import marimo __generated_with = "0.11.2" app = marimo.App(width="medium") @app.cell def _(): import marimo as mo import pycek_public as cek lab = cek.crystal_violet(make_plots=True) return cek, lab, mo @app.cell def _(mo): mo.md( """ # Crystal Violet Lab This notebook mimics a kinetics laboratory experiment, where a UV-Vis spectrophotometer is used to measure the absorbance as the reaction between crystal violet and hydroxide proceeds. The absorbance versus time data can then be used to determine the rate of the reaction with respect to both crystal violet and hydroxide ions. ## Objectives 1. Determine the reaction order with respect to CV 2. Determine the reaction order with respect to hydroxide 3. Determine the rate constant for the overall reaction 4. Determine the activation energy ## Instructions 1. Type your student ID 2. Select the volumes of the CV solution, the hydroxide solution and DI water to use 3. Select the temperature of the experiment 4. Click "Run Experiment" 5. Perform two sets of at least three experiments each: - constant [CV] while the [OH$^-$] is varied - constant [OH$^-$] while the [CV] is varied 6. Obtain another set of data where the temperature is changed and compute the activation energy and pre-exponential factor ___ """ ) return @app.cell def _(lab, mo): def set_ID(value): return cek.set_ID(mo, lab, value) student_ID = mo.ui.text(value="", label="Student ID:", on_change=set_ID) def set_fname(value): lab.output_file = value exp_ID = mo.ui.text(value="Automatic", label="Output file:", on_change=set_fname) cv_volume = mo.ui.number( start=0, stop=100, step=1, value=None, label="Volume of CV solution (mL)" ) oh_volume = mo.ui.number( start=0, stop=100, step=1, value=None, label="Volume of OH solution (mL)" ) h2o_volume = mo.ui.number( start=0, stop=100, step=1, value=None, label="Volume of DI water (mL)" ) temperature = mo.ui.number( start=0, stop=100, step=1, value=25, label="Temperature (C)" ) run_button = mo.ui.run_button(label="Run Experiment") reset_button = mo.ui.run_button(label="Reset Counter") # Create download button using marimo's download function mo.vstack( [ student_ID, exp_ID, cv_volume, oh_volume, h2o_volume, temperature, run_button, reset_button, ] ) return ( cv_volume, exp_ID, h2o_volume, oh_volume, reset_button, run_button, set_ID, set_fname, student_ID, temperature, ) @app.cell def _( cek, cv_volume, h2o_volume, lab, mo, oh_volume, reset_button, run_button, temperature, ): if reset_button.value: lab.ID = 0 lab._set_filename(None) image = "" message = "" download_button = "" if run_button.value: mo.stop( not student_ID.value.isdigit(), mo.md(f"### Invalid Student ID: {student_ID.value}"), ) cv_vol = cv_volume.value oh_vol = oh_volume.value h2o_vol = h2o_volume.value lab.set_parameters( volumes={"cv": cv_vol, "oh": oh_vol, "h2o": h2o_vol}, temperature=temperature.value + 273.15, ) data = lab.create_data_for_lab() file_content = lab.write_data_to_string() fname = lab.output_file if not fname: fname = lab.filename_gen.random if not fname.endswith('.csv'): fname += '.csv' message = f"### Running Experiment\n" for k, v in lab.metadata.items(): message += f"####{k} = {v}\n" message += f"#### File created = {fname}\n" download_button = mo.download( file_content, filename=fname, label=f"Download {fname}", ) plot = cek.plotting() image = plot.quick_plot(scatter=data, output="marimo") mo.hstack([mo.vstack([mo.md(message), download_button]), image]) return ( cv_vol, data, download_button, file_content, fname, h2o_vol, image, k, message, oh_vol, plot, v, ) if __name__ == "__main__": app.run()