(0.2, 0.2, 0.2, alpha=1))
|
| 192 |
+
c.drawString(150, y, str(val))
|
| 193 |
+
y -= 20
|
| 194 |
+
y -= extra_gap
|
| 195 |
+
|
| 196 |
+
professional_section_box("Patient Information", {
|
| 197 |
+
"Name": report["name"], "Email": report["email"],
|
| 198 |
+
"Gender": report["gender"], "Age": f"{report['age']} years"
|
| 199 |
+
})
|
| 200 |
+
confidence_val = float(report["confidence"].replace('%', ''))
|
| 201 |
+
confidence_text = f"{report['confidence']} ({'High' if confidence_val > 85 else 'Moderate' if confidence_val > 70 else 'Low'} Confidence)"
|
| 202 |
+
professional_section_box("Diagnostic Results", {
|
| 203 |
+
"Condition": report["prediction"], "Confidence": confidence_text,
|
| 204 |
+
"Notes": report.get("message", "No additional notes")
|
| 205 |
+
})
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| 206 |
+
treatment = recommendations.get(report["prediction"], recommendations["Unknown"])
|
| 207 |
+
professional_section_box("Treatment Recommendations", {f"{i+1}. {line}": "" for i, line in enumerate(treatment["solutions"])})
|
| 208 |
+
professional_section_box("Medication Guidelines", {f"{i+1}. {line}": "" for i, line in enumerate(treatment["medications"])})
|
| 209 |
+
|
| 210 |
+
c.setFillColor(colors.Color(0.98, 0.98, 0.98, alpha=1))
|
| 211 |
+
c.roundRect(40, 40, width - 80, 70, 10, fill=1, stroke=1)
|
| 212 |
+
c.setStrokeColor(colors.Color(0.9, 0.9, 0.9, alpha=1))
|
| 213 |
+
c.setFont("Helvetica-Bold", 10)
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| 214 |
+
c.setFillColor(colors.Color(0.4, 0.4, 0.4, alpha=1))
|
| 215 |
+
c.drawString(50, 95, "Medical Disclaimer")
|
| 216 |
+
c.setFont("Helvetica", 8)
|
| 217 |
+
disclaimer = "This report is AI-generated for preliminary assessment. It is not a substitute for professional medical advice. Please consult a qualified healthcare provider."
|
| 218 |
+
c.drawString(50, 80, disclaimer[:110])
|
| 219 |
+
c.drawString(50, 70, disclaimer[110:])
|
| 220 |
+
c.save()
|
| 221 |
|
| 222 |
@app.route("/")
|
| 223 |
def home():
|
| 224 |
+
return redirect(url_for("form"))
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|
| 225 |
|
| 226 |
@app.route("/form")
|
| 227 |
def form():
|
| 228 |
+
if model_load_error:
|
| 229 |
+
return render_template(FORM_TEMPLATE, history_plot="/training_plot.png", result={
|
| 230 |
+
"prediction": "Error", "confidence": "N/A",
|
| 231 |
+
"message": f"Model loading failed: {model_load_error}", "email_status": "N/A"
|
| 232 |
+
})
|
| 233 |
+
return render_template(FORM_TEMPLATE, history_plot="/training_plot.png")
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|
| 234 |
|
| 235 |
@app.route("/training_plot.png")
|
| 236 |
def training_plot():
|
| 237 |
+
return send_file(PLOT_PATH, mimetype="image/png") if os.path.exists(PLOT_PATH) else ("", 404)
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|
| 238 |
|
| 239 |
+
@app.route("/uploads/<filename>")
|
| 240 |
+
def uploaded_file(filename):
|
| 241 |
+
return send_file(os.path.join("static/uploads", filename))
|
|
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|
| 242 |
|
| 243 |
@app.route("/predict", methods=["POST"])
|
| 244 |
def predict():
|
| 245 |
try:
|
| 246 |
if model_load_error or not model:
|
| 247 |
raise ValueError(f"Model not loaded: {model_load_error}")
|
| 248 |
+
if "image" not in request.files or not request.files["image"].filename:
|
| 249 |
raise ValueError("No image uploaded.")
