Update app.py
Browse files
app.py
CHANGED
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@@ -225,20 +225,19 @@ def inference_pipeline(img, thresh_b=0.5, thresh_v=0.5, seg_thresh=0.5):
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title = "Chest X-ray: UNet segmentation + 2 binary classifiers"
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desc =
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def encode_image(img_path):
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with open(img_path, "rb") as img:
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return "data:image/png;base64," + base64.b64encode(img.read()).decode()
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example_samples = [
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[
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[
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[
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]
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with gr.Blocks(title=title) as demo:
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gr.Markdown(f"### {title}")
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gr.Markdown(desc)
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@@ -247,9 +246,12 @@ with gr.Blocks(title=title) as demo:
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fn=inference_pipeline,
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inputs=[
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gr.Image(type="numpy", label="Upload chest X-ray (RGB or grayscale)"),
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gr.Slider(minimum=0.1, maximum=0.9, step=0.01, value=0.5,
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gr.Slider(minimum=0.1, maximum=0.9, step=0.01, value=0.5,
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],
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outputs=[
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gr.Label(num_top_classes=1, label="Prediction"),
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@@ -266,8 +268,8 @@ with gr.Blocks(title=title) as demo:
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gr.Dataframe(
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headers=["Image", "Label"],
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value=example_samples,
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interactive=False,
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wrap=True,
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row_count=(len(example_samples), "fixed"),
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col_count=(2, "fixed")
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)
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title = "Chest X-ray: UNet segmentation + 2 binary classifiers"
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desc = (
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"Pipeline: UNet -> mask lungs -> two binary classifiers (Normal vs Bacterial, Normal vs Viral). "
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"If both classifiers fire, the stronger probability is chosen (fallback). Thresholds adjustable."
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)
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example_samples = [
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["images/NORMAL.jpeg", "NORMAL"],
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["images/VIRAL.jpeg", "VIRAL"],
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["images/BACT.jpeg", "BACTERIAL"],
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]
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with gr.Blocks(title=title) as demo:
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gr.Markdown(f"### {title}")
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gr.Markdown(desc)
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fn=inference_pipeline,
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inputs=[
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gr.Image(type="numpy", label="Upload chest X-ray (RGB or grayscale)"),
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gr.Slider(minimum=0.1, maximum=0.9, step=0.01, value=0.5,
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label="Bacterial threshold (thresh_b)"),
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gr.Slider(minimum=0.1, maximum=0.9, step=0.01, value=0.5,
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label="Viral threshold (thresh_v)"),
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gr.Slider(minimum=0.1, maximum=0.9, step=0.01, value=0.5,
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label="Segmentation mask threshold (seg_thresh)")
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],
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outputs=[
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gr.Label(num_top_classes=1, label="Prediction"),
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gr.Dataframe(
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headers=["Image", "Label"],
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value=example_samples,
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datatype=["image", "str"],
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interactive=False,
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row_count=(len(example_samples), "fixed"),
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col_count=(2, "fixed")
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)
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