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Delete app.py
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app.py
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import gradio as gr
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import json
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import pandas as pd
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# ----------------------------
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# LOAD DATA
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# ----------------------------
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with open("data.json", "r") as f:
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df = json.load(f)
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# ----------------------------
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# IMPROVED SEPSIS SCORING
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# ----------------------------
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def sepsis_score(patient):
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score = 0
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findings = []
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visits = patient.get("visits", [])
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if not visits:
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return "Low", ["No visit data"], []
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latest = visits[-1]
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labs = latest.get("labs", [])
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for lab in labs:
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name = lab.get("lab_name")
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value = lab.get("value")
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if name == "WBC":
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if value > 12:
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score += 1
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findings.append(f"WBC elevated ({value})")
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if name == "Glucose":
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if value > 140:
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score += 1
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findings.append(f"Hyperglycemia ({value})")
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if name == "Creatinine":
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if value > 1.3:
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score += 1
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findings.append(f"Renal stress ({value})")
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# More realistic tiers
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if score == 0:
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severity = "Low"
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elif score == 1:
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severity = "Elevated"
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elif score == 2:
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severity = "High"
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else:
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severity = "Critical"
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return severity, findings, labs
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# ----------------------------
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# EXPLANATION (GEMMA-READY STYLE)
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# ----------------------------
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def explain(severity, findings):
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return f"""
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Deterministic Sepsis Evaluation
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Severity Classification: {severity}
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Clinical Indicators:
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{", ".join(findings) if findings else "No abnormal indicators detected"}
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Interpretation:
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This assessment is derived from structured laboratory thresholds and rule-based evaluation.
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This output is intended for validation and testing purposes only.
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Not for clinical use.
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"""
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# ----------------------------
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# ANALYZE FUNCTION
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# ----------------------------
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def analyze(index):
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index = int(index)
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patient = df[index]
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severity, findings, labs = sepsis_score(patient)
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explanation = explain(severity, findings)
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demo = patient.get("demographics", {})
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# Patient summary
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summary_df = pd.DataFrame([{
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"Patient Index": index,
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"Age": demo.get("age"),
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"Sex": demo.get("sex"),
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"Conditions": ", ".join(patient.get("conditions", []))
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}])
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# Labs table
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labs_rows = []
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for lab in labs:
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labs_rows.append({
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"Lab": lab.get("lab_name"),
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"Value": lab.get("value")
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})
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labs_df = pd.DataFrame(labs_rows)
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return summary_df, labs_df, severity, explanation
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# ----------------------------
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# UI
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# ----------------------------
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with gr.Blocks() as app:
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gr.Markdown("# HipAAsynth Lab")
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gr.Markdown("Deterministic Clinical Validation Environment")
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with gr.Row():
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index = gr.Slider(
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minimum=0,
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maximum=len(df) - 1,
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step=1,
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value=0,
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label="Patient Selector"
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)
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btn = gr.Button("Run Evaluation")
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with gr.Row():
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severity_out = gr.Textbox(label="Severity Classification")
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with gr.Row():
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summary_out = gr.Dataframe(label="Patient Summary")
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with gr.Row():
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labs_out = gr.Dataframe(label="Latest Laboratory Results")
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with gr.Row():
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explanation_out = gr.Textbox(label="System Explanation")
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btn.click(
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fn=analyze,
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inputs=index,
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outputs=[summary_out, labs_out, severity_out, explanation_out]
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)
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app.launch()
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