|
| 250 |
+
|
| 251 |
+
image_file = request.files["image"]
|
| 252 |
+
image_bytes = image_file.read()
|
| 253 |
+
|
| 254 |
+
# Preprocess and Predict
|
| 255 |
img_array = preprocess_image(image_bytes)
|
| 256 |
prediction = model.predict(img_array)[0]
|
| 257 |
predicted_index = int(np.argmax(prediction))
|
| 258 |
confidence = float(prediction[predicted_index])
|
| 259 |
label = label_map.get(predicted_index, "Unknown") if confidence >= CONFIDENCE_THRESHOLD else "Low confidence"
|
| 260 |
+
msg = "This image is not confidently recognized. Please upload a clearer image." if confidence < CONFIDENCE_THRESHOLD else ""
|
| 261 |
+
|
| 262 |
+
# Database operations
|
| 263 |
email = request.form.get("email")
|
| 264 |
user = User.query.filter_by(email=email).first()
|
| 265 |
if not user:
|
| 266 |
user = User(name=request.form.get("name"), email=email)
|
| 267 |
db.session.add(user)
|
| 268 |
db.session.commit()
|
| 269 |
+
|
| 270 |
timestamp = datetime.now().strftime("%Y%m%d%H%M%S")
|
| 271 |
+
image_filename = f"scan_{user.id}_{timestamp}.jpg"
|
| 272 |
image_path = os.path.join("static/uploads", image_filename)
|
| 273 |
os.makedirs("static/uploads", exist_ok=True)
|
| 274 |
+
with open(image_path, "wb") as f:
|
| 275 |
+
f.write(image_bytes)
|
| 276 |
+
|
| 277 |
scan = Scan(
|
| 278 |
+
user_id=user.id, patient_name=request.form.get("name"),
|
| 279 |
+
patient_gender=request.form.get("gender"), patient_age=int(request.form.get("age")),
|
| 280 |
+
prediction=label, confidence=f"{confidence * 100:.2f}%", image_filename=image_filename
|
|
|
|
|
|
|
|
|
|
|
|
|
| 281 |
)
|
| 282 |
db.session.add(scan)
|
| 283 |
db.session.commit()
|
| 284 |
+
|
| 285 |
+
# Prepare report for session and email
|
| 286 |
report = {
|
| 287 |
+
"name": request.form.get("name"), "email": email, "gender": request.form.get("gender"),
|
| 288 |
+
"age": request.form.get("age"), "prediction": label, "confidence": f"{confidence * 100:.2f}%",
|
| 289 |
+
"message": msg, "scan_id": scan.id
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 290 |
}
|
| 291 |
+
|
| 292 |
+
# Email sending logic
|
| 293 |
try:
|
| 294 |
if not app.config['MAIL_USERNAME'] or not app.config['MAIL_PASSWORD']:
|
| 295 |
+
raise ValueError("Mail server credentials are not configured.")
|
| 296 |
+
|
| 297 |
pdf_path = f"/tmp/report_{scan.id}.pdf"
|
| 298 |
generate_pdf(report, pdf_path)
|
| 299 |
+
|
| 300 |
+
email_msg = Message('Your SnapSkin Diagnostic Report', sender=app.config['MAIL_USERNAME'], recipients=[email])
|
| 301 |
+
email_msg.body = f"Dear {report['name']},\n\nPlease find your diagnostic report attached.\n\nThank you for using SnapSkin."
|
|
|
|
|
|
|
|
|
|
| 302 |
with app.open_resource(pdf_path) as fp:
|
| 303 |
+
email_msg.attach(f"SnapSkin_Report_{scan.id}.pdf", "application/pdf", fp.read())
|
| 304 |
+
mail.send(email_msg)
|
| 305 |
+
|
| 306 |
os.remove(pdf_path)
|
| 307 |
+
report["email_status"] = "Success! The report has been sent to your email."
|
| 308 |
+
logger.info(f"Report sent to {email} for scan ID {scan.id}")
|
| 309 |
+
|
| 310 |
except Exception as e:
|
| 311 |
+
logger.error(f"Failed to send email for scan ID {scan.id}: {e}")
|
| 312 |
+
report["email_status"] = "Failed to send the report to your email. You can download it directly."
|
| 313 |
+
|
| 314 |
+
session["report"] = report
|
| 315 |
return redirect(url_for("result"))
|
| 316 |
+
|
| 317 |
except Exception as e:
|
| 318 |
+
logger.error(f"Prediction error: {e}")
|
| 319 |
return render_template(FORM_TEMPLATE, history_plot="/training_plot.png", result={
|
| 320 |
+
"prediction": "Error", "confidence": "N/A",
|
| 321 |
+
"message": f"An error occurred during prediction: {e}",
|
| 322 |
+
"email_status": "N/A"
|
|
|
|
| 323 |
})
|
| 324 |
|
| 325 |
@app.route("/result")
|
| 326 |
def result():
|
| 327 |
+
report = session.get("report")
|
| 328 |
+
if not report:
|
| 329 |
+
return redirect(url_for("form"))
|
| 330 |
+
# Pass the entire dictionary as 'result' to match the template
|
| 331 |
+
return render_template(FORM_TEMPLATE, result=report, history_plot="/training_plot.png")
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 332 |
|
| 333 |
@app.route("/download-report")
|
| 334 |
def download_report():
|
| 335 |
+
report = session.get("report")
|
| 336 |
+
if not report:
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 337 |
return redirect(url_for("form"))
|
| 338 |
+
|
| 339 |
+
filepath = f"/tmp/report_download.pdf"
|
| 340 |
+
generate_pdf(report, filepath)
|
| 341 |
+
return send_file(filepath, as_attachment=True, download_name=f"SnapSkin_Report_{report.get('scan_id', 'new')}.pdf")
|
| 342 |
|
| 343 |
+
@app.route("/api/history")
|
| 344 |
+
def api_history():
|
| 345 |
try:
|
| 346 |
+
user_email = request.args.get('email')
|
| 347 |
+
if not user_email:
|
| 348 |
+
return jsonify({"error": "Email parameter is required"}), 400
|
| 349 |
+
user = User.query.filter_by(email=user_email).first()
|
| 350 |
+
if not user:
|
| 351 |
+
return jsonify([])
|
| 352 |
+
scans = Scan.query.filter_by(user_id=user.id).order_by(Scan.timestamp.desc()).all()
|
| 353 |
+
history_data = [{
|
| 354 |
+
"id": scan.id, "prediction": scan.prediction, "confidence": scan.confidence,
|
| 355 |
+
"timestamp": scan.timestamp.strftime("%B %d, %Y at %I:%M %p"),
|
| 356 |
+
"patient_name": scan.patient_name,
|
| 357 |
+
"image_url": url_for('uploaded_file', filename=scan.image_filename, _external=True)
|
| 358 |
+
} for scan in scans]
|
| 359 |
+
return jsonify(history_data)
|
| 360 |
except Exception as e:
|
| 361 |
+
logger.error(f"API history error: {e}")
|
| 362 |
+
return jsonify({"error": "Internal server error"}), 500
|
| 363 |
|
| 364 |
+
@app.route("/api/email-report/<int:scan_id>")
|
| 365 |
+
def email_report(scan_id):
|
| 366 |
try:
|
| 367 |
+
scan = Scan.query.get(scan_id)
|
| 368 |
+
if not scan:
|
| 369 |
+
return jsonify({"error": "Report not found"}), 404
|
| 370 |
+
report_data = {
|
| 371 |
+
"name": scan.user.name, "email": scan.user.email, "gender": scan.patient_gender,
|
| 372 |
+
"age": scan.patient_age, "prediction": scan.prediction, "confidence": scan.confidence,
|
| 373 |
+
}
|
| 374 |
+
pdf_path = f"/tmp/report_{scan_id}.pdf"
|
| 375 |
+
generate_pdf(report_data, pdf_path)
|
| 376 |
+
msg = Message('Your SnapSkin Diagnostic Report', sender=app.config['MAIL_USERNAME'], recipients=[scan.user.email])
|
| 377 |
+
msg.body = f"Dear {scan.user.name},\n\nPlease find your requested diagnostic report attached.\n\nThank you for using SnapSkin."
|
| 378 |
+
with app.open_resource(pdf_path) as fp:
|
| 379 |
+
msg.attach(f"SnapSkin_Report_{scan_id}.pdf", "application/pdf", fp.read())
|
| 380 |
+
mail.send(msg)
|
| 381 |
+
os.remove(pdf_path)
|
| 382 |
+
return jsonify({"success": True, "message": f"Report sent to {scan.user.email}"})
|
| 383 |
except Exception as e:
|
| 384 |
+
logger.error(f"Failed to resend email for scan {scan_id}: {e}")
|
| 385 |
+
return jsonify({"success": False, "message": "Failed to send email."}), 500
|
| 386 |
+
|
| 387 |
+
if __name__ == "__main__":
|
| 388 |
+
with app.app_context():
|
| 389 |
+
db.create_all()
|
| 390 |
+
app.run(host="0.0.0.0", port=7860)
